BLASTX nr result

ID: Coptis21_contig00026015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026015
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263968.1| PREDICTED: transmembrane protein 18 [Vitis v...   260   3e-67
ref|NP_001237116.1| uncharacterized protein LOC100527513 [Glycin...   248   1e-63
ref|XP_003518332.1| PREDICTED: transmembrane protein 18-like [Gl...   245   6e-63
ref|XP_002526846.1| conserved hypothetical protein [Ricinus comm...   244   1e-62
gb|AFK46982.1| unknown [Medicago truncatula]                          243   4e-62

>ref|XP_002263968.1| PREDICTED: transmembrane protein 18 [Vitis vinifera]
           gi|297739539|emb|CBI29721.3| unnamed protein product
           [Vitis vinifera]
          Length = 163

 Score =  260 bits (664), Expect = 3e-67
 Identities = 118/163 (72%), Positives = 145/163 (88%)
 Frame = -3

Query: 754 MEELKTVMNEHMDQMSDLVEKFTAELRSGFQPAVDNFLGFFHAINWKEPWLVGLISFHVS 575
           ME+LK  MNEHMD M+DLV+KFTAELR+GFQPA DNF+GFFHAI+WKEPWL+GL+SFH +
Sbjct: 1   MEDLKMAMNEHMDLMADLVQKFTAELRTGFQPAYDNFIGFFHAIDWKEPWLIGLLSFHFA 60

Query: 574 LLLLIFISRKNVNFQMLLFLMSLTGVYFAEKINTALRNNWKSFAGQNYFDSHGVFVSVLW 395
           LLL+ F+SRK++NFQM LFL++L+GVY AE IN  L +NWK FAGQNYFD  G+F+SVLW
Sbjct: 61  LLLVTFLSRKHINFQMCLFLLALSGVYLAETINKFLGSNWKKFAGQNYFDPRGLFLSVLW 120

Query: 394 SGPLLCISILILMNTLFSLCQLIVKWKKAELRHRARTSRNKQD 266
           SGPLL I+I+IL+NTLFSLC+L++KWK+AELRHRA  +RNKQD
Sbjct: 121 SGPLLLIAIIILLNTLFSLCRLLIKWKRAELRHRALLARNKQD 163


>ref|NP_001237116.1| uncharacterized protein LOC100527513 [Glycine max]
           gi|255632518|gb|ACU16609.1| unknown [Glycine max]
          Length = 163

 Score =  248 bits (633), Expect = 1e-63
 Identities = 113/163 (69%), Positives = 139/163 (85%)
 Frame = -3

Query: 754 MEELKTVMNEHMDQMSDLVEKFTAELRSGFQPAVDNFLGFFHAINWKEPWLVGLISFHVS 575
           MEELK+ M EHMD M+DLV+K +++LR+GF+PA DNF+GFFHAI+WKEPWL+GL+ FHV 
Sbjct: 1   MEELKSAMEEHMDLMADLVQKLSSDLRAGFRPAYDNFIGFFHAIDWKEPWLMGLLGFHVV 60

Query: 574 LLLLIFISRKNVNFQMLLFLMSLTGVYFAEKINTALRNNWKSFAGQNYFDSHGVFVSVLW 395
           LLL+  ISRK  NFQM LFL++L GVYFAE +N  L  NWKSF+ QNYFD  G+F+SVLW
Sbjct: 61  LLLVAIISRKKTNFQMFLFLLTLAGVYFAESLNRFLGKNWKSFSSQNYFDPRGLFMSVLW 120

Query: 394 SGPLLCISILILMNTLFSLCQLIVKWKKAELRHRARTSRNKQD 266
           SGPLL IS++IL+NTLFSLC +IV+WK+AELRHRAR +RNKQD
Sbjct: 121 SGPLLVISMIILINTLFSLCYMIVRWKRAELRHRARAARNKQD 163


>ref|XP_003518332.1| PREDICTED: transmembrane protein 18-like [Glycine max]
          Length = 163

 Score =  245 bits (626), Expect = 6e-63
 Identities = 111/163 (68%), Positives = 139/163 (85%)
 Frame = -3

