BLASTX nr result
ID: Coptis21_contig00026053
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00026053
(290 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002311067.1| predicted protein [Populus trichocarpa] gi|2... 88 1e-20
ref|XP_002331904.1| predicted protein [Populus trichocarpa] gi|2... 86 1e-20
ref|XP_002309132.1| predicted protein [Populus trichocarpa] gi|2... 90 1e-20
ref|XP_004160745.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR... 86 3e-20
ref|XP_004138566.1| PREDICTED: probable LRR receptor-like serine... 86 3e-20
>ref|XP_002311067.1| predicted protein [Populus trichocarpa] gi|222850887|gb|EEE88434.1|
predicted protein [Populus trichocarpa]
Length = 1025
Score = 88.2 bits (217), Expect(2) = 1e-20
Identities = 40/73 (54%), Positives = 56/73 (76%)
Frame = +2
Query: 5 SLQYMNVSENKMAGEIPSTIGGCSSLENLYLQGNFFQGALPHSLSYLQGLQVLDVSRNNI 184
+L Y N+S N+++GEIP T+G C SLE LY++GN FQG +P SLS L+ LQ+L++S NN+
Sbjct: 517 NLGYFNLSHNRLSGEIPRTLGSCVSLEFLYMEGNLFQGPIPESLSSLRALQILNLSHNNL 576
Query: 185 TGMIPKELENLRL 223
+G IPK L L+L
Sbjct: 577 SGEIPKFLAELKL 589
Score = 36.6 bits (83), Expect(2) = 1e-20
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +1
Query: 223 TSLNLSFNNIEGEVPQNGIF 282
TSL+LSFNN+EGEVP GIF
Sbjct: 591 TSLDLSFNNLEGEVPVQGIF 610
Score = 60.1 bits (144), Expect(2) = 7e-08
Identities = 28/69 (40%), Positives = 45/69 (65%)
Frame = +2
Query: 2 KSLQYMNVSENKMAGEIPSTIGGCSSLENLYLQGNFFQGALPHSLSYLQGLQVLDVSRNN 181
++L + + NK++G IPS++G +SL +YL N QG +P SL Q L +L + +NN
Sbjct: 419 QNLGVLALGGNKISGNIPSSMGNITSLLEVYLSANNLQGRIPSSLGNCQNLLILHLDQNN 478
Query: 182 ITGMIPKEL 208
++G IPKE+
Sbjct: 479 LSGSIPKEV 487
Score = 21.2 bits (43), Expect(2) = 7e-08
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 232 NLSFNNIEGEVPQ 270
NLS N + GE+P+
Sbjct: 522 NLSHNRLSGEIPR 534
Score = 57.8 bits (138), Expect = 9e-07
Identities = 27/70 (38%), Positives = 41/70 (58%)
Frame = +2
Query: 8 LQYMNVSENKMAGEIPSTIGGCSSLENLYLQGNFFQGALPHSLSYLQGLQVLDVSRNNIT 187
LQ N + G IPS+ G S++ ++ GN+ QG +P+S+ L+ L+ RNN+T
Sbjct: 174 LQVFFFQFNYLVGGIPSSFGNLSAIIQIFGAGNYLQGGIPNSIGQLKSLKSFSFGRNNMT 233
Query: 188 GMIPKELENL 217
GMIP + NL
Sbjct: 234 GMIPPSIYNL 243
Score = 55.1 bits (131), Expect = 6e-06
Identities = 30/81 (37%), Positives = 45/81 (55%)
Frame = +2
Query: 2 KSLQYMNVSENKMAGEIPSTIGGCSSLENLYLQGNFFQGALPHSLSYLQGLQVLDVSRNN 181
++L+ M N++ G IPS IG L+ L L+ N G +P+S+ LQ L VL + N
Sbjct: 371 ENLKRMTFGRNQIRGSIPSGIGNLIGLDTLGLEMNQLTGVIPNSIGKLQNLGVLALGGNK 430
Query: 182 ITGMIPKELENLRLQV*TYLS 244
I+G IP + N+ + YLS
Sbjct: 431 ISGNIPSSMGNITSLLEVYLS 451
