BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026043
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat...   189   5e-46
emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera]   187   2e-45
gb|ADN33897.1| pentatricopeptide (PPR) repeat-containing protein...   184   2e-44
ref|XP_002511392.1| pentatricopeptide repeat-containing protein,...   182   4e-44
ref|XP_004139961.1| PREDICTED: putative pentatricopeptide repeat...   180   2e-43

>ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g03510 [Vitis vinifera] gi|298205226|emb|CBI17285.3|
           unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  189 bits (479), Expect = 5e-46
 Identities = 96/153 (62%), Positives = 115/153 (75%), Gaps = 1/153 (0%)
 Frame = +2

Query: 2   MELRRVRPDGIAFLGVLKACSHAGLADEALKYFGQM-QIYGVEPRSEHYACLVDALSRSG 178
           ME+ +V+PDGI FLGVLKACSHAGLADEAL YFG+M + YGVE  S+HY+C+VDALSR+G
Sbjct: 275 MEMAKVQPDGITFLGVLKACSHAGLADEALGYFGRMCKDYGVEASSDHYSCVVDALSRAG 334

Query: 179 RLREAYKVIKEMPVKXXXXXXXXXXXXCRNCEEVELAELAANILFELEPNNAANYVLLAS 358
           RL EAY++I+ MPVK            CR   EVELAE+A   LFELEP+NAANYVLLA 
Sbjct: 335 RLYEAYEIIQGMPVKSTAKTWGALLGACRTYGEVELAEIAGRALFELEPDNAANYVLLAR 394

Query: 359 IYAGVGRFAEADKVRKKMKERFVKTLPGGSWVI 457
           IYA VGR  EA ++R++M E  VK  PG SWV+
Sbjct: 395 IYASVGRHEEAQRMRREMNEMGVKAAPGSSWVV 427


>emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera]
          Length = 513

 Score =  187 bits (474), Expect = 2e-45
 Identities = 97/169 (57%), Positives = 120/169 (71%), Gaps = 1/169 (0%)
 Frame = +2

Query: 2   MELRRVRPDGIAFLGVLKACSHAGLADEALKYFGQM-QIYGVEPRSEHYACLVDALSRSG 178
           ME+ +V+PDGI FLGVLKACSHAGLADEAL YFG+M + YGVE  S+HY+C+VDALSR+G
Sbjct: 275 MEMAKVQPDGITFLGVLKACSHAGLADEALGYFGRMCKDYGVEASSDHYSCVVDALSRAG 334

Query: 179 RLREAYKVIKEMPVKXXXXXXXXXXXXCRNCEEVELAELAANILFELEPNNAANYVLLAS 358
           RL EAY++I+ MPVK            CR   EVELAE+A   LFELEP+NAANYVLLA 
Sbjct: 335 RLYEAYEIIQGMPVKATAKTWGALLGACRTYGEVELAEIAGRALFELEPDNAANYVLLAR 394

Query: 359 IYAGVGRFAEADKVRKKMKERFVKTLPGGSWVIDHD*SNCRRNVHPYSI 505
           IYA VGR  EA ++R++M E  VK  PG SW+ +        ++HP  +
Sbjct: 395 IYASVGRHEEAQRMRREMNEMGVKAAPGSSWMTNAMAKRGVYHLHPIRV 443


>gb|ADN33897.1| pentatricopeptide (PPR) repeat-containing protein [Cucumis melo
           subsp. melo]
          Length = 391

 Score =  184 bits (466), Expect = 2e-44
 Identities = 91/156 (58%), Positives = 114/156 (73%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2   MELRRVRPDGIAFLGVLKACSHAGLADEALKYFGQMQI-YGVEPRSEHYACLVDALSRSG 178
           MEL +V+PD I F+GVLKACSH GLADEAL YF +MQ  YG++  S+HY+CLVD LSR+G
Sbjct: 236 MELSKVQPDAITFIGVLKACSHVGLADEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAG 295

Query: 179 RLREAYKVIKEMPVKXXXXXXXXXXXXCRNCEEVELAELAANILFELEPNNAANYVLLAS 358
           RL EA+ +I+EMPV+            CR   E+ELAE+A   LFE+EP NAANYVLLA 
Sbjct: 296 RLHEAHDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAK 355

Query: 359 IYAGVGRFAEADKVRKKMKERFVKTLPGGSWVIDHD 466
           +YA VGR  EA ++R++MKER VK +PG SWV+  D
Sbjct: 356 MYASVGRHEEAQRMRREMKERRVKVVPGSSWVVYQD 391


>ref|XP_002511392.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550507|gb|EEF51994.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score =  182 bits (463), Expect = 4e-44
 Identities = 93/153 (60%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
 Frame = +2

Query: 2   MELRRVRPDGIAFLGVLKACSHAGLADEALKYFGQMQI-YGVEPRSEHYACLVDALSRSG 178
           MEL +V+PD I FL VLKACSHAGLADEAL YF +MQ  Y ++  S+HY+CLVD LSR+G
Sbjct: 289 MELAKVQPDDITFLAVLKACSHAGLADEALDYFTKMQEGYRLQAVSDHYSCLVDVLSRAG 348

Query: 179 RLREAYKVIKEMPVKXXXXXXXXXXXXCRNCEEVELAELAANILFELEPNNAANYVLLAS 358
           RL EAYKVI+EMPVK            CR   E+ELAE+    LFE+EP+N ANYVLLA 
Sbjct: 349 RLYEAYKVIQEMPVKVTAKAWGALLGACRTYGEIELAEIVGRALFEIEPDNPANYVLLAR 408

Query: 359 IYAGVGRFAEADKVRKKMKERFVKTLPGGSWVI 457
           IYA VGR+ EA ++R++MKER VK  PG SWV+
Sbjct: 409 IYASVGRYDEAQRIRREMKERGVKVSPGSSWVV 441


>ref|XP_004139961.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g03510-like [Cucumis sativus]
          Length = 391

 Score =  180 bits (456), Expect = 2e-43
 Identities = 90/156 (57%), Positives = 113/156 (72%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2   MELRRVRPDGIAFLGVLKACSHAGLADEALKYFGQMQI-YGVEPRSEHYACLVDALSRSG 178
           ME  +V+PD I F+GVLKACSH GLA+EAL YF +MQ  YG++  S+HY+CLVD LSR+G
Sbjct: 236 MESCKVQPDEITFIGVLKACSHVGLANEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAG 295

Query: 179 RLREAYKVIKEMPVKXXXXXXXXXXXXCRNCEEVELAELAANILFELEPNNAANYVLLAS 358
           RL EAY +I+EMPV+            CR   E+ELAE+A   LFE+EP NAANYVLLA 
Sbjct: 296 RLHEAYDIIREMPVRVTAKAWGALLGACRIYGELELAEIAGKALFEIEPENAANYVLLAK 355

Query: 359 IYAGVGRFAEADKVRKKMKERFVKTLPGGSWVIDHD 466
           +YA VGR  EA ++R++MKER VK +PG SWV+  D
Sbjct: 356 MYASVGRHEEAQRMRREMKERRVKVVPGSSWVVYQD 391