BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025577
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat...   364   8e-99
ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat...   364   1e-98
ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|2...   361   6e-98
ref|XP_003628710.1| Pentatricopeptide repeat-containing protein ...   361   8e-98
ref|XP_002514567.1| pentatricopeptide repeat-containing protein,...   358   7e-97

>ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera] gi|297738214|emb|CBI27415.3|
           unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  364 bits (935), Expect = 8e-99
 Identities = 179/237 (75%), Positives = 208/237 (87%), Gaps = 8/237 (3%)
 Frame = -1

Query: 687 AVDIFREMRYENLSIDQYTFGSVLTACGGLLDLRHGKQIHAYIIRTDYKDNIFVGSALVD 508
           A+D+FREMR    ++DQ+TFGSVLTACG LL L  GKQIHAY+IRTD+KDN+FVGSALVD
Sbjct: 254 ALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVD 313

Query: 507 MYSKCGSIRHAEKVFKRMVHKNIVSWTALLVGYGQNGLNEEAMRIFCEMQRNGVEPDEFT 328
           MYSKC SI+ AE VFKRM  KN++SWTA+LVGYGQNG +EEA++IF EMQRNGVEPD+FT
Sbjct: 314 MYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFT 373

Query: 327 LGSVISSCANLASLEEGAQFHSQALV--------LANALVTLYGKCGSIEDSHKLFNEMH 172
           LGSVISSCANLASLEEGAQFH +ALV        ++NAL+TLYGKCGS E+SH+LF EM+
Sbjct: 374 LGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMN 433

Query: 171 VKDEVSWTALVSGYAQFGKANQTIDLFERMLDNELKPDGVTFIGVLSACSRAGLVEK 1
           ++DEVSWTAL++GYAQFGKAN+TI LFERML + LKPDGVTFIGVLSACSRAGLVEK
Sbjct: 434 IRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEK 490



 Score =  146 bits (369), Expect = 3e-33
 Identities = 81/256 (31%), Positives = 135/256 (52%), Gaps = 39/256 (15%)
 Frame = -1

Query: 651 LSIDQYTFGSVLTACGGLLDLRHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAE 472
           +++++ TF ++L  C     +  G+QI+  I++  +  ++FVGS LVDMY+K G I  A+
Sbjct: 134 MNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAK 193

Query: 471 KVFKRMVHKNIV-------------------------------SWTALLVGYGQNGLNEE 385
           + F  M  +N+V                               SWT ++ G  QNGL  E
Sbjct: 194 RYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLERE 253

Query: 384 AMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHSQAL--------VLANALVT 229
           A+ +F EM+  G   D+FT GSV+++C +L +L EG Q H+  +         + +ALV 
Sbjct: 254 ALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVD 313

Query: 228 LYGKCGSIEDSHKLFNEMHVKDEVSWTALVSGYAQFGKANQTIDLFERMLDNELKPDGVT 49
           +Y KC SI+ +  +F  M  K+ +SWTA++ GY Q G + + + +F  M  N ++PD  T
Sbjct: 314 MYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFT 373

Query: 48  FIGVLSACSRAGLVEK 1
              V+S+C+    +E+
Sbjct: 374 LGSVISSCANLASLEE 389



 Score =  113 bits (283), Expect = 3e-23
 Identities = 63/194 (32%), Positives = 99/194 (51%), Gaps = 10/194 (5%)
 Frame = -1

Query: 687 AVDIFREMRYENLSIDQYTFGSVLTACGGLLDLRHGKQIHAYIIRTDYKDNIFVGSALVD 508
           AV IF EM+   +  D +T GSV+++C  L  L  G Q H   + +     I V +AL+ 
Sbjct: 355 AVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALIT 414

Query: 507 MYSKCGSIRHAEKVFKRMVHKNIVSWTALLVGYGQNGLNEEAMRIFCEMQRNGVEPDEFT 328
           +Y KCGS  ++ ++F  M  ++ VSWTALL GY Q G   E + +F  M  +G++PD  T
Sbjct: 415 LYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVT 474