>ref|XP_002331904.1| predicted protein [Populus trichocarpa] gi|222874576|gb|EEF11707.1|
predicted protein [Populus trichocarpa]
Length = 1008
Score = 86.3 bits (212), Expect(2) = 1e-20
Identities = 39/74 (52%), Positives = 58/74 (78%)
Frame = +2
Query: 5 SLQYMNVSENKMAGEIPSTIGGCSSLENLYLQGNFFQGALPHSLSYLQGLQVLDVSRNNI 184
+L YM++S+N+++GEIP+++G C SLE+LYL GNF QG + SL L+ LQ L++S NN+
Sbjct: 510 TLGYMDISKNRLSGEIPASLGSCESLEHLYLDGNFLQGPISESLRSLRALQDLNLSHNNL 569
Query: 185 TGMIPKELENLRLQ 226
+G IPK L +L+LQ
Sbjct: 570 SGQIPKFLGDLKLQ 583
Score = 38.5 bits (88), Expect(2) = 1e-20
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +1
Query: 205 IGEPTFTSLNLSFNNIEGEVPQNGIFQN 288
+G+ SL+LSFN++EGEVP +G+F+N
Sbjct: 577 LGDLKLQSLDLSFNDLEGEVPMHGVFEN 604
Score = 60.5 bits (145), Expect = 1e-07
Identities = 32/70 (45%), Positives = 39/70 (55%)
Frame = +2
Query: 8 LQYMNVSENKMAGEIPSTIGGCSSLENLYLQGNFFQGALPHSLSYLQGLQVLDVSRNNIT 187
LQ + + N +GEIPS I CS+L L L+GN G LP L L LQV +NN+
Sbjct: 119 LQTLILGNNSFSGEIPSNISHCSNLLKLNLEGNNLTGNLPAGLGSLSKLQVFSFRKNNLD 178
Query: 188 GMIPKELENL 217
G IP ENL
Sbjct: 179 GKIPLSFENL 188
Score = 59.3 bits (142), Expect = 3e-07
Identities = 28/62 (45%), Positives = 43/62 (69%)
Frame = +2
Query: 23 VSENKMAGEIPSTIGGCSSLENLYLQGNFFQGALPHSLSYLQGLQVLDVSRNNITGMIPK 202
++ENK++G IPS++G +SL + N QG++P SL Q L VL +S+NN++G IPK
Sbjct: 419 LNENKLSGSIPSSLGNITSLMQINFDQNNLQGSIPPSLGNCQNLLVLALSQNNLSGPIPK 478
Query: 203 EL 208
E+
Sbjct: 479 EV 480
>ref|XP_002309132.1| predicted protein [Populus trichocarpa] gi|222855108|gb|EEE92655.1|
predicted protein [Populus trichocarpa]
Length = 1034
Score = 89.7 bits (221), Expect(2) = 1e-20
Identities = 40/73 (54%), Positives = 60/73 (82%)
Frame = +2
Query: 5 SLQYMNVSENKMAGEIPSTIGGCSSLENLYLQGNFFQGALPHSLSYLQGLQVLDVSRNNI 184
+L Y++VSENK+ G+IPS++G C +LE L++QGNFF+GA+P S S L+GL+ +D+SRNN+
Sbjct: 520 NLGYLDVSENKLYGQIPSSLGSCVTLEKLHMQGNFFEGAIPPSFSSLRGLRDMDLSRNNL 579
Query: 185 TGMIPKELENLRL 223
+G IP+ L+ L L
Sbjct: 580 SGQIPQFLKRLAL 592
Score = 34.7 bits (78), Expect(2) = 1e-20
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1
Query: 226 SLNLSFNNIEGEVPQNGIFQN 288
SLNLSFN+ EGEVP+ G F N
Sbjct: 594 SLNLSFNHFEGEVPREGAFLN 614
Score = 63.9 bits (154), Expect = 1e-08
Identities = 32/72 (44%), Positives = 49/72 (68%)
Frame = +2
Query: 2 KSLQYMNVSENKMAGEIPSTIGGCSSLENLYLQGNFFQGALPHSLSYLQGLQVLDVSRNN 181
K LQ +++SENK++G IPS++G + L +LQ N G++P S L+ LQ LD+S+N
Sbjct: 422 KMLQRLDLSENKLSGLIPSSLGNITQLFEFHLQKNQIMGSIPSSFGNLKYLQNLDLSQNL 481
Query: 182 ITGMIPKELENL 217
++G IPKE+ L
Sbjct: 482 LSGTIPKEVMGL 493
