BLASTX nr result

ID: Coptis21_contig00026109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026109
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29967.3| unnamed protein product [Vitis vinifera]              178   5e-43
ref|XP_002281244.1| PREDICTED: uncharacterized protein LOC100267...   178   5e-43
ref|XP_002323349.1| predicted protein [Populus trichocarpa] gi|2...   174   9e-42
ref|XP_002308345.1| predicted protein [Populus trichocarpa] gi|2...   171   7e-41
ref|XP_003553637.1| PREDICTED: uncharacterized protein LOC100800...   168   4e-40

>emb|CBI29967.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  178 bits (451), Expect = 5e-43
 Identities = 81/109 (74%), Positives = 93/109 (85%)
 Frame = -3

Query: 328 GCFVLWQMVPDKWLIELVVTEHKVIAGSDGNVAWRHTPWLGAHTAKGGVRPLRRALQGLD 149
           GCFV+WQMVPDKWLIELVV  HKV+AGSDGNVAWRHTPW+GAH AKGGVRPLRR LQGLD
Sbjct: 131 GCFVMWQMVPDKWLIELVVGGHKVVAGSDGNVAWRHTPWIGAHAAKGGVRPLRRVLQGLD 190

Query: 148 PVTVAAVFSTADFMGEKSMWDEDCFALKLSLGDTTLTERSDSTADIIKH 2
           P+ V+AVFS+A +MGEK +   DCF LKLS   T L +RSD+TA++IKH
Sbjct: 191 PLAVSAVFSSAQYMGEKRIMGVDCFVLKLSADHTDLADRSDNTAEMIKH 239


>ref|XP_002281244.1| PREDICTED: uncharacterized protein LOC100267519 [Vitis vinifera]
          Length = 362

 Score =  178 bits (451), Expect = 5e-43
 Identities = 81/109 (74%), Positives = 93/109 (85%)
 Frame = -3

Query: 328 GCFVLWQMVPDKWLIELVVTEHKVIAGSDGNVAWRHTPWLGAHTAKGGVRPLRRALQGLD 149
           GCFV+WQMVPDKWLIELVV  HKV+AGSDGNVAWRHTPW+GAH AKGGVRPLRR LQGLD
Sbjct: 131 GCFVMWQMVPDKWLIELVVGGHKVVAGSDGNVAWRHTPWIGAHAAKGGVRPLRRVLQGLD 190

Query: 148 PVTVAAVFSTADFMGEKSMWDEDCFALKLSLGDTTLTERSDSTADIIKH 2
           P+ V+AVFS+A +MGEK +   DCF LKLS   T L +RSD+TA++IKH
Sbjct: 191 PLAVSAVFSSAQYMGEKRIMGVDCFVLKLSADHTDLADRSDNTAEMIKH 239


>ref|XP_002323349.1| predicted protein [Populus trichocarpa] gi|222867979|gb|EEF05110.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  174 bits (440), Expect = 9e-42
 Identities = 79/114 (69%), Positives = 93/114 (81%)
 Frame = -3

Query: 343 SAPHDGCFVLWQMVPDKWLIELVVTEHKVIAGSDGNVAWRHTPWLGAHTAKGGVRPLRRA 164
           +A   GCFV+WQM P+KWLIELVV  HKV+AGSDGNVAWRHTPWLG+H AKGGVRPLRRA
Sbjct: 78  TAAQKGCFVMWQMAPNKWLIELVVDGHKVVAGSDGNVAWRHTPWLGSHAAKGGVRPLRRA 137

Query: 163 LQGLDPVTVAAVFSTADFMGEKSMWDEDCFALKLSLGDTTLTERSDSTADIIKH 2
           LQGLDP+ ++AVFS + +MGEK +   DCF LKLS     L +RSDSTA++IKH
Sbjct: 138 LQGLDPMAISAVFSPSQYMGEKCISGMDCFVLKLSADQADLADRSDSTAEMIKH 191


>ref|XP_002308345.1| predicted protein [Populus trichocarpa] gi|222854321|gb|EEE91868.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  171 bits (432), Expect = 7e-41
 Identities = 78/109 (71%), Positives = 89/109 (81%)
 Frame = -3

Query: 328 GCFVLWQMVPDKWLIELVVTEHKVIAGSDGNVAWRHTPWLGAHTAKGGVRPLRRALQGLD 149
           GCFV+WQM P+KWLIELVV  HKV+AGSDGNVAWRHTPWL +H AKGGVRPLRRALQGLD
Sbjct: 129 GCFVMWQMAPNKWLIELVVDGHKVVAGSDGNVAWRHTPWLASHAAKGGVRPLRRALQGLD 188

Query: 148 PVTVAAVFSTADFMGEKSMWDEDCFALKLSLGDTTLTERSDSTADIIKH 2
           P+ ++AVFS A +MGEK +   DCF LKLS     L  RSDSTA++IKH
Sbjct: 189 PMAISAVFSPAQYMGEKRVSGTDCFVLKLSADQADLAARSDSTAEMIKH 237


>ref|XP_003553637.1| PREDICTED: uncharacterized protein LOC100800778 [Glycine max]
          Length = 353

 Score =  168 bits (426), Expect = 4e-40
 Identities = 76/109 (69%), Positives = 89/109 (81%)
 Frame = -3

Query: 328 GCFVLWQMVPDKWLIELVVTEHKVIAGSDGNVAWRHTPWLGAHTAKGGVRPLRRALQGLD 149
           GCFV+WQM+PDKW IEL V  HKV+AGSDG VAWRHTPWLGAH AKGG+RPLRRA+QGLD
Sbjct: 122 GCFVIWQMLPDKWQIELAVAGHKVVAGSDGTVAWRHTPWLGAHAAKGGIRPLRRAVQGLD 181

Query: 148 PVTVAAVFSTADFMGEKSMWDEDCFALKLSLGDTTLTERSDSTADIIKH 2
           P+ V+AVFS A +MGEK +   DCF LKLS     L +RSD+TA++IKH
Sbjct: 182 PLAVSAVFSAAQYMGEKQISGIDCFVLKLSPDQKDLVDRSDNTAEMIKH 230


Top