Query: 327 LGSVISSCANLASLEEGAQFHSQALV---------LANALVTLYGKCGSIEDSHKLFNEM 175
              V+S+C+    +E+G Q+    +              ++ L G+ G +E++    N M
Sbjct: 475 FIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNM 534

Query: 174 HV-KDEVSWTALVS 136
               D V W  L+S
Sbjct: 535 PCHPDVVGWATLLS 548



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 40/211 (18%)
 Frame = -1

Query: 537 NIFVGSALVDMYSKCGSIRHAEKVFKRMVHKNIVSWTALLVGYGQNGLNEEAMRIFCEMQ 358
           N+F  + ++ +YSK G +   +++F  M  ++ VSW   + GY   G   +A+R++  M 
Sbjct: 70  NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129

Query: 357 RN-GVEPDEFTLGSVISSCANLASLEEGAQFHSQAL------------------------ 253
           ++  +  +  T  +++  C+    ++ G Q + Q L                        
Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLI 189

Query: 252 ---------------VLANALVTLYGKCGSIEDSHKLFNEMHVKDEVSWTALVSGYAQFG 118
                          V+ N ++T   +CG IE+S +LF  +  +D +SWT +++G  Q G
Sbjct: 190 YDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNG 249

Query: 117 KANQTIDLFERMLDNELKPDGVTFIGVLSAC 25
              + +D+F  M       D  TF  VL+AC
Sbjct: 250 LEREALDMFREMRLAGFAMDQFTFGSVLTAC 280



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 33/133 (24%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
 Frame = -1

Query: 387 EAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHSQA----LVLANALVTLYG 220
           +A ++ C + +   +P+ F   ++I++   L +L              L   N ++++Y 
Sbjct: 23  QAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSWNTILSVYS 82

Query: 219 KCGSIEDSHKLFNEMHVKDEVSWTALVSGYAQFGKANQTIDLFERML-DNELKPDGVTFI 43
           K G +    ++FN M  +D VSW   +SGYA +G  +  + +++ ML D  +  + +TF 
Sbjct: 83  KLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFS 142

Query: 42  GVLSACSRAGLVE 4
            +L  CS+   V+
Sbjct: 143 TMLILCSKFRCVD 155


>ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  364 bits (934), Expect = 1e-98
 Identities = 179/237 (75%), Positives = 207/237 (87%), Gaps = 8/237 (3%)
 Frame = -1

Query: 687 AVDIFREMRYENLSIDQYTFGSVLTACGGLLDLRHGKQIHAYIIRTDYKDNIFVGSALVD 508
           A+D+FREMR ENL +DQYTFGSVLTACGG++ L+ GKQ+HAYIIRTDY+DNIFVGSALVD
Sbjct: 258 AIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVD 317

Query: 507 MYSKCGSIRHAEKVFKRMVHKNIVSWTALLVGYGQNGLNEEAMRIFCEMQRNGVEPDEFT 328
           MY KC SI+ AE VF++M  KN+VSWTA+LVGYGQNG +EEA++IFC+MQ NG+EPD+FT
Sbjct: 318 MYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFT 377

Query: 327 LGSVISSCANLASLEEGAQFHSQALV--------LANALVTLYGKCGSIEDSHKLFNEMH 172
           LGSVISSCANLASLEEGAQFH +ALV        ++NALVTLYGKCGSIEDSH+LF+EM 
Sbjct: 378 LGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMS 437

Query: 171 VKDEVSWTALVSGYAQFGKANQTIDLFERMLDNELKPDGVTFIGVLSACSRAGLVEK 1
             DEVSWTALVSGYAQFGKAN+T+ LFE ML +  KPD VTFIGVLSACSRAGLV+K
Sbjct: 438 YVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQK 494



 Score =  147 bits (371), Expect = 2e-33
 Identities = 77/233 (33%), Positives = 129/233 (55%), Gaps = 39/233 (16%)
 Frame = -1

Query: 582 GKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKRMVHKNIV----------- 436
           G Q+H ++++  ++  +FVGS LVDMYSK G +  A + F  M  KN+V           
Sbjct: 161 GLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMR 220

