BLASTX nr result

ID: Coptis21_contig00026045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026045
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564348.1| uncharacterized protein [Arabidopsis thaliana] ...   195   5e-48
gb|AAM67088.1| unknown [Arabidopsis thaliana]                         192   3e-47
ref|XP_002890852.1| hypothetical protein ARALYDRAFT_473232 [Arab...   189   2e-46
gb|AAO42861.1| At1g30130 [Arabidopsis thaliana] gi|110743324|dbj...   188   6e-46
ref|XP_002277705.1| PREDICTED: uncharacterized protein LOC100254...   187   8e-46

>ref|NP_564348.1| uncharacterized protein [Arabidopsis thaliana]
           gi|42571697|ref|NP_973939.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|12321635|gb|AAG50861.1|AC074176_10 unknown protein
           [Arabidopsis thaliana] gi|222423586|dbj|BAH19762.1|
           AT1G30130 [Arabidopsis thaliana]
           gi|332193061|gb|AEE31182.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332193062|gb|AEE31183.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 311

 Score =  195 bits (495), Expect = 5e-48
 Identities = 91/145 (62%), Positives = 116/145 (80%)
 Frame = -3

Query: 435 PFQYIYHLIFQSKQEEGQNPELVFYQGSVYHERKRPVRHAFRYDVRYALLDLDAGPNTLP 256
           PF+++ H +  S+     +P + FY+G+V+H+R RPVRH+FRY VRYAL DLD   NT P
Sbjct: 25  PFRFLLHRLLPSRA--AVDPNVSFYEGTVWHDRLRPVRHSFRYSVRYALFDLDKAINTPP 82

Query: 255 SSFFENHLSAQQARQITTTTGPVFLLTIPPSVGYEQNPLSVYYCYDIEGSAPRLKKCIAE 76
                +H SA +AR+++ TTGP+FLLTIPPSVGYEQNPLS+YYCYD+EGS+ RL KCIA+
Sbjct: 83  -----DHFSADEARRVSRTTGPIFLLTIPPSVGYEQNPLSLYYCYDLEGSSKRLSKCIAQ 137

Query: 75  VTNTPWGERVSFVFNPDSDLVAKPL 1
           VTNTPWGERV+FVF+P+SDLVAK L
Sbjct: 138 VTNTPWGERVTFVFDPESDLVAKSL 162


>gb|AAM67088.1| unknown [Arabidopsis thaliana]
          Length = 311

 Score =  192 bits (489), Expect = 3e-47
 Identities = 90/145 (62%), Positives = 115/145 (79%)
 Frame = -3

Query: 435 PFQYIYHLIFQSKQEEGQNPELVFYQGSVYHERKRPVRHAFRYDVRYALLDLDAGPNTLP 256
           PF+++ H +  S+     +P + FY+G+V+H+R RPVRH+FRY VRYAL DLD    T P
Sbjct: 25  PFRFLLHRLLPSRA--AVDPNVSFYEGTVWHDRLRPVRHSFRYSVRYALFDLDKAITTPP 82

Query: 255 SSFFENHLSAQQARQITTTTGPVFLLTIPPSVGYEQNPLSVYYCYDIEGSAPRLKKCIAE 76
                +H SA +AR+++ TTGP+FLLTIPPSVGYEQNPLS+YYCYD+EGS+ RL KCIA+
Sbjct: 83  -----DHFSADEARRVSRTTGPIFLLTIPPSVGYEQNPLSLYYCYDLEGSSKRLSKCIAQ 137

Query: 75  VTNTPWGERVSFVFNPDSDLVAKPL 1
           VTNTPWGERV+FVF+P+SDLVAK L
Sbjct: 138 VTNTPWGERVTFVFDPESDLVAKSL 162


>ref|XP_002890852.1| hypothetical protein ARALYDRAFT_473232 [Arabidopsis lyrata subsp.
           lyrata] gi|297336694|gb|EFH67111.1| hypothetical protein
           ARALYDRAFT_473232 [Arabidopsis lyrata subsp. lyrata]
          Length = 309

 Score =  189 bits (481), Expect = 2e-46
 Identities = 89/145 (61%), Positives = 115/145 (79%)
 Frame = -3

