BLASTX nr result

ID: Coptis21_contig00025771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025771
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001141619.2| MYB transcription factor [Zea mays] gi|23890...   160   1e-37
ref|XP_002276341.1| PREDICTED: transcription factor MYB104 [Viti...   157   1e-36
gb|ABK20308.1| Myb transcription factor [Malus x domestica] gi|3...   157   1e-36
dbj|BAJ33746.1| unnamed protein product [Thellungiella halophila]     155   3e-36
ref|XP_004162756.1| PREDICTED: uncharacterized LOC101212170 [Cuc...   154   6e-36

>ref|NP_001141619.2| MYB transcription factor [Zea mays] gi|238908821|gb|ACF86732.2|
           unknown [Zea mays] gi|323388741|gb|ADX60175.1| MYB
           transcription factor [Zea mays]
           gi|413951924|gb|AFW84573.1| putative MYB DNA-binding
           domain superfamily protein [Zea mays]
          Length = 401

 Score =  160 bits (405), Expect = 1e-37
 Identities = 81/140 (57%), Positives = 95/140 (67%), Gaps = 21/140 (15%)
 Frame = +3

Query: 21  ETEIRKEILLFNQENGDVNTTPTPNNSGDGNVSGE---------------------IEVG 137
           ET+   E+LL  Q N   + +P P+  GD  ++                       IE  
Sbjct: 39  ETQTLTEVLLQPQPN---HLSPPPSGEGDDGITASGAPVGGDAAASASAAAAANATIEER 95

Query: 138 VRGPWSPEEDAILSRLVSKFGPRNWSVMARGIPGRSGKSCRLRWCNQLDPYVERKPFTEE 317
           VRGPWSPEEDA+LS LV KFG RNW+++ARGIPGRSGKSCRLRWCNQLDP V+RKPFTEE
Sbjct: 96  VRGPWSPEEDAVLSNLVEKFGARNWTLIARGIPGRSGKSCRLRWCNQLDPQVKRKPFTEE 155

Query: 318 EDRIIVAAHAIHGNKWAVIA 377
           EDRII+AAHA+HGNKWA IA
Sbjct: 156 EDRIIMAAHAVHGNKWASIA 175


>ref|XP_002276341.1| PREDICTED: transcription factor MYB104 [Vitis vinifera]
           gi|296086112|emb|CBI31553.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score =  157 bits (396), Expect = 1e-36
 Identities = 76/103 (73%), Positives = 82/103 (79%)
 Frame = +3

Query: 69  DVNTTPTPNNSGDGNVSGEIEVGVRGPWSPEEDAILSRLVSKFGPRNWSVMARGIPGRSG 248
           DV T       GD    G     VRGPWSPEEDAILS+LVSKFGPRNWS++ARGI GRSG
Sbjct: 18  DVVTANDARRDGDTRAGGSSS-RVRGPWSPEEDAILSQLVSKFGPRNWSLIARGISGRSG 76

Query: 249 KSCRLRWCNQLDPYVERKPFTEEEDRIIVAAHAIHGNKWAVIA 377
           KSCRLRWCNQLDP V+RKPFTEEEDRII+AAH+ HGNKWA IA
Sbjct: 77  KSCRLRWCNQLDPCVKRKPFTEEEDRIIIAAHSHHGNKWASIA 119


>gb|ABK20308.1| Myb transcription factor [Malus x domestica]
           gi|302398917|gb|ADL36753.1| MYB domain class
           transcription factor [Malus x domestica]
          Length = 412

 Score =  157 bits (396), Expect = 1e-36
 Identities = 71/80 (88%), Positives = 77/80 (96%)
 Frame = +3

Query: 138 VRGPWSPEEDAILSRLVSKFGPRNWSVMARGIPGRSGKSCRLRWCNQLDPYVERKPFTEE 317
           VRGPWSPEEDA+LSRLVS FG RNWS++ARGIPGRSGKSCRLRWCNQLDP V+RKPF+EE
Sbjct: 32  VRGPWSPEEDAVLSRLVSNFGARNWSLIARGIPGRSGKSCRLRWCNQLDPCVKRKPFSEE 91

Query: 318 EDRIIVAAHAIHGNKWAVIA 377
           EDRIIV+AHAIHGNKWAVIA
Sbjct: 92  EDRIIVSAHAIHGNKWAVIA 111


>dbj|BAJ33746.1| unnamed protein product [Thellungiella halophila]
          Length = 395

 Score =  155 bits (392), Expect = 3e-36
 Identities = 68/93 (73%), Positives = 84/93 (90%)
 Frame = +3

Query: 99  SGDGNVSGEIEVGVRGPWSPEEDAILSRLVSKFGPRNWSVMARGIPGRSGKSCRLRWCNQ 278
           +GD +  G I+  V+GPWS EEDA+L++LVSK GPRNWS++ARGIPGRSGKSCRLRWCNQ
Sbjct: 37  AGDSSGGGGIKSKVKGPWSTEEDAVLTKLVSKLGPRNWSLIARGIPGRSGKSCRLRWCNQ 96

Query: 279 LDPYVERKPFTEEEDRIIVAAHAIHGNKWAVIA 377
           LDP ++RKPF++EEDR+I++AHAIHGNKWAVIA
Sbjct: 97  LDPCLKRKPFSDEEDRMIISAHAIHGNKWAVIA 129


>ref|XP_004162756.1| PREDICTED: uncharacterized LOC101212170 [Cucumis sativus]
          Length = 377

 Score =  154 bits (390), Expect = 6e-36
 Identities = 70/80 (87%), Positives = 76/80 (95%)
 Frame = +3

Query: 138 VRGPWSPEEDAILSRLVSKFGPRNWSVMARGIPGRSGKSCRLRWCNQLDPYVERKPFTEE 317
           V+GPWSPEEDAILSRLVSKFG RNWS++ARGI GRSGKSCRLRWCNQLDP V+RKPFT+E
Sbjct: 56  VKGPWSPEEDAILSRLVSKFGARNWSLIARGIAGRSGKSCRLRWCNQLDPSVKRKPFTDE 115

Query: 318 EDRIIVAAHAIHGNKWAVIA 377
           EDRIIVAAHA+HGNKWA IA
Sbjct: 116 EDRIIVAAHAVHGNKWAAIA 135


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