Query: 435 --------------------SWTALLVGYGQNGLNEEAMRIFCEMQRNGVEPDEFTLGSV 316
                               SWTA++ G+ QNGL+ EA+ +F EM+   +E D++T GSV
Sbjct: 221 CSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSV 280

Query: 315 ISSCANLASLEEGAQFHS--------QALVLANALVTLYGKCGSIEDSHKLFNEMHVKDE 160
           +++C  + +L+EG Q H+          + + +ALV +Y KC SI+ +  +F +M+ K+ 
Sbjct: 281 LTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNV 340

Query: 159 VSWTALVSGYAQFGKANQTIDLFERMLDNELKPDGVTFIGVLSACSRAGLVEK 1
           VSWTA++ GY Q G + + + +F  M +N ++PD  T   V+S+C+    +E+
Sbjct: 341 VSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEE 393



 Score =  115 bits (289), Expect = 6e-24
 Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 10/194 (5%)
 Frame = -1

Query: 687 AVDIFREMRYENLSIDQYTFGSVLTACGGLLDLRHGKQIHAYIIRTDYKDNIFVGSALVD 508
           AV IF +M+   +  D +T GSV+++C  L  L  G Q H   + +     I V +ALV 
Sbjct: 359 AVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVT 418

Query: 507 MYSKCGSIRHAEKVFKRMVHKNIVSWTALLVGYGQNGLNEEAMRIFCEMQRNGVEPDEFT 328
           +Y KCGSI  + ++F  M + + VSWTAL+ GY Q G   E +R+F  M  +G +PD+ T
Sbjct: 419 LYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVT 478

Query: 327 LGSVISSCANLASLEEGAQFHSQALV---------LANALVTLYGKCGSIEDSHKLFNEM 175
              V+S+C+    +++G Q     +              ++ L+ + G +E++ K  N+M
Sbjct: 479 FIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKM 538

Query: 174 HVK-DEVSWTALVS 136
               D + W +L+S
Sbjct: 539 PFSPDAIGWASLLS 552



 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 40/211 (18%)
 Frame = -1

Query: 537 NIFVGSALVDMYSKCGSIRHAEKVFKRMVHKNIVSWTALLVGYGQNGLNEEAMRIFCEMQ 358
           N++  + L+  YSK   +   E+VF  M  +++VSW +L+  Y   G   ++++ +  M 
Sbjct: 74  NLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLML 133

Query: 357 RNG-VEPDEFTLGSVISSCANLASLEEGAQFHSQA------------------------- 256
            NG    +   L +++   +    +  G Q H                            
Sbjct: 134 YNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLV 193

Query: 255 --------------LVLANALVTLYGKCGSIEDSHKLFNEMHVKDEVSWTALVSGYAQFG 118
                         +V+ N L+    +C  IEDS +LF +M  KD +SWTA+++G+ Q G
Sbjct: 194 FCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNG 253

Query: 117 KANQTIDLFERMLDNELKPDGVTFIGVLSAC 25
              + IDLF  M    L+ D  TF  VL+AC
Sbjct: 254 LDREAIDLFREMRLENLEMDQYTFGSVLTAC 284


>ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|222863951|gb|EEF01082.1|
           predicted protein [Populus trichocarpa]
          Length = 743

 Score =  361 bits (927), Expect = 6e-98
 Identities = 176/237 (74%), Positives = 206/237 (86%), Gaps = 8/237 (3%)
 Frame = -1

Query: 687 AVDIFREMRYENLSIDQYTFGSVLTACGGLLDLRHGKQIHAYIIRTDYKDNIFVGSALVD 508
           A+D+FR+MR E +++DQYTFGSVLTACGGL  L+ GK+IH  IIR+ Y  N+FVGSALVD
Sbjct: 254 AMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVD 313

Query: 507 MYSKCGSIRHAEKVFKRMVHKNIVSWTALLVGYGQNGLNEEAMRIFCEMQRNGVEPDEFT 328
           MY KC S+R+AE VFKRM +KN+VSWTA+LVGYGQNG +EEA+R+FC+MQRNG+EPD+FT
Sbjct: 314 MYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFT 373

