BLASTX nr result

ID: Coptis21_contig00026032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026032
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27180.3| unnamed protein product [Vitis vinifera]              250   1e-64
ref|XP_002276547.1| PREDICTED: chaperonin 60 subunit alpha 2, ch...   250   1e-64
ref|XP_004145436.1| PREDICTED: chaperonin 60 subunit alpha 2, ch...   246   2e-63
tpg|DAA39656.1| TPA: hypothetical protein ZEAMMB73_693223 [Zea m...   242   3e-62
ref|XP_003576845.1| PREDICTED: ruBisCO large subunit-binding pro...   241   5e-62

>emb|CBI27180.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  250 bits (639), Expect = 1e-64
 Identities = 134/192 (69%), Positives = 152/192 (79%)
 Frame = -1

Query: 578 RISFDKDCRNGLLAGINKLADAVSVTLGPKGRNVIIDGPDIPKVINDGVTIAQAIELADS 399
           RISFD++CR GL AGI+KLADAVS+TLGPKGRNVI+      KVINDGVTIA+AIEL+D+
Sbjct: 47  RISFDRECREGLQAGIDKLADAVSLTLGPKGRNVILSEAGTLKVINDGVTIARAIELSDA 106

Query: 398 IENAGAKLIQEVARKTNDSAGDGTTTAIILAREMVRFGLLAVASGANPTSLKKGMDKTVQ 219
           IENAGA L+QEVA KTND AGDGTTTAIILAREM++ GLL VA GANP  LKKGMDKTV+
Sbjct: 107 IENAGATLMQEVASKTNDVAGDGTTTAIILAREMIKSGLLVVAFGANPIGLKKGMDKTVR 166

Query: 218 ELIKVLKSKCRPVMGSEDIKAVASISAGNDEFVGNLIAKAIGKIGSDGXXXXXXXXXXXX 39
           EL+KVLK K  PV G +DI+AVASISAGND+FVGNLIA+AI KIG DG            
Sbjct: 167 ELVKVLKKKSFPVKGRDDIRAVASISAGNDDFVGNLIAEAIDKIGPDGVISIESSSSSET 226

Query: 38  XXXXXEGMKVDK 3
                EGMK+DK
Sbjct: 227 SVIIEEGMKIDK 238


>ref|XP_002276547.1| PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic-like [Vitis
           vinifera]
          Length = 602

 Score =  250 bits (639), Expect = 1e-64
 Identities = 134/192 (69%), Positives = 152/192 (79%)
 Frame = -1

Query: 578 RISFDKDCRNGLLAGINKLADAVSVTLGPKGRNVIIDGPDIPKVINDGVTIAQAIELADS 399
           RISFD++CR GL AGI+KLADAVS+TLGPKGRNVI+      KVINDGVTIA+AIEL+D+
Sbjct: 66  RISFDRECREGLQAGIDKLADAVSLTLGPKGRNVILSEAGTLKVINDGVTIARAIELSDA 125

Query: 398 IENAGAKLIQEVARKTNDSAGDGTTTAIILAREMVRFGLLAVASGANPTSLKKGMDKTVQ 219
           IENAGA L+QEVA KTND AGDGTTTAIILAREM++ GLL VA GANP  LKKGMDKTV+
Sbjct: 126 IENAGATLMQEVASKTNDVAGDGTTTAIILAREMIKSGLLVVAFGANPIGLKKGMDKTVR 185

Query: 218 ELIKVLKSKCRPVMGSEDIKAVASISAGNDEFVGNLIAKAIGKIGSDGXXXXXXXXXXXX 39
           EL+KVLK K  PV G +DI+AVASISAGND+FVGNLIA+AI KIG DG            
Sbjct: 186 ELVKVLKKKSFPVKGRDDIRAVASISAGNDDFVGNLIAEAIDKIGPDGVISIESSSSSET 245

Query: 38  XXXXXEGMKVDK 3
                EGMK+DK
Sbjct: 246 SVIIEEGMKIDK 257


>ref|XP_004145436.1| PREDICTED: chaperonin 60 subunit alpha 2, chloroplastic-like
           [Cucumis sativus]
          Length = 587

 Score =  246 bits (629), Expect = 2e-63
 Identities = 133/192 (69%), Positives = 150/192 (78%)
 Frame = -1

Query: 578 RISFDKDCRNGLLAGINKLADAVSVTLGPKGRNVIIDGPDIPKVINDGVTIAQAIELADS 399
           RISF K+CR  LLAGI+KLADAVSVTLGPKGRNVI+      KV+NDGVTIA+AIEL+D+
Sbjct: 51  RISFGKECRGALLAGIDKLADAVSVTLGPKGRNVILSEQKTLKVVNDGVTIAKAIELSDA 110

