BLASTX nr result

ID: Coptis21_contig00026092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026092
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A0AT30.1|NLTP3_LENCU RecName: Full=Non-specific lipid-transfe...    55   1e-05

>sp|A0AT30.1|NLTP3_LENCU RecName: Full=Non-specific lipid-transfer protein 3; Short=LTP3;
           Flags: Precursor gi|60735412|gb|AAX35808.1| lipid
           transfer protein 3 precursor [Lens culinaris]
          Length = 118

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
 Frame = -1

Query: 420 RSMKRTVMCLSALLVTLQLMFSQVSYLPEVEPFLYPCNPFLTTHS*TAQGCCAGADPLKG 241
           RSM    + L   +V +  M         V   L PC P+LT  +     CCAG   L  
Sbjct: 3   RSMNLACVALVMCMVVIAPMAEAAVSCGTVTGDLAPCIPYLTGGAGPTDSCCAGVKKLLA 62

Query: 240 VAITSPVKCMACNCVKQAA-RFNNF-------LQAKCSTTISLSVSRNIDCNT 106
            A T+  +  ACNC+K AA   NN        L  KC+  I   +S   +CNT
Sbjct: 63  AAPTTADRQAACNCLKTAAGNINNLNPGNAAALPGKCNVNIPYKISTTTNCNT 115


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