Query: 327 LGSVISSCANLASLEEGAQFHSQALV--------LANALVTLYGKCGSIEDSHKLFNEMH 172
           LGSVISSCANLASLEEGAQFH QALV        ++NAL+TLYGKCGSIEDS++LF+EM 
Sbjct: 374 LGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMS 433

Query: 171 VKDEVSWTALVSGYAQFGKANQTIDLFERMLDNELKPDGVTFIGVLSACSRAGLVEK 1
            +DEVSWTALVSGYAQFGKAN+TIDLFERML   LKPD VTFI VLSACSRAGLVE+
Sbjct: 434 FRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVER 490



 Score =  141 bits (355), Expect = 1e-31
 Identities = 85/271 (31%), Positives = 144/271 (53%), Gaps = 42/271 (15%)
 Frame = -1

Query: 687 AVDIFREMRYEN-LSIDQYTFGSVL--TACGGLLDLRHGKQIHAYIIRTDYKDNIFVGSA 517
           AV  +  M  +  L++++ TF ++L   +  G +DL  G+QIH  I++  +   +FVGS+
Sbjct: 121 AVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDL--GRQIHGQIVKFGFGAYVFVGSS 178

Query: 516 LVDMYSKCGSIRHAEKVFKRMVHKNIV-------------------------------SW 430
           LVDMY+K G +  A +VF  +  +N+V                               SW
Sbjct: 179 LVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISW 238

Query: 429 TALLVGYGQNGLNEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFH----- 265
           T ++ G  QNGL  EAM +F +M++ G+  D++T GSV+++C  L +L+EG + H     
Sbjct: 239 TTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIR 298

Query: 264 ---SQALVLANALVTLYGKCGSIEDSHKLFNEMHVKDEVSWTALVSGYAQFGKANQTIDL 94
              +  + + +ALV +Y KC S+  +  +F  M  K+ VSWTA++ GY Q G + + + +
Sbjct: 299 SGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRV 358

Query: 93  FERMLDNELKPDGVTFIGVLSACSRAGLVEK 1
           F  M  N ++PD  T   V+S+C+    +E+
Sbjct: 359 FCDMQRNGIEPDDFTLGSVISSCANLASLEE 389



 Score =  115 bits (288), Expect = 8e-24
 Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 10/200 (5%)
 Frame = -1

Query: 687 AVDIFREMRYENLSIDQYTFGSVLTACGGLLDLRHGKQIHAYIIRTDYKDNIFVGSALVD 508
           AV +F +M+   +  D +T GSV+++C  L  L  G Q H   + +     I V +AL+ 
Sbjct: 355 AVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALIT 414

Query: 507 MYSKCGSIRHAEKVFKRMVHKNIVSWTALLVGYGQNGLNEEAMRIFCEMQRNGVEPDEFT 328
           +Y KCGSI  + ++F  M  ++ VSWTAL+ GY Q G   E + +F  M   G++PD  T
Sbjct: 415 LYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVT 474

Query: 327 LGSVISSCANLASLEEGAQFHSQALV---------LANALVTLYGKCGSIEDSHKLFNEM 175
             +V+S+C+    +E G Q+    L              ++ L+G+ G +E++    N+M
Sbjct: 475 FIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKM 534

Query: 174 HVK-DEVSWTALVSGYAQFG 118
               D + W  L+S    +G
Sbjct: 535 PFSPDSIGWATLLSSCRLYG 554


>ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522732|gb|AET03186.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  361 bits (926), Expect = 8e-98
 Identities = 178/237 (75%), Positives = 206/237 (86%), Gaps = 8/237 (3%)
 Frame = -1

Query: 687 AVDIFREMRYENLSIDQYTFGSVLTACGGLLDLRHGKQIHAYIIRTDYKDNIFVGSALVD 508
           A+DIFREM+ ENL +DQYTFGSVLTACGG++ L+ GKQ+HAYIIRTDYKDNIFV SALVD
Sbjct: 259 AIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVD 318