Query: 754 MEELKTVMNEHMDQMSDLVEKFTAELRSGFQPAVDNFLGFFHAINWKEPWLVGLISFHVS 575
           MEEL++ M EHMD M+DLV+KF+++LR+GF+PA DNF+GFFHAI+WKEPWL+GL+ FHV 
Sbjct: 1   MEELRSAMEEHMDLMADLVQKFSSDLRAGFRPAYDNFIGFFHAIDWKEPWLMGLLGFHVV 60

Query: 574 LLLLIFISRKNVNFQMLLFLMSLTGVYFAEKINTALRNNWKSFAGQNYFDSHGVFVSVLW 395
           LLL+  ISRK  NFQM LFL++L GVY AE +N  L  NWK+F+ QNYFD  G+F+SVLW
Sbjct: 61  LLLVAIISRKKTNFQMFLFLLTLAGVYLAESLNRFLGKNWKNFSSQNYFDPSGLFMSVLW 120

Query: 394 SGPLLCISILILMNTLFSLCQLIVKWKKAELRHRARTSRNKQD 266
           SGPLL IS++IL+NTLFSLC +IV+WK+AELRHRAR +RNKQD
Sbjct: 121 SGPLLVISMIILINTLFSLCYMIVRWKRAELRHRARAARNKQD 163


>ref|XP_002526846.1| conserved hypothetical protein [Ricinus communis]
           gi|223533850|gb|EEF35581.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score =  244 bits (623), Expect = 1e-62
 Identities = 112/163 (68%), Positives = 139/163 (85%)
 Frame = -3

Query: 754 MEELKTVMNEHMDQMSDLVEKFTAELRSGFQPAVDNFLGFFHAINWKEPWLVGLISFHVS 575
           M+EL++   +H +QM+DLV+K ++ELRSG +PA DNF+GFFHAI+W EPWL+GLI+FHV 
Sbjct: 1   MDELRSAFEDHFEQMADLVQKLSSELRSGLRPAYDNFIGFFHAIDWTEPWLMGLIAFHVM 60

Query: 574 LLLLIFISRKNVNFQMLLFLMSLTGVYFAEKINTALRNNWKSFAGQNYFDSHGVFVSVLW 395
           LLLL  ISRK+VNFQM LFL++L GVYFAE++N  L +NWKSFA QNYFD  G+F+S LW
Sbjct: 61  LLLLAIISRKHVNFQMCLFLLALGGVYFAERLNKVLGDNWKSFASQNYFDPQGLFLSALW 120

Query: 394 SGPLLCISILILMNTLFSLCQLIVKWKKAELRHRARTSRNKQD 266
           SGPLL I+I+IL+NTLFSLC LIV+WK+AELRHRAR S NKQD
Sbjct: 121 SGPLLIIAIIILINTLFSLCYLIVRWKRAELRHRARLSHNKQD 163


>gb|AFK46982.1| unknown [Medicago truncatula]
          Length = 165

 Score =  243 bits (619), Expect = 4e-62
 Identities = 112/165 (67%), Positives = 140/165 (84%)
 Frame = -3

Query: 760 LTMEELKTVMNEHMDQMSDLVEKFTAELRSGFQPAVDNFLGFFHAINWKEPWLVGLISFH 581
           ++++ELK+ M  H+D MSDLV+K ++ELRS  +PA DNFLGFFHAI+WKEPWL+GL++FH
Sbjct: 1   MSIDELKSAMEGHVDLMSDLVQKISSELRSNLRPAKDNFLGFFHAIDWKEPWLLGLLTFH 60

Query: 580 VSLLLLIFISRKNVNFQMLLFLMSLTGVYFAEKINTALRNNWKSFAGQNYFDSHGVFVSV 401
           V LLL I ISRKN NFQM LFL++L GVY AE++N+ L  NWKSF+ QNYFD  GVF+SV
Sbjct: 61  VLLLLAIIISRKNTNFQMCLFLLALAGVYLAERLNSILGENWKSFSSQNYFDPSGVFMSV 120

Query: 400 LWSGPLLCISILILMNTLFSLCQLIVKWKKAELRHRARTSRNKQD 266
           LWSGPLL  S++IL+NTLFSLC LIVKWK+AELRHRAR +R+KQ+
Sbjct: 121 LWSGPLLAFSMIILINTLFSLCYLIVKWKRAELRHRARAARSKQE 165


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