BLASTX nr result

ID: Coptis21_contig00026083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026083
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516740.1| leucine-rich repeat containing protein, puta...    58   7e-07
ref|XP_002446300.1| hypothetical protein SORBIDRAFT_06g013840 [S...    56   3e-06
ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trich...    56   3e-06
ref|XP_002335004.1| cc-nbs-lrr resistance protein [Populus trich...    55   5e-06
ref|XP_002263296.2| PREDICTED: putative disease resistance prote...    55   6e-06

>ref|XP_002516740.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223544113|gb|EEF45638.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1104

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/74 (41%), Positives = 49/74 (66%)
 Frame = -3

Query: 222 LKKKENLRSLALVFSLERQDAATTQENRKRIDSVLDGLQPHTNLAELMIQAYEGNNFPLW 43
           L +KE+L+SL+L +S E +D++   E       VLDG QPH+NL +L I+ Y+G+ F  W
Sbjct: 709 LMQKEDLKSLSLCWSREGEDSSNLSEE------VLDGCQPHSNLKKLSIRKYQGSKFASW 762

Query: 42  LSSNNTYLPNLVKL 1
           ++  +  LPNLV++
Sbjct: 763 MT--DLSLPNLVEI 774


>ref|XP_002446300.1| hypothetical protein SORBIDRAFT_06g013840 [Sorghum bicolor]
           gi|241937483|gb|EES10628.1| hypothetical protein
           SORBIDRAFT_06g013840 [Sorghum bicolor]
          Length = 793

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
 Frame = -3

Query: 222 LKKKENLRSLALVFSLERQDAATTQENRKRI--DSVLDGLQPHTNLAELMIQAYEGNNFP 49
           LK K  L  L L +  +  D     E+ K +  + VL+GL+PH NL  L I+ YEG  FP
Sbjct: 536 LKDKHCLNDLTLQWHDDGIDIEDEGEDSKDVADEQVLEGLKPHVNLQVLTIRGYEGRRFP 595

Query: 48  LWLSSNNTYLPNLVKL 1
            W+  ++  LPNLV L
Sbjct: 596 AWMQGSSPSLPNLVTL 611


>ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222844635|gb|EEE82182.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1075

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/74 (44%), Positives = 46/74 (62%)
 Frame = -3

Query: 222 LKKKENLRSLALVFSLERQDAATTQENRKRIDSVLDGLQPHTNLAELMIQAYEGNNFPLW 43
           L+ K  L SL L ++  R  +   QEN    + VL+GLQPH+NL +LMI  Y G+ FP W
Sbjct: 710 LELKTALLSLTLSWNGNRTKSVI-QENS---EEVLEGLQPHSNLKKLMIWGYGGSRFPNW 765

Query: 42  LSSNNTYLPNLVKL 1
           + + N  LPNLV++
Sbjct: 766 MMNLNMTLPNLVEM 779


>ref|XP_002335004.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832589|gb|EEE71066.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 851

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
 Frame = -3

Query: 222 LKKKENLRSLALVF---SLERQDAATTQENRKRIDSVLDGLQPHTNLAELMIQAYEGNNF 52
           LK K  L SL L +      +Q  +  QEN    + VL+GLQPH+NL +L I  Y G+ F
Sbjct: 653 LKLKTALLSLTLSWHGNGAPQQRKSVIQENN---EEVLEGLQPHSNLKKLKIWGYGGSRF 709

Query: 51  PLWLSSNNTYLPNLVKL 1
           P W+ + N  LPNLV++
Sbjct: 710 PNWMMNLNMTLPNLVEM 726


>ref|XP_002263296.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 1394

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/75 (38%), Positives = 45/75 (60%)
 Frame = -3

Query: 225 VLKKKENLRSLALVFSLERQDAATTQENRKRIDSVLDGLQPHTNLAELMIQAYEGNNFPL 46
           +LK+K+ L+SL L ++   QD     +      SV++GLQPH +L ++ I  Y G  FP 
Sbjct: 716 ILKEKQYLQSLRLEWNRWGQDGGDEGDQ-----SVMEGLQPHQHLKDIFIDGYGGTEFPS 770

Query: 45  WLSSNNTYLPNLVKL 1
           W+   N+ LPNL+K+
Sbjct: 771 WMM--NSLLPNLIKI 783


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