Query: 507 MYSKCGSIRHAEKVFKRMVHKNIVSWTALLVGYGQNGLNEEAMRIFCEMQRNGVEPDEFT 328
           MY KC +I+ AE VFK+M  KN+VSWTA+LVGYGQNG +EEA++ F +MQ+ G+EPD+FT
Sbjct: 319 MYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFT 378

Query: 327 LGSVISSCANLASLEEGAQFHSQAL--------VLANALVTLYGKCGSIEDSHKLFNEMH 172
           LGSVISSCANLASLEEGAQFH++AL         ++NALVTLYGKCGSIEDSH+LFNE+ 
Sbjct: 379 LGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS 438

Query: 171 VKDEVSWTALVSGYAQFGKANQTIDLFERMLDNELKPDGVTFIGVLSACSRAGLVEK 1
            KDEV+WTALVSGYAQFGKAN+TI LFE ML + LKPD VTFIGVLSACSRAGLVEK
Sbjct: 439 FKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEK 495



 Score =  148 bits (374), Expect = 9e-34
 Identities = 80/257 (31%), Positives = 139/257 (54%), Gaps = 39/257 (15%)
 Frame = -1

Query: 654 NLSIDQYTFGSVLTACGGLLDLRHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHA 475
           + ++++ TF ++L        ++ G+QIH ++++  +   +FVGS LVDMYSK G I  A
Sbjct: 138 SFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCA 197

Query: 474 EKVFKRMVHKNIV-------------------------------SWTALLVGYGQNGLNE 388
            KVF  +  KN+V                               SWT+++ G+ QNGL+ 
Sbjct: 198 RKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDR 257

Query: 387 EAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFHS--------QALVLANALV 232
           +A+ IF EM+   ++ D++T GSV+++C  + +L+EG Q H+          + +A+ALV
Sbjct: 258 DAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALV 317

Query: 231 TLYGKCGSIEDSHKLFNEMHVKDEVSWTALVSGYAQFGKANQTIDLFERMLDNELKPDGV 52
            +Y KC +I+ +  +F +M  K+ VSWTA++ GY Q G + + +  F  M    ++PD  
Sbjct: 318 DMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDF 377

Query: 51  TFIGVLSACSRAGLVEK 1
           T   V+S+C+    +E+
Sbjct: 378 TLGSVISSCANLASLEE 394



 Score =  115 bits (288), Expect = 8e-24
 Identities = 70/230 (30%), Positives = 113/230 (49%), Gaps = 10/230 (4%)
 Frame = -1

Query: 687  AVDIFREMRYENLSIDQYTFGSVLTACGGLLDLRHGKQIHAYIIRTDYKDNIFVGSALVD 508
            AV  F +M+   +  D +T GSV+++C  L  L  G Q HA  + +     I V +ALV 
Sbjct: 360  AVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVT 419

Query: 507  MYSKCGSIRHAEKVFKRMVHKNIVSWTALLVGYGQNGLNEEAMRIFCEMQRNGVEPDEFT 328
            +Y KCGSI  + ++F  +  K+ V+WTAL+ GY Q G   E + +F  M  +G++PD+ T
Sbjct: 420  LYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVT 479

Query: 327  LGSVISSCANLASLEEGAQFHSQAL---------VLANALVTLYGKCGSIEDSHKLFNEM 175
               V+S+C+    +E+G Q     +              ++ L+ + G IE++    N+M
Sbjct: 480  FIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKM 539

Query: 174  HVK-DEVSWTALVSGYAQFGKANQTIDLFERMLDNELKPDGVTFIGVLSA 28
                D +SW  L+S    +G  N  I  +      EL P       +LS+
Sbjct: 540  PFSPDAISWATLLSSCRFYG--NMDIGKWAAEFLMELDPHNTASYVLLSS 587



 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 68/272 (25%), Positives = 109/272 (40%), Gaps = 72/272 (26%)
 Frame = -1

Query: 624 SVLTACGGLLDLRHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKRMVHK 445
           ++L  C    +    K +H++II+T      F+ + L+  Y+K GSI +A KVF +M H 
Sbjct: 14  ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHP 73

