BLASTX nr result

ID: Coptis21_contig00025832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025832
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144971.1| PREDICTED: uncharacterized protein LOC101219...    63   3e-08
ref|XP_002277762.1| PREDICTED: uncharacterized protein LOC100259...    57   2e-06
ref|XP_002516851.1| protein binding protein, putative [Ricinus c...    55   5e-06

>ref|XP_004144971.1| PREDICTED: uncharacterized protein LOC101219420 [Cucumis sativus]
           gi|449470479|ref|XP_004152944.1| PREDICTED:
           uncharacterized protein LOC101219282 [Cucumis sativus]
           gi|449507660|ref|XP_004163094.1| PREDICTED:
           uncharacterized protein LOC101227905 [Cucumis sativus]
          Length = 423

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/45 (60%), Positives = 38/45 (84%)
 Frame = +2

Query: 2   LHLFYTVLKMPTIYAILISAALGFGIAMSVNGLYLYTFAYRSRVA 136
           LHLFYT+LK+  IYAIL+SA LGFG+AMS+N +Y++ + +R R+A
Sbjct: 373 LHLFYTLLKLKAIYAILLSAILGFGVAMSLNAVYIHYYIWRVRIA 417


>ref|XP_002277762.1| PREDICTED: uncharacterized protein LOC100259554 [Vitis vinifera]
           gi|297736929|emb|CBI26130.3| unnamed protein product
           [Vitis vinifera]
          Length = 429

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/54 (48%), Positives = 39/54 (72%)
 Frame = +2

Query: 2   LHLFYTVLKMPTIYAILISAALGFGIAMSVNGLYLYTFAYRSRVALMDTNSNAV 163
           +HLFY++L +  +YAI++SA +GFGIAMS+N LY+  F +R ++     NSN V
Sbjct: 379 VHLFYSLLHLKAVYAIMLSAVMGFGIAMSLNSLYIQFFTWRFQIT---QNSNPV 429


>ref|XP_002516851.1| protein binding protein, putative [Ricinus communis]
           gi|223543939|gb|EEF45465.1| protein binding protein,
           putative [Ricinus communis]
          Length = 441

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 23/41 (56%), Positives = 34/41 (82%)
 Frame = +2

Query: 2   LHLFYTVLKMPTIYAILISAALGFGIAMSVNGLYLYTFAYR 124
           +HLFY++L +  IYAIL+S+ LGFGIAM++N LY+  +A+R
Sbjct: 354 VHLFYSMLHLKAIYAILVSSVLGFGIAMTINSLYIQYYAWR 394


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