BLASTX nr result

ID: Coptis21_contig00026000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00026000
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609630.1| Elongation factor EF-2 [Medicago truncatula]...   127   1e-27
ref|XP_003553334.1| PREDICTED: elongation factor Tu GTP-binding ...   125   5e-27
ref|XP_002515715.1| translation elongation factor, putative [Ric...   123   1e-26
ref|XP_004139777.1| PREDICTED: ribosome assembly protein 1-like ...   122   4e-26
ref|XP_004139776.1| PREDICTED: ribosome assembly protein 1-like ...   122   4e-26

>ref|XP_003609630.1| Elongation factor EF-2 [Medicago truncatula]
            gi|355510685|gb|AES91827.1| Elongation factor EF-2
            [Medicago truncatula]
          Length = 1026

 Score =  127 bits (319), Expect = 1e-27
 Identities = 61/67 (91%), Positives = 62/67 (92%)
 Frame = -3

Query: 366  SHWETLEEDPFFVPKTEEEIEEFGDGSSVLPNTARKLVDYVRRHKGLPVEEKVVQHGAKQ 187
            SHWE L EDPFFVPKTEEEIEEFGDGSSVLPNTARKL+D VRR KGLPVEEKVVQHG KQ
Sbjct: 960  SHWEALHEDPFFVPKTEEEIEEFGDGSSVLPNTARKLIDAVRRRKGLPVEEKVVQHGTKQ 1019

Query: 186  RTLARKV 166
            RTLARKV
Sbjct: 1020 RTLARKV 1026


>ref|XP_003553334.1| PREDICTED: elongation factor Tu GTP-binding domain-containing protein
            1-like [Glycine max]
          Length = 1022

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/67 (89%), Positives = 62/67 (92%)
 Frame = -3

Query: 366  SHWETLEEDPFFVPKTEEEIEEFGDGSSVLPNTARKLVDYVRRHKGLPVEEKVVQHGAKQ 187
            SHWE L EDPFFVPKTEEEIEEFGDGSSVLPNTARKL++ VRR KGLPVEEKVVQHG KQ
Sbjct: 956  SHWEALPEDPFFVPKTEEEIEEFGDGSSVLPNTARKLINAVRRRKGLPVEEKVVQHGTKQ 1015

Query: 186  RTLARKV 166
            RTLARKV
Sbjct: 1016 RTLARKV 1022


>ref|XP_002515715.1| translation elongation factor, putative [Ricinus communis]
            gi|223545152|gb|EEF46662.1| translation elongation
            factor, putative [Ricinus communis]
          Length = 1028

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/67 (88%), Positives = 61/67 (91%)
 Frame = -3

Query: 366  SHWETLEEDPFFVPKTEEEIEEFGDGSSVLPNTARKLVDYVRRHKGLPVEEKVVQHGAKQ 187
            SHWE L EDPFFVPKTEEEIEEFGDGSSVLPNT+RKL+D VRR KGLPVEEKVVQH  KQ
Sbjct: 962  SHWEALPEDPFFVPKTEEEIEEFGDGSSVLPNTSRKLIDAVRRRKGLPVEEKVVQHATKQ 1021

Query: 186  RTLARKV 166
            RTLARKV
Sbjct: 1022 RTLARKV 1028


>ref|XP_004139777.1| PREDICTED: ribosome assembly protein 1-like isoform 2 [Cucumis
            sativus] gi|449502885|ref|XP_004161770.1| PREDICTED:
            ribosome assembly protein 1-like [Cucumis sativus]
          Length = 1019

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/67 (86%), Positives = 61/67 (91%)
 Frame = -3

Query: 366  SHWETLEEDPFFVPKTEEEIEEFGDGSSVLPNTARKLVDYVRRHKGLPVEEKVVQHGAKQ 187
            SHWE L EDPFF+PKTEEE+EEFGDGSSVLPNTARKL+D VRR KGLPVEEKVVQH  KQ
Sbjct: 953  SHWEELCEDPFFIPKTEEELEEFGDGSSVLPNTARKLIDTVRRRKGLPVEEKVVQHATKQ 1012

Query: 186  RTLARKV 166
            RTLARKV
Sbjct: 1013 RTLARKV 1019


>ref|XP_004139776.1| PREDICTED: ribosome assembly protein 1-like isoform 1 [Cucumis
            sativus]
          Length = 1035

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/67 (86%), Positives = 61/67 (91%)
 Frame = -3

Query: 366  SHWETLEEDPFFVPKTEEEIEEFGDGSSVLPNTARKLVDYVRRHKGLPVEEKVVQHGAKQ 187
            SHWE L EDPFF+PKTEEE+EEFGDGSSVLPNTARKL+D VRR KGLPVEEKVVQH  KQ
Sbjct: 969  SHWEELCEDPFFIPKTEEELEEFGDGSSVLPNTARKLIDTVRRRKGLPVEEKVVQHATKQ 1028

Query: 186  RTLARKV 166
            RTLARKV
Sbjct: 1029 RTLARKV 1035


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