Query: 398 IENAGAKLIQEVARKTNDSAGDGTTTAIILAREMVRFGLLAVASGANPTSLKKGMDKTVQ 219
           IENAG  LIQEVA K ND AGDGTTTAIILAREM++ GLLAV+ GA+P SLKKGMDKTV+
Sbjct: 111 IENAGVVLIQEVASKMNDLAGDGTTTAIILAREMIKSGLLAVSFGADPVSLKKGMDKTVK 170

Query: 218 ELIKVLKSKCRPVMGSEDIKAVASISAGNDEFVGNLIAKAIGKIGSDGXXXXXXXXXXXX 39
           ELIKVLK K  PV G +DIKAVA IS+GNDE+VGNLIA+AI KIG DG            
Sbjct: 171 ELIKVLKKKSTPVQGKDDIKAVAMISSGNDEYVGNLIAEAIEKIGPDGVISIESSKSSET 230

Query: 38  XXXXXEGMKVDK 3
                EGMK+DK
Sbjct: 231 SVIIEEGMKIDK 242


>tpg|DAA39656.1| TPA: hypothetical protein ZEAMMB73_693223 [Zea mays]
          Length = 585

 Score =  242 bits (618), Expect = 3e-62
 Identities = 125/191 (65%), Positives = 150/191 (78%)
 Frame = -1

Query: 575 ISFDKDCRNGLLAGINKLADAVSVTLGPKGRNVIIDGPDIPKVINDGVTIAQAIELADSI 396
           IS  + CR GL AGI+KLADAVSVTLGPKGRNV+ID  D+PKVINDGVTIA+AIEL +++
Sbjct: 41  ISTGEACRRGLAAGIDKLADAVSVTLGPKGRNVVIDQDDVPKVINDGVTIAKAIELPNAL 100

Query: 395 ENAGAKLIQEVARKTNDSAGDGTTTAIILAREMVRFGLLAVASGANPTSLKKGMDKTVQE 216
           E+AGA L+QE+A KTN + GDGTTTAI+LARE++  GLLAVA+GANP +L++G+DK V E
Sbjct: 101 EHAGATLLQEIASKTNSAVGDGTTTAIVLAREIINLGLLAVATGANPVALRRGIDKAVHE 160

Query: 215 LIKVLKSKCRPVMGSEDIKAVASISAGNDEFVGNLIAKAIGKIGSDGXXXXXXXXXXXXX 36
           LIK+LKSKC PV   EDIKAVASIS+GNDE+VGNLIA A+ KIG DG             
Sbjct: 161 LIKILKSKCIPVSTKEDIKAVASISSGNDEYVGNLIADALEKIGPDGIIKIESSSSIYTT 220

Query: 35  XXXXEGMKVDK 3
               EGMK+DK
Sbjct: 221 VEVQEGMKIDK 231


>ref|XP_003576845.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
           chloroplastic-like [Brachypodium distachyon]
          Length = 590

 Score =  241 bits (616), Expect = 5e-62
 Identities = 127/191 (66%), Positives = 148/191 (77%)
 Frame = -1

Query: 575 ISFDKDCRNGLLAGINKLADAVSVTLGPKGRNVIIDGPDIPKVINDGVTIAQAIELADSI 396
           IS    CR GL AGINKLADAV+VTLGPKGRNV+ID  D+PKVINDGVTIA+AIEL +++
Sbjct: 48  ISSGDACRRGLAAGINKLADAVAVTLGPKGRNVVIDQDDVPKVINDGVTIAKAIELPNAL 107

Query: 395 ENAGAKLIQEVARKTNDSAGDGTTTAIILAREMVRFGLLAVASGANPTSLKKGMDKTVQE 216
           E+AGA L+QEVA KTN + GDGTTTAIILARE++  GLLAVA+GANP +L+KG+DK V E
Sbjct: 108 EHAGAMLLQEVASKTNSTVGDGTTTAIILAREIINLGLLAVANGANPVALRKGIDKAVHE 167

Query: 215 LIKVLKSKCRPVMGSEDIKAVASISAGNDEFVGNLIAKAIGKIGSDGXXXXXXXXXXXXX 36
           LI +LK+KC PV   EDIKAVASISAGNDE+VGNLIA A+ KIG DG             
Sbjct: 168 LIGILKTKCIPVSTKEDIKAVASISAGNDEYVGNLIADALEKIGPDGIIKIESSSSIYTT 227

Query: 35  XXXXEGMKVDK 3
               EGMK+DK
Sbjct: 228 VEVQEGMKIDK 238


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