BLASTX nr result

ID: Coptis21_contig00025787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025787
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531860.1| amino acid transporter, putative [Ricinus co...   131   7e-29
ref|XP_002283468.1| PREDICTED: vacuolar amino acid transporter 1...   125   4e-27
ref|XP_002283458.2| PREDICTED: vacuolar amino acid transporter 1...   123   2e-26
emb|CAN80117.1| hypothetical protein VITISV_032529 [Vitis vinifera]   123   2e-26
emb|CAN62250.1| hypothetical protein VITISV_027355 [Vitis vinifera]   120   9e-26

>ref|XP_002531860.1| amino acid transporter, putative [Ricinus communis]
           gi|223528510|gb|EEF30538.1| amino acid transporter,
           putative [Ricinus communis]
          Length = 404

 Score =  131 bits (329), Expect = 7e-29
 Identities = 72/140 (51%), Positives = 92/140 (65%)
 Frame = -3

Query: 420 DDDKFSLITPLAHHDGLEGGVIYNKKDEHNQHQKEGTSTFFKTCFNGLNALSGVGLLSVP 241
           + ++ SLI PL   +  E   + + +++ NQ++K GT+ FFKTCFNGLNALSGVG+LS P
Sbjct: 5   EQEEASLIIPLILDEKQEE--VGHVEEDCNQYEK-GTTGFFKTCFNGLNALSGVGILSTP 61

Query: 240 YAXXXXXXXXXXXXXXXXXXXXXXXXLIKWCMDIDSEITSYPDIGERAYGPVGRAIVSIF 61
           YA                        LIK CM++DS I +YPDIGERA+G  GR ++SIF
Sbjct: 62  YAVASGGWLSLIFLFTIAISTFYSGLLIKRCMEVDSNIRTYPDIGERAFGSKGRGLISIF 121

Query: 60  MYLELYFVATGFLILEGDNL 1
           MY+ELY VATGFLILEGDNL
Sbjct: 122 MYVELYLVATGFLILEGDNL 141


>ref|XP_002283468.1| PREDICTED: vacuolar amino acid transporter 1 [Vitis vinifera]
           gi|296082904|emb|CBI22205.3| unnamed protein product
           [Vitis vinifera]
          Length = 428

 Score =  125 bits (314), Expect = 4e-27
 Identities = 67/138 (48%), Positives = 83/138 (60%)
 Frame = -3

Query: 414 DKFSLITPLAHHDGLEGGVIYNKKDEHNQHQKEGTSTFFKTCFNGLNALSGVGLLSVPYA 235
           D F+L  PL H D     V     + + + Q  G+++FFKTCFNGLNALSGVG+LS PYA
Sbjct: 7   DGFTLTLPLLHDDQNHNKV--EDIESNGRKQDVGSTSFFKTCFNGLNALSGVGILSTPYA 64

Query: 234 XXXXXXXXXXXXXXXXXXXXXXXXLIKWCMDIDSEITSYPDIGERAYGPVGRAIVSIFMY 55
                                   L++ CMD    I +YPD+GERA+G +GR +VS+FMY
Sbjct: 65  LSSGGWLSLVLLLVIATATFYTGLLLRRCMDAHPNIRTYPDVGERAFGKMGRLLVSVFMY 124

Query: 54  LELYFVATGFLILEGDNL 1
            ELY VATGFLILEGDNL
Sbjct: 125 TELYLVATGFLILEGDNL 142


>ref|XP_002283458.2| PREDICTED: vacuolar amino acid transporter 1-like [Vitis vinifera]
           gi|296082903|emb|CBI22204.3| unnamed protein product
           [Vitis vinifera]
          Length = 428

 Score =  123 bits (308), Expect = 2e-26
 Identities = 70/140 (50%), Positives = 87/140 (62%), Gaps = 2/140 (1%)
 Frame = -3

Query: 414 DKFSLITPLAHHDG--LEGGVIYNKKDEHNQHQKEGTSTFFKTCFNGLNALSGVGLLSVP 241
           D FSL  PL H +   +E    Y+   + +     G+++FFKTCFNGLNALSG+G+LSVP
Sbjct: 7   DGFSLAFPLLHDESQNVEDMEYYSTGCKLDL----GSTSFFKTCFNGLNALSGIGILSVP 62

Query: 240 YAXXXXXXXXXXXXXXXXXXXXXXXXLIKWCMDIDSEITSYPDIGERAYGPVGRAIVSIF 61
           YA                        L++ CMD+D  I +YPDIGE+A+G  GR +VSIF
Sbjct: 63  YALASGGWLSLMLLFVIALATFYTGLLLQRCMDVDLNIRTYPDIGEQAFGKKGRLMVSIF 122

Query: 60  MYLELYFVATGFLILEGDNL 1
           MYLELY VATGFLILEGDNL
Sbjct: 123 MYLELYLVATGFLILEGDNL 142


>emb|CAN80117.1| hypothetical protein VITISV_032529 [Vitis vinifera]
          Length = 302

 Score =  123 bits (308), Expect = 2e-26
 Identities = 70/140 (50%), Positives = 87/140 (62%), Gaps = 2/140 (1%)
 Frame = -3

Query: 414 DKFSLITPLAHHDG--LEGGVIYNKKDEHNQHQKEGTSTFFKTCFNGLNALSGVGLLSVP 241
           D FSL  PL H +   +E    Y+   + +     G+++FFKTCFNGLNALSG+G+LSVP
Sbjct: 7   DGFSLAFPLLHDESQNVEDMEYYSTGCKLDL----GSTSFFKTCFNGLNALSGIGILSVP 62

Query: 240 YAXXXXXXXXXXXXXXXXXXXXXXXXLIKWCMDIDSEITSYPDIGERAYGPVGRAIVSIF 61
           YA                        L++ CMD+D  I +YPDIGE+A+G  GR +VSIF
Sbjct: 63  YALASGGWLSLMLLFVIALATFYTGLLLQRCMDVDLNIRTYPDIGEQAFGKKGRLMVSIF 122

Query: 60  MYLELYFVATGFLILEGDNL 1
           MYLELY VATGFLILEGDNL
Sbjct: 123 MYLELYLVATGFLILEGDNL 142


>emb|CAN62250.1| hypothetical protein VITISV_027355 [Vitis vinifera]
          Length = 421

 Score =  120 bits (302), Expect = 9e-26
 Identities = 70/138 (50%), Positives = 82/138 (59%)
 Frame = -3

Query: 414 DKFSLITPLAHHDGLEGGVIYNKKDEHNQHQKEGTSTFFKTCFNGLNALSGVGLLSVPYA 235
           D+FS   PL H D +  GV              GT+TFF+TCFNGLNALSGVG+LS+PYA
Sbjct: 8   DEFSHTIPLMH-DEINRGV---------DSSTLGTTTFFQTCFNGLNALSGVGILSIPYA 57

Query: 234 XXXXXXXXXXXXXXXXXXXXXXXXLIKWCMDIDSEITSYPDIGERAYGPVGRAIVSIFMY 55
                                   LI+ CMD+DS I +YPDI ERA+G  G+ IVSI M 
Sbjct: 58  LASGGWLSLILLLAVAFISFYTGLLIQRCMDVDSNIRTYPDISERAFGNNGKMIVSILMS 117

Query: 54  LELYFVATGFLILEGDNL 1
           +ELY VATGFLILEGDNL
Sbjct: 118 IELYLVATGFLILEGDNL 135


Top