Query: 444 NIVSWTALLVGYGQNGLNEEAMRIFCEM-QRNGV-------------------------- 346
           N+ SW  +L  Y + G   E   +F  M +R+GV                          
Sbjct: 74  NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133

Query: 345 ------EPDEFTLGSVISSCANLASLEEGAQFHSQA--------LVLANALVTLYGKCGS 208
                   +  T  +++   +    ++ G Q H           + + + LV +Y K G 
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGM 193

Query: 207 I-------------------------------EDSHKLFNEMHVKDEVSWTALVSGYAQF 121
           I                               EDS +LF EM  +D +SWT++++G+ Q 
Sbjct: 194 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253

Query: 120 GKANQTIDLFERMLDNELKPDGVTFIGVLSAC 25
           G     ID+F  M    L+ D  TF  VL+AC
Sbjct: 254 GLDRDAIDIFREMKLENLQMDQYTFGSVLTAC 285


>ref|XP_002514567.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546171|gb|EEF47673.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 515

 Score =  358 bits (918), Expect = 7e-97
 Identities = 173/237 (72%), Positives = 205/237 (86%), Gaps = 8/237 (3%)
 Frame = -1

Query: 687 AVDIFREMRYENLSIDQYTFGSVLTACGGLLDLRHGKQIHAYIIRTDYKDNIFVGSALVD 508
           A+D FR+MR + + +DQYTFGSVLTACGGL  LR GKQ+HA+IIR+D  DN+FVGSALVD
Sbjct: 257 AIDFFRQMRLDGIGMDQYTFGSVLTACGGLTALREGKQVHAFIIRSDCTDNVFVGSALVD 316

Query: 507 MYSKCGSIRHAEKVFKRMVHKNIVSWTALLVGYGQNGLNEEAMRIFCEMQRNGVEPDEFT 328
           MY KC  +R+AE VFKRM +KN+VSWTA+LVGYGQNG +EEA+++FC+MQRNG+EPD+FT
Sbjct: 317 MYCKCKILRYAEAVFKRMKYKNVVSWTAILVGYGQNGFSEEAVKVFCDMQRNGIEPDDFT 376

Query: 327 LGSVISSCANLASLEEGAQFHSQALV--------LANALVTLYGKCGSIEDSHKLFNEMH 172
           LGSVISSCANLASLEEGAQFH +ALV        ++NALVTLYGKCGSIEDS +LFNEM+
Sbjct: 377 LGSVISSCANLASLEEGAQFHCRALVSGLISSITVSNALVTLYGKCGSIEDSDRLFNEMN 436

Query: 171 VKDEVSWTALVSGYAQFGKANQTIDLFERMLDNELKPDGVTFIGVLSACSRAGLVEK 1
            +DEVSWTAL+SGYAQFGKA +TI+LFERML + LKPD VTFIGVL ACSRAGLV +
Sbjct: 437 FRDEVSWTALISGYAQFGKARETIELFERMLAHGLKPDAVTFIGVLLACSRAGLVAR 493



 Score =  143 bits (360), Expect = 4e-32
 Identities = 85/263 (32%), Positives = 138/263 (52%), Gaps = 41/263 (15%)
 Frame = -1

Query: 666 MRYENLSIDQYTFGSVLTACGG--LLDLRHGKQIHAYIIRTDYKDNIFVGSALVDMYSKC 493
           MR    ++++ TF ++L       L+DL  G+QIH +I++  +   +FVGS LVDMY+K 
Sbjct: 132 MRDGVFNLNRITFSTMLILASSRELVDL--GRQIHGHIMKFGFGGYVFVGSPLVDMYAKT 189

Query: 492 GSIRHAEKVFKRMVHKNIV-------------------------------SWTALLVGYG 406
           G +  A+KVF  M  +N+V                               SWT ++ G  
Sbjct: 190 GLVYEAKKVFDEMPDRNVVMHNTMITGLLKFGMMEDSKRLFHGMKERDNISWTTMITGLV 249