Query: 435 PFQYIYHLIFQSKQEEGQNPELVFYQGSVYHERKRPVRHAFRYDVRYALLDLDAGPNTLP 256
           PF+++ H +  S+     +P + FY+G+V+H+R RPVRH+FRY VRYAL DLD    T P
Sbjct: 25  PFRFLLHRLLPSRA--AVDPNVSFYEGTVWHDRLRPVRHSFRYSVRYALFDLDKAITTPP 82

Query: 255 SSFFENHLSAQQARQITTTTGPVFLLTIPPSVGYEQNPLSVYYCYDIEGSAPRLKKCIAE 76
                +HLSA +AR+++ TTGP++LLTIPPSVGYEQNPLS+YYCYD+E S+ RL KCIA+
Sbjct: 83  -----DHLSADEARRVSHTTGPIYLLTIPPSVGYEQNPLSLYYCYDLEESSKRLSKCIAQ 137

Query: 75  VTNTPWGERVSFVFNPDSDLVAKPL 1
           VTNTPWGERV+FVF+P+SDLVAK L
Sbjct: 138 VTNTPWGERVTFVFDPESDLVAKSL 162


>gb|AAO42861.1| At1g30130 [Arabidopsis thaliana] gi|110743324|dbj|BAE99550.1|
           hypothetical protein [Arabidopsis thaliana]
          Length = 311

 Score =  188 bits (477), Expect = 6e-46
 Identities = 89/145 (61%), Positives = 114/145 (78%)
 Frame = -3

Query: 435 PFQYIYHLIFQSKQEEGQNPELVFYQGSVYHERKRPVRHAFRYDVRYALLDLDAGPNTLP 256
           PF+++ H +  S+     +P + FY+G+V+H+R RPVRH+FRY VRYAL DLD   NT P
Sbjct: 25  PFRFLLHRLLPSRA--AVDPNVSFYEGTVWHDRLRPVRHSFRYSVRYALFDLDKAINTPP 82

Query: 255 SSFFENHLSAQQARQITTTTGPVFLLTIPPSVGYEQNPLSVYYCYDIEGSAPRLKKCIAE 76
                +H SA +AR+++ TTG +FLLTIPPSVGYEQNPLS+YYCYD+EGS+ RL KCIA+
Sbjct: 83  -----DHFSADEARRVSRTTGSIFLLTIPPSVGYEQNPLSLYYCYDLEGSSKRLSKCIAQ 137

Query: 75  VTNTPWGERVSFVFNPDSDLVAKPL 1
           VTNTPWGERV+FVF+ +SDLVAK L
Sbjct: 138 VTNTPWGERVTFVFDLESDLVAKSL 162


>ref|XP_002277705.1| PREDICTED: uncharacterized protein LOC100254825 [Vitis vinifera]
           gi|147866339|emb|CAN79921.1| hypothetical protein
           VITISV_002110 [Vitis vinifera]
           gi|297740736|emb|CBI30918.3| unnamed protein product
           [Vitis vinifera]
          Length = 318

 Score =  187 bits (476), Expect = 8e-46
 Identities = 89/134 (66%), Positives = 108/134 (80%)
 Frame = -3

Query: 402 SKQEEGQNPELVFYQGSVYHERKRPVRHAFRYDVRYALLDLDAGPNTLPSSFFENHLSAQ 223
           S    G++P +  Y+G+V+HER+RPV H+FRY VRYAL+D+D+ PN LP     +HLS  
Sbjct: 41  SSAATGEDP-VSLYEGTVWHERRRPVHHSFRYAVRYALVDIDSAPNVLP-----DHLSGD 94

Query: 222 QARQITTTTGPVFLLTIPPSVGYEQNPLSVYYCYDIEGSAPRLKKCIAEVTNTPWGERVS 43
           +AR+I  TTGPVFLLTIPPSVGYEQNPLS+YYCYD+  S   LK+CIAEVTNTPWGERV+
Sbjct: 95  EARRIAGTTGPVFLLTIPPSVGYEQNPLSLYYCYDLAASTQNLKQCIAEVTNTPWGERVT 154

Query: 42  FVFNPDSDLVAKPL 1
           FVFNP+ DLVAKPL
Sbjct: 155 FVFNPNFDLVAKPL 168


Top