BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025941
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japo...    92   6e-17
gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indi...    92   6e-17
gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja...    90   2e-16
gb|ABB46931.2| retrotransposon protein, putative, unclassified [...    90   2e-16
emb|CBL94160.1| putative RNA-directed DNA polymerase (Reverse tr...    88   8e-16

>gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]
          Length = 1256

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/111 (38%), Positives = 63/111 (56%)
 Frame = -3

Query: 339 EYFEEIFATDSPAENKEILNLFHPCITEKENKLLTAIPSQEDIWQVVKKMGALKSPGPDG 160
           EYF+ +F  D   ++  + +L  P +T+  N+ L    S+E+I   + ++G LK+PGPDG
Sbjct: 470 EYFQRLFTADPSIDHSRVTSLIKPKVTDAMNEELCKTVSEEEIANALFQIGPLKAPGPDG 529

Query: 159 FQGIFYQHCWDIVGDSVTDCVQDFFMHGKLNPSFNETFIALIPKISNPDHV 7
           F G FYQ  W I+ D +   VQ+FF  G +    NET I LIPK   P  +
Sbjct: 530 FPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNETAIVLIPKTEQPQEL 580


>gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indica Group]
          Length = 633

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/111 (38%), Positives = 63/111 (56%)
 Frame = -3

Query: 339 EYFEEIFATDSPAENKEILNLFHPCITEKENKLLTAIPSQEDIWQVVKKMGALKSPGPDG 160
           EYF+ +F  D   ++  + +L  P +T+  N+ L    S+E+I   + ++G LK+PGPDG
Sbjct: 470 EYFQRLFTADPSIDHSRVTSLIKPKVTDAMNEELCKTVSEEEIANALFQIGPLKAPGPDG 529

Query: 159 FQGIFYQHCWDIVGDSVTDCVQDFFMHGKLNPSFNETFIALIPKISNPDHV 7
           F G FYQ  W I+ D +   VQ+FF  G +    NET I LIPK   P  +
Sbjct: 530 FPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNETAIVLIPKTEQPQEL 580


>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1888

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/111 (38%), Positives = 63/111 (56%)
 Frame = -3

Query: 339  EYFEEIFATDSPAENKEILNLFHPCITEKENKLLTAIPSQEDIWQVVKKMGALKSPGPDG 160
            EYF+ +F  D   ++  + +L  P +T+  N+ L    S+E+I   + ++G LK+PGPDG
Sbjct: 962  EYFQRLFTADPSIDHSRVTSLMKPKVTDAMNEELCKTFSEEEIANALFQIGPLKAPGPDG 1021

Query: 159  FQGIFYQHCWDIVGDSVTDCVQDFFMHGKLNPSFNETFIALIPKISNPDHV 7
            F G FYQ  W I+ D +   VQ+FF  G +    NET I LIPK   P  +
Sbjct: 1022 FPGRFYQRNWAILKDDIVRAVQEFFSLGTMPSGVNETAIVLIPKTEQPQEL 1072


>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1853

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/111 (38%), Positives = 63/111 (56%)
 Frame = -3

Query: 339  EYFEEIFATDSPAENKEILNLFHPCITEKENKLLTAIPSQEDIWQVVKKMGALKSPGPDG 160
            EYF+ +F  D   ++  + +L  P +T+  N+ L    S+E+I   + ++G LK+PGPDG
Sbjct: 927  EYFQRLFTADPSIDHSRVTSLMKPKVTDAMNEELCKTFSEEEIANALFQIGPLKAPGPDG 986

Query: 159  FQGIFYQHCWDIVGDSVTDCVQDFFMHGKLNPSFNETFIALIPKISNPDHV 7
            F G FYQ  W I+ D +   VQ+FF  G +    NET I LIPK   P  +
Sbjct: 987  FPGRFYQRNWAILKDDIVRAVQEFFSLGTMPSGVNETAIVLIPKTEQPQEL 1037


>emb|CBL94160.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 261

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
 Frame = -3

Query: 333 FEEIFATDSPAENKEILNLF---HPCITEKENKLLTAIPSQEDIWQVVKKMGALKSPGPD 163
           F++ F+ DSP  +  + NL     PC++   N+ L ++ + E+IW  V  +GALK+ G D
Sbjct: 70  FKKHFSCDSPPSDAYLSNLADITQPCVSNHHNESLLSLVTDEEIWDAVSSIGALKALGLD 129

Query: 162 GFQGIFYQHCWDIVGDSVTDCVQDFFMHGKLNPSFNETFIALIPKISNPDHVS 4
           G    F+  CWD +  SV+  V+DFF +G      N T I L+PKI NP++VS
Sbjct: 130 GLSVAFFHGCWDQIKGSVSCLVKDFFQNGSSLRLINHTNITLVPKIYNPENVS 182