Query: 405 QNGLNEEAMRIFCEMQRNGVEPDEFTLGSVISSCANLASLEEGAQFH--------SQALV 250
           QNGL EEA+  F +M+ +G+  D++T GSV+++C  L +L EG Q H        +  + 
Sbjct: 250 QNGLEEEAIDFFRQMRLDGIGMDQYTFGSVLTACGGLTALREGKQVHAFIIRSDCTDNVF 309

Query: 249 LANALVTLYGKCGSIEDSHKLFNEMHVKDEVSWTALVSGYAQFGKANQTIDLFERMLDNE 70
           + +ALV +Y KC  +  +  +F  M  K+ VSWTA++ GY Q G + + + +F  M  N 
Sbjct: 310 VGSALVDMYCKCKILRYAEAVFKRMKYKNVVSWTAILVGYGQNGFSEEAVKVFCDMQRNG 369

Query: 69  LKPDGVTFIGVLSACSRAGLVEK 1
           ++PD  T   V+S+C+    +E+
Sbjct: 370 IEPDDFTLGSVISSCANLASLEE 392



 Score =  103 bits (256), Expect = 4e-20
 Identities = 51/145 (35%), Positives = 80/145 (55%)
 Frame = -1

Query: 687 AVDIFREMRYENLSIDQYTFGSVLTACGGLLDLRHGKQIHAYIIRTDYKDNIFVGSALVD 508
           AV +F +M+   +  D +T GSV+++C  L  L  G Q H   + +    +I V +ALV 
Sbjct: 358 AVKVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISSITVSNALVT 417

Query: 507 MYSKCGSIRHAEKVFKRMVHKNIVSWTALLVGYGQNGLNEEAMRIFCEMQRNGVEPDEFT 328
           +Y KCGSI  ++++F  M  ++ VSWTAL+ GY Q G   E + +F  M  +G++PD  T
Sbjct: 418 LYGKCGSIEDSDRLFNEMNFRDEVSWTALISGYAQFGKARETIELFERMLAHGLKPDAVT 477

Query: 327 LGSVISSCANLASLEEGAQFHSQAL 253
              V+ +C+    +  G QF    L
Sbjct: 478 FIGVLLACSRAGLVARGQQFFDSML 502



 Score = 82.4 bits (202), Expect = 8e-14
 Identities = 56/246 (22%), Positives = 110/246 (44%), Gaps = 40/246 (16%)
 Frame = -1

Query: 642 DQYTFGSVLTACGGLLDLRHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVF 463
           + + + +++ A G L ++ + + +   + +     N F  + ++  YSK G +   +++F
Sbjct: 42  EPFLYNNLMNAYGKLGNIAYARHLFDGMPQR----NSFSWNTILSAYSKSGHLPKMKEIF 97

Query: 462 KRMVHKNIVSWTALLVGYGQNGLNEEAMRIFCEMQRNGV-EPDEFTLGSVISSCANLASL 286
             M +++ VSW  +L GY   G   +A++ +  M R+GV   +  T  +++   ++   +
Sbjct: 98  SLMPNRDGVSWNTILSGYASYGSVSDAVKAYNSMMRDGVFNLNRITFSTMLILASSRELV 157

Query: 285 EEGAQFHSQAL---------------------------------------VLANALVTLY 223
           + G Q H   +                                       V+ N ++T  
Sbjct: 158 DLGRQIHGHIMKFGFGGYVFVGSPLVDMYAKTGLVYEAKKVFDEMPDRNVVMHNTMITGL 217

Query: 222 GKCGSIEDSHKLFNEMHVKDEVSWTALVSGYAQFGKANQTIDLFERMLDNELKPDGVTFI 43
            K G +EDS +LF+ M  +D +SWT +++G  Q G   + ID F +M  + +  D  TF 
Sbjct: 218 LKFGMMEDSKRLFHGMKERDNISWTTMITGLVQNGLEEEAIDFFRQMRLDGIGMDQYTFG 277

Query: 42  GVLSAC 25
            VL+AC
Sbjct: 278 SVLTAC 283