BLASTX nr result

ID: Coptis21_contig00025468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025468
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633433.1| PREDICTED: BTB/POZ domain-containing protein...   113   2e-23
ref|XP_003632782.1| PREDICTED: BTB/POZ domain-containing protein...   106   2e-21
emb|CBI25397.3| unnamed protein product [Vitis vinifera]              105   5e-21
emb|CAN69253.1| hypothetical protein VITISV_038147 [Vitis vinifera]    99   4e-19
ref|XP_002520826.1| protein binding protein, putative [Ricinus c...    95   5e-18

>ref|XP_003633433.1| PREDICTED: BTB/POZ domain-containing protein At3g56230-like [Vitis
           vinifera]
          Length = 270

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/111 (51%), Positives = 78/111 (70%), Gaps = 9/111 (8%)
 Frame = +3

Query: 3   NLLCISCYEGTKGLLTFVS--------NNVDTNSVSQSNIAKGFANVLKLITEMKEREEM 158
           N +C +CYE  + ++ F++        +  + + VS +N +KGF+N LK + EMKE EE 
Sbjct: 18  NTICAACYESARSIVAFINKLENDKGFDKSNNSIVSPANSSKGFSNALKWVKEMKEIEEE 77

Query: 159 LNDKLSFLSGLVVAFKDEIHTDIQVKPS-NGPSIPAHRSLLAARSTIFKNV 308
           LN+KLSFL G   AF+D+IHTDI+VKP  NGPS+ AHR+LLAARS IFKN+
Sbjct: 78  LNEKLSFLGGFAAAFRDQIHTDIEVKPGHNGPSLFAHRALLAARSEIFKNM 128


>ref|XP_003632782.1| PREDICTED: BTB/POZ domain-containing protein At3g56230-like [Vitis
           vinifera]
          Length = 216

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/111 (48%), Positives = 75/111 (67%), Gaps = 9/111 (8%)
 Frame = +3

Query: 3   NLLCISCYEGTKGLLTFVS--------NNVDTNSVSQSNIAKGFANVLKLITEMKEREEM 158
           N +C +CYE  + ++ F++        +  + ++V  +N +KGF+N LK + EMKE EE 
Sbjct: 8   NTICAACYENARSIVAFINKFENDKGFDKSNNSTVFPANSSKGFSNALKWVQEMKEIEEE 67

Query: 159 LNDKLSFLSGLVVAFKDEIHTDIQVKPS-NGPSIPAHRSLLAARSTIFKNV 308
           LN+KLSFL G   AF D+IHT I+VKP  NGPS+ AHR+LLA RS IFKN+
Sbjct: 68  LNEKLSFLGGFAAAFGDQIHTHIEVKPGHNGPSLFAHRTLLATRSEIFKNM 118


>emb|CBI25397.3| unnamed protein product [Vitis vinifera]
          Length = 281

 Score =  105 bits (261), Expect = 5e-21
 Identities = 57/122 (46%), Positives = 76/122 (62%), Gaps = 20/122 (16%)
 Frame = +3

Query: