BLASTX nr result

ID: Coptis21_contig00025985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025985
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270086.1| PREDICTED: uncharacterized protein LOC100255...   105   3e-21
ref|XP_003618966.1| hypothetical protein MTR_6g029390 [Medicago ...   105   3e-21
ref|XP_002319695.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
ref|XP_003618028.1| hypothetical protein MTR_5g098200 [Medicago ...    95   5e-18
emb|CBI29943.3| unnamed protein product [Vitis vinifera]               94   9e-18

>ref|XP_002270086.1| PREDICTED: uncharacterized protein LOC100255594 [Vitis vinifera]
           gi|296084605|emb|CBI25626.3| unnamed protein product
           [Vitis vinifera]
          Length = 88

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/88 (59%), Positives = 60/88 (68%)
 Frame = -2

Query: 358 MCPLRFILVFLSATLAGYFAWRTVRXXXXXXXXXXXXDATAVLPKQKQEFSFKKVVQDGF 179
           MCPLRFILVF SA LAGYFAWRTVR            +   V  K KQE +FK++++DGF
Sbjct: 1   MCPLRFILVFFSAVLAGYFAWRTVRSSQETGLSLEDSNLENVPSKDKQELNFKRMIRDGF 60

Query: 178 YIFVDMASGRYLWRNLRVNNESEKAKGC 95
           + FVDMASGRYLWRNLR    +EK K C
Sbjct: 61  WGFVDMASGRYLWRNLREMKNNEKMKSC 88


>ref|XP_003618966.1| hypothetical protein MTR_6g029390 [Medicago truncatula]
           gi|355493981|gb|AES75184.1| hypothetical protein
           MTR_6g029390 [Medicago truncatula]
           gi|388522841|gb|AFK49482.1| unknown [Medicago
           truncatula]
          Length = 90

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/86 (58%), Positives = 60/86 (69%)
 Frame = -2

Query: 358 MCPLRFILVFLSATLAGYFAWRTVRXXXXXXXXXXXXDATAVLPKQKQEFSFKKVVQDGF 179
           MCPLRFILVF SA LAGYFAWRTVR                  P +K++F FKK++Q+GF
Sbjct: 1   MCPLRFILVFFSAVLAGYFAWRTVRSSPNIDLACDDSIEEEKSPFKKEDFDFKKMIQNGF 60

Query: 178 YIFVDMASGRYLWRNLRVNNESEKAK 101
           ++FVDMASGRYLWRNLR  N+ E+ K
Sbjct: 61  WVFVDMASGRYLWRNLRQTNKDEELK 86


>ref|XP_002319695.1| predicted protein [Populus trichocarpa] gi|222858071|gb|EEE95618.1|
           predicted protein [Populus trichocarpa]
          Length = 89

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/87 (55%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
 Frame = -2

Query: 358 MCPLRFILVFLSATLAGYFAWRTVRXXXXXXXXXXXXD-ATAVLPKQKQEFSFKKVVQDG 182
           MCPLRFILVF SA LAGYFAWRTVR              A     ++KQEF+FK+++Q+G
Sbjct: 1   MCPLRFILVFFSAVLAGYFAWRTVRSSPEIDDFVSDDSTAEKTSLREKQEFNFKRIIQNG 60

Query: 181 FYIFVDMASGRYLWRNLRVNNESEKAK 101
           F++FVDMASGRYLWRN +   + E  K
Sbjct: 61  FWVFVDMASGRYLWRNFKEMKKDETLK 87


>ref|XP_003618028.1| hypothetical protein MTR_5g098200 [Medicago truncatula]
           gi|355519363|gb|AET00987.1| hypothetical protein
           MTR_5g098200 [Medicago truncatula]
          Length = 85

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/80 (56%), Positives = 54/80 (67%)
 Frame = -2

Query: 358 MCPLRFILVFLSATLAGYFAWRTVRXXXXXXXXXXXXDATAVLPKQKQEFSFKKVVQDGF 179
           MCPLRFILVF SA LAGYFAWRTV                     +K++F FKK++Q+GF
Sbjct: 1   MCPLRFILVFFSAVLAGYFAWRTVSFSPNIDLASNESTEEVRSFLKKEDFDFKKMIQNGF 60

Query: 178 YIFVDMASGRYLWRNLRVNN 119
           ++F+DMASGRYLWRNLR  N
Sbjct: 61  WVFIDMASGRYLWRNLRQTN 80


>emb|CBI29943.3| unnamed protein product [Vitis vinifera]
          Length = 177

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 48/79 (60%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
 Frame = -2

Query: 358 MCPLRFILVFLSATLAGYFAWRTVRXXXXXXXXXXXXD--ATAVLPKQKQEFSFKKVVQD 185
           MCPLRFILVFLSA LAGYFAW TVR                T+   K KQE +FK +V D
Sbjct: 89  MCPLRFILVFLSAVLAGYFAWSTVRSSQENALVSEDSCPQTTSSSSKDKQELNFKTMVAD 148

Query: 184 GFYIFVDMASGRYLWRNLR 128
           GF++FVDMASGRYLWRNL+
Sbjct: 149 GFWVFVDMASGRYLWRNLK 167


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