BLASTX nr result

ID: Coptis21_contig00025588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025588
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275902.2| PREDICTED: ABC transporter B family member 2...   161   6e-38
gb|ABK96695.1| unknown [Populus trichocarpa x Populus deltoides]      158   4e-37
ref|XP_004139927.1| PREDICTED: ABC transporter B family member 2...   158   5e-37
ref|XP_002532928.1| Transporter ATM1, mitochondrial precursor, p...   157   6e-37
dbj|BAJ96957.1| predicted protein [Hordeum vulgare subsp. vulgare]    157   8e-37

>ref|XP_002275902.2| PREDICTED: ABC transporter B family member 25, mitochondrial-like
           [Vitis vinifera] gi|297745734|emb|CBI15790.3| unnamed
           protein product [Vitis vinifera]
          Length = 726

 Score =  161 bits (407), Expect = 6e-38
 Identities = 83/104 (79%), Positives = 93/104 (89%)
 Frame = +3

Query: 3   VLNVQVPFLFKHAVDWLSVASGAGGQLASFSTANSTILALFVSPAAVLVGYGIARAGASA 182
           VLNVQVPFLFK AVDWL+  +G    LASF+TANST LALFVSPAAVLVGYGIAR+GASA
Sbjct: 152 VLNVQVPFLFKLAVDWLTTTTGNATALASFTTANSTALALFVSPAAVLVGYGIARSGASA 211

Query: 183 CNELRNAVFSKVASRTIRTVSRQVFAHLHNLDLRYHLSRQTGAL 314
            NELR AVFSKVA RTIR+VSR+VF+HLH+LDL+YHLSR+TGAL
Sbjct: 212 FNELRTAVFSKVALRTIRSVSRRVFSHLHDLDLQYHLSRETGAL 255


>gb|ABK96695.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 533

 Score =  158 bits (400), Expect = 4e-37
 Identities = 79/104 (75%), Positives = 91/104 (87%)
 Frame = +3

Query: 3   VLNVQVPFLFKHAVDWLSVASGAGGQLASFSTANSTILALFVSPAAVLVGYGIARAGASA 182
           VLNVQVPFLFK AVDWL+ A+G    LASF+TANST+LALF +PA+VL+GYGIAR G+SA
Sbjct: 186 VLNVQVPFLFKLAVDWLTTATGNAAALASFTTANSTLLALFATPASVLIGYGIARTGSSA 245

Query: 183 CNELRNAVFSKVASRTIRTVSRQVFAHLHNLDLRYHLSRQTGAL 314
            NELR AVFSKVA RTIR+VSR+VF+HLH LDLRYHLSR+TG L
Sbjct: 246 FNELRTAVFSKVALRTIRSVSRKVFSHLHELDLRYHLSRETGGL 289


>ref|XP_004139927.1| PREDICTED: ABC transporter B family member 25, mitochondrial-like
           [Cucumis sativus]
          Length = 762

 Score =  158 bits (399), Expect = 5e-37
 Identities = 80/104 (76%), Positives = 92/104 (88%)
 Frame = +3

Query: 3   VLNVQVPFLFKHAVDWLSVASGAGGQLASFSTANSTILALFVSPAAVLVGYGIARAGASA 182
           +LNVQVPFLFK AVDWL+ ASG    LASF+ ANST+L LF +PAAVLVGYGIAR+GASA
Sbjct: 187 ILNVQVPFLFKLAVDWLTTASGNAAALASFTAANSTMLTLFSTPAAVLVGYGIARSGASA 246

Query: 183 CNELRNAVFSKVASRTIRTVSRQVFAHLHNLDLRYHLSRQTGAL 314
            NELR AVFSKVA RTIR+VSR+VF+HLH+LDL+YHLSR+TGAL
Sbjct: 247 FNELRTAVFSKVALRTIRSVSRKVFSHLHDLDLQYHLSRETGAL 290


>ref|XP_002532928.1| Transporter ATM1, mitochondrial precursor, putative [Ricinus
           communis] gi|223527304|gb|EEF29455.1| Transporter ATM1,
           mitochondrial precursor, putative [Ricinus communis]
          Length = 720

 Score =  157 bits (398), Expect = 6e-37
 Identities = 80/104 (76%), Positives = 91/104 (87%)
 Frame = +3

Query: 3   VLNVQVPFLFKHAVDWLSVASGAGGQLASFSTANSTILALFVSPAAVLVGYGIARAGASA 182
           VLNVQVPFLFK AVDWL+ ASG    LASF++ANST+LALF +PA+VL+GYGIAR GASA
Sbjct: 146 VLNVQVPFLFKLAVDWLTTASGNATALASFTSANSTLLALFATPASVLIGYGIARTGASA 205

Query: 183 CNELRNAVFSKVASRTIRTVSRQVFAHLHNLDLRYHLSRQTGAL 314
            NELR AVFS VA RTIR VSR+VF+HLH+LDLRYHLSR+TGAL
Sbjct: 206 FNELRTAVFSNVALRTIRQVSRKVFSHLHDLDLRYHLSRETGAL 249


>dbj|BAJ96957.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 758

 Score =  157 bits (397), Expect = 8e-37
 Identities = 77/104 (74%), Positives = 88/104 (84%)
 Frame = +3

Query: 3   VLNVQVPFLFKHAVDWLSVASGAGGQLASFSTANSTILALFVSPAAVLVGYGIARAGASA 182
           V+NVQVPFLFK A+DWL+   GA   LASF+ AN+T+LALF SPAAVL+GYGIAR+G SA
Sbjct: 193 VINVQVPFLFKLAIDWLAALGGAEASLASFTDANATLLALFASPAAVLIGYGIARSGVSA 252

Query: 183 CNELRNAVFSKVASRTIRTVSRQVFAHLHNLDLRYHLSRQTGAL 314
           C ELRNA+FSKV  R IR+VSR VF+HLH LDLRYHLSRQTGAL
Sbjct: 253 CTELRNALFSKVTWRAIRSVSRMVFSHLHELDLRYHLSRQTGAL 296


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