BLASTX nr result

ID: Coptis21_contig00025871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025871
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532949.1| DNA binding protein, putative [Ricinus commu...   149   2e-34
gb|AGC39093.1| remorin-2 protein [Dimocarpus longan]                  146   2e-33
gb|AFB69340.1| remorin-4b, partial [Dimocarpus longan]                146   2e-33
ref|XP_004144446.1| PREDICTED: uncharacterized protein LOC101207...   145   3e-33
emb|CBI35798.3| unnamed protein product [Vitis vinifera]              145   4e-33

>ref|XP_002532949.1| DNA binding protein, putative [Ricinus communis]
           gi|223527278|gb|EEF29433.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 487

 Score =  149 bits (377), Expect = 2e-34
 Identities = 75/116 (64%), Positives = 90/116 (77%), Gaps = 4/116 (3%)
 Frame = -2

Query: 338 SGPLVPFN----RTTISATELQECHFAKLELGTQFDSVVSNWSSRXXXXXEISKSLRHFE 171
           SGPL   N     +TI   +LQECH AKL+LG+Q+DSV SNWSSR     +ISKSLRHFE
Sbjct: 295 SGPLPLGNSSSSNSTIDIAQLQECHLAKLQLGSQYDSVTSNWSSREEEEEDISKSLRHFE 354

Query: 170 PSDGCRKNVVDTRVCAWEEEERTKSCIRYQREEARIQAWVNLQSAKAEAQSRKLEV 3
               CR++V D+R  AWEEEE+TK C+RYQREEA+IQAW+NLQ+AKAEAQS+KLEV
Sbjct: 355 TGIICRRSVSDSRAAAWEEEEKTKCCLRYQREEAKIQAWLNLQTAKAEAQSKKLEV 410


>gb|AGC39093.1| remorin-2 protein [Dimocarpus longan]
          Length = 366

 Score =  146 bits (368), Expect = 2e-33
 Identities = 78/116 (67%), Positives = 90/116 (77%), Gaps = 4/116 (3%)
 Frame = -2

Query: 338 SGPLV--PFNRT--TISATELQECHFAKLELGTQFDSVVSNWSSRXXXXXEISKSLRHFE 171
           SGPL     N T  TI  ++LQECH AKL+ GTQ+DSV +NWSSR     +ISKSLRHFE
Sbjct: 182 SGPLAIGHLNSTNNTIDISQLQECHLAKLQRGTQYDSVTTNWSSREEEEEDISKSLRHFE 241

Query: 170 PSDGCRKNVVDTRVCAWEEEERTKSCIRYQREEARIQAWVNLQSAKAEAQSRKLEV 3
             +  RK+V D+R  AWEEEE+TK C+RYQREEA+IQAWVNLQSAKAEAQSRKLEV
Sbjct: 242 TGN-VRKSVSDSRAVAWEEEEKTKCCLRYQREEAKIQAWVNLQSAKAEAQSRKLEV 296


>gb|AFB69340.1| remorin-4b, partial [Dimocarpus longan]
          Length = 225

 Score =  146 bits (368), Expect = 2e-33
 Identities = 78/116 (67%), Positives = 90/116 (77%), Gaps = 4/116 (3%)
 Frame = -2

Query: 338 SGPLV--PFNRT--TISATELQECHFAKLELGTQFDSVVSNWSSRXXXXXEISKSLRHFE 171
           SGPL     N T  TI  ++LQECH AKL+ GTQ+DSV +NWSSR     +ISKSLRHFE
Sbjct: 41  SGPLAIGHLNSTNNTIDISQLQECHLAKLQRGTQYDSVTTNWSSREEEEEDISKSLRHFE 100

Query: 170 PSDGCRKNVVDTRVCAWEEEERTKSCIRYQREEARIQAWVNLQSAKAEAQSRKLEV 3
             +  RK+V D+R  AWEEEE+TK C+RYQREEA+IQAWVNLQSAKAEAQSRKLEV
Sbjct: 101 TGN-VRKSVSDSRAVAWEEEEKTKCCLRYQREEAKIQAWVNLQSAKAEAQSRKLEV 155


>ref|XP_004144446.1| PREDICTED: uncharacterized protein LOC101207750 [Cucumis sativus]
           gi|449519798|ref|XP_004166921.1| PREDICTED:
           uncharacterized protein LOC101225327 [Cucumis sativus]
          Length = 469

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/102 (67%), Positives = 84/102 (82%)
 Frame = -2

Query: 308 TISATELQECHFAKLELGTQFDSVVSNWSSRXXXXXEISKSLRHFEPSDGCRKNVVDTRV 129
           T+  ++LQECH AKL+L +Q+DSV SNWSSR     EISKSLRHFE  + CRK++ D+R 
Sbjct: 293 TVDISQLQECHLAKLQLPSQYDSVTSNWSSREEEEEEISKSLRHFETGNECRKSISDSRA 352

Query: 128 CAWEEEERTKSCIRYQREEARIQAWVNLQSAKAEAQSRKLEV 3
            AWEEEE+TK C RYQREE++IQAWVNLQ+AKAEAQS+KLEV
Sbjct: 353 AAWEEEEKTKCCNRYQREESKIQAWVNLQNAKAEAQSKKLEV 394


>emb|CBI35798.3| unnamed protein product [Vitis vinifera]
          Length = 456

 Score =  145 bits (365), Expect = 4e-33
 Identities = 73/116 (62%), Positives = 88/116 (75%), Gaps = 4/116 (3%)
 Frame = -2

Query: 338 SGPLV----PFNRTTISATELQECHFAKLELGTQFDSVVSNWSSRXXXXXEISKSLRHFE 171
           SGPL         TTI  ++LQECH AKL+LG+QFDSV S+WSSR     E+SKSLRH E
Sbjct: 268 SGPLALGSSNSTNTTIDISQLQECHLAKLQLGSQFDSVGSHWSSREEEEEEVSKSLRHSE 327

Query: 170 PSDGCRKNVVDTRVCAWEEEERTKSCIRYQREEARIQAWVNLQSAKAEAQSRKLEV 3
             + CRK++ + +  +WEEEE+TK C+RYQREEA+IQAWVNLQ AKAEAQSRKLEV
Sbjct: 328 TGNFCRKSISEAKSASWEEEEKTKCCLRYQREEAKIQAWVNLQKAKAEAQSRKLEV 383


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