BLASTX nr result

ID: Coptis21_contig00025636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025636
         (1151 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32203.3| unnamed protein product [Vitis vinifera]               79   2e-12
ref|YP_001312257.1| hypothetical protein CYtaCp092 [Cycas taitun...    71   6e-10
ref|YP_001152246.1| ORF67g [Pinus koraiensis] gi|145048871|gb|AB...    58   4e-06

>emb|CBI32203.3| unnamed protein product [Vitis vinifera]
          Length = 83

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 38/43 (88%), Positives = 38/43 (88%)
 Frame = +1

Query: 127 FVDKADSELSFIPRHNLYPCASYSPGGCS*KYIHFYPLTSIPR 255
           FVDKADSELSFIPRHNLYPCASYSPG  S KY H YPLTSIPR
Sbjct: 13  FVDKADSELSFIPRHNLYPCASYSPGVRSQKYSHPYPLTSIPR 55


>ref|YP_001312257.1| hypothetical protein CYtaCp092 [Cycas taitungensis]
           gi|150251549|ref|YP_001312281.1| hypothetical protein
           CYtaCp116 [Cycas taitungensis]
           gi|452848926|ref|YP_007474604.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
           gi|452849009|ref|YP_007474688.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
           gi|149941575|dbj|BAF64999.1| hypothetical protein
           (chloroplast) [Cycas taitungensis]
           gi|149941599|dbj|BAF65023.1| hypothetical protein
           (chloroplast) [Cycas taitungensis]
           gi|372863081|gb|AEX99154.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
           gi|372863164|gb|AEX99237.1| hypothetical_protein
           (chloroplast) [Cycas revoluta]
          Length = 67

 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 36/48 (75%), Positives = 38/48 (79%)
 Frame = +1

Query: 127 FVDKADSELSFIPRHNLYPCASYSPGGCS*KYIHFYPLTSIPRASYPF 270
           FVDKADSEL FIPRHNLYP ASY PG  S +Y H YPL SIPRASY +
Sbjct: 13  FVDKADSELFFIPRHNLYPFASYQPGVHS-QYSHPYPLMSIPRASYDY 59


>ref|YP_001152246.1| ORF67g [Pinus koraiensis] gi|145048871|gb|ABP35486.1| ORF67g [Pinus
           koraiensis]
          Length = 67

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -3

Query: 408 MEAGKGYNSAIECHLDVVEVISLSLIIPKSNASFSI 301
           M  GKGYNSA+ECHLD+VEVIS SLIIPK N S SI
Sbjct: 1   MRVGKGYNSAVECHLDMVEVISSSLIIPKPNVSPSI 36


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