Score = 60.1 bits (144), Expect = 2e-07
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +2
Query: 8 LQYMNVSENKMAGEIPSTIGGCSSLENLYLQGNFFQGALPHSLSYLQGLQVLDVSRNNIT 187
L+Y+N S N +GEIP+ + GCSSL L L N G +P+ L LQ L+ + + NN+
Sbjct: 129 LKYINFSNNSFSGEIPANLSGCSSLLMLRLGFNKLTGQIPYQLGSLQKLERVQLHYNNLN 188
Query: 188 GMIPKELENL 217
G +P L N+
Sbjct: 189 GSVPDSLGNI 198
>ref|XP_004160745.1| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like
serine/threonine-protein kinase At3g47570-like [Cucumis
sativus]
Length = 1023
Score = 85.5 bits (210), Expect(2) = 3e-20
Identities = 39/82 (47%), Positives = 62/82 (75%)
Frame = +2
Query: 5 SLQYMNVSENKMAGEIPSTIGGCSSLENLYLQGNFFQGALPHSLSYLQGLQVLDVSRNNI 184
+L Y+++S+N + G IPST+ C+SLE+LYL GNF +G +P SLS L+G++ LD+SRNN+
Sbjct: 521 NLGYLHISDNMLTGVIPSTLSACTSLEDLYLDGNFLEGPIPESLSSLRGIEELDLSRNNL 580
Query: 185 TGMIPKELENLRLQV*TYLSIT 250
+G IP L+ +V +YL+++
Sbjct: 581 SGKIPTYLQ--EFEVLSYLNLS 600
Score = 37.7 bits (86), Expect(2) = 3e-20
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +1
Query: 229 LNLSFNNIEGEVPQNGIFQN 288
LNLSFNN+EGEVP G+F+N
Sbjct: 597 LNLSFNNLEGEVPTQGVFKN 616
Score = 56.6 bits (135), Expect = 2e-06
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +2
Query: 8 LQYMNVSENKMAGEIPSTIGGCSSLENLYLQGNFFQGALPHSLSYLQGLQVLDVSRNNIT 187
L +N+ N GEIP IG S L+ L + N+F G +P ++S LQ + + +NN+T
Sbjct: 106 LTTLNLPNNSFGGEIPQEIGSLSRLQELDFRNNYFVGEIPITISNCSQLQYIGLLKNNLT 165
Query: 188 GMIPKEL 208
G++P EL
Sbjct: 166 GVLPMEL 172
>ref|XP_004138566.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At3g47570-like [Cucumis sativus]
Length = 1023
Score = 85.5 bits (210), Expect(2) = 3e-20
Identities = 39/82 (47%), Positives = 62/82 (75%)
Frame = +2
Query: 5 SLQYMNVSENKMAGEIPSTIGGCSSLENLYLQGNFFQGALPHSLSYLQGLQVLDVSRNNI 184
+L Y+++S+N + G IPST+ C+SLE+LYL GNF +G +P SLS L+G++ LD+SRNN+
Sbjct: 521 NLGYLHISDNMLTGVIPSTLSACTSLEDLYLDGNFLEGPIPESLSSLRGIEELDLSRNNL 580
Query: 185 TGMIPKELENLRLQV*TYLSIT 250
+G IP L+ +V +YL+++
Sbjct: 581 SGKIPTYLQ--EFEVLSYLNLS 600
Score = 37.7 bits (86), Expect(2) = 3e-20
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +1
Query: 229 LNLSFNNIEGEVPQNGIFQN 288
LNLSFNN+EGEVP G+F+N
Sbjct: 597 LNLSFNNLEGEVPTQGVFKN 616
Score = 55.8 bits (133), Expect = 4e-06
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +2
Query: 8 LQYMNVSENKMAGEIPSTIGGCSSLENLYLQGNFFQGALPHSLSYLQGLQVLDVSRNNIT 187
L +N+ N GEIP IG S L+ L + N+F G +P ++S LQ + + NN+T
Sbjct: 106 LTTLNLPNNSFGGEIPQEIGSLSRLQELDFRNNYFVGEIPITISNCSQLQYIGLLNNNLT 165
Query: 188 GMIPKEL 208
G++P EL
Sbjct: 166 GVLPMEL 172