BLASTX nr result

ID: Coptis21_contig00025526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025526
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276295.1| PREDICTED: thymocyte nuclear protein 1-like ...   118   4e-25
emb|CAN83372.1| hypothetical protein VITISV_034945 [Vitis vinifera]   118   4e-25
gb|ADN33814.1| hypothetical protein [Cucumis melo subsp. melo]        118   6e-25
ref|XP_002883844.1| hypothetical protein ARALYDRAFT_319455 [Arab...   117   1e-24
ref|XP_003610642.1| Thymocyte nuclear protein [Medicago truncatu...   117   1e-24

>ref|XP_002276295.1| PREDICTED: thymocyte nuclear protein 1-like [Vitis vinifera]
          Length = 158

 Score =  118 bits (296), Expect = 4e-25
 Identities = 52/68 (76%), Positives = 59/68 (86%), Gaps = 3/68 (4%)
 Frame = +1

Query: 76  YWLLKTEPGEWSWEDQEANEGISKWDGVKNKQAQKYMKSMKLGDLCFFYHAGSKSRRFVG 255
           YWLLKTEPGEWSWEDQ ANEG+S WDGVKNKQAQK +K+M LGDLCFFYH+G+K+RR VG
Sbjct: 7   YWLLKTEPGEWSWEDQAANEGLSNWDGVKNKQAQKNLKAMHLGDLCFFYHSGAKARRVVG 66

Query: 256 ---VTKEW 270
              V +EW
Sbjct: 67  VVSVVREW 74


>emb|CAN83372.1| hypothetical protein VITISV_034945 [Vitis vinifera]
          Length = 1471

 Score =  118 bits (296), Expect = 4e-25
 Identities = 52/68 (76%), Positives = 59/68 (86%), Gaps = 3/68 (4%)
 Frame = +1

Query: 76  YWLLKTEPGEWSWEDQEANEGISKWDGVKNKQAQKYMKSMKLGDLCFFYHAGSKSRRFVG 255
           YWLLKTEPGEWSWEDQ ANEG+S WDGVKNKQAQK +K+M LGDLCFFYH+G+K+RR VG
Sbjct: 7   YWLLKTEPGEWSWEDQAANEGLSNWDGVKNKQAQKNLKAMHLGDLCFFYHSGAKARRVVG 66

Query: 256 ---VTKEW 270
              V +EW
Sbjct: 67  VVSVVREW 74


>gb|ADN33814.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 201

 Score =  118 bits (295), Expect = 6e-25
 Identities = 52/73 (71%), Positives = 61/73 (83%), Gaps = 3/73 (4%)
 Frame = +1

Query: 73  QYWLLKTEPGEWSWEDQEANEGISKWDGVKNKQAQKYMKSMKLGDLCFFYHAGSKSRRFV 252
           QYWLLKTEP EWSW DQ AN+G SKWDGVKNKQAQK++KSMKLGD CFFYH+G+K+RR V
Sbjct: 56  QYWLLKTEPAEWSWADQAANDGRSKWDGVKNKQAQKHLKSMKLGDRCFFYHSGAKARRVV 115

Query: 253 G---VTKEWKNGI 282
           G   V +EW + +
Sbjct: 116 GVVAVAREWYSSV 128


>ref|XP_002883844.1| hypothetical protein ARALYDRAFT_319455 [Arabidopsis lyrata subsp.
           lyrata] gi|297329684|gb|EFH60103.1| hypothetical protein
           ARALYDRAFT_319455 [Arabidopsis lyrata subsp. lyrata]
          Length = 155

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/69 (76%), Positives = 59/69 (85%), Gaps = 3/69 (4%)
 Frame = +1

Query: 73  QYWLLKTEPGEWSWEDQEANEGISKWDGVKNKQAQKYMKSMKLGDLCFFYHAGSKSRRFV 252
           QYWLLKTEP EWSW DQEAN GISKWDGVKNKQAQK +KSM LGDLCFFYH+G+K+R  V
Sbjct: 6   QYWLLKTEPSEWSWSDQEANGGISKWDGVKNKQAQKNLKSMTLGDLCFFYHSGTKARCVV 65

Query: 253 G---VTKEW 270
           G   V++EW
Sbjct: 66  GVVEVSREW 74


>ref|XP_003610642.1| Thymocyte nuclear protein [Medicago truncatula]
           gi|355511977|gb|AES93600.1| Thymocyte nuclear protein
           [Medicago truncatula]
          Length = 146

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/80 (71%), Positives = 61/80 (76%), Gaps = 3/80 (3%)
 Frame = +1

Query: 79  WLLKTEPGEWSWEDQEANEGISKWDGVKNKQAQKYMKSMKLGDLCFFYHAGSKSRRFVG- 255
           +LLKTEP EWSWEDQEAN GISKWDGVKNKQAQKY+KSM L DLCFFYH+G KSRR VG 
Sbjct: 8   FLLKTEPSEWSWEDQEANGGISKWDGVKNKQAQKYLKSMSLNDLCFFYHSGPKSRRIVGV 67

Query: 256 --VTKEWKNGILTSGFDDND 309
             V KEW        + DND
Sbjct: 68  VSVVKEW--------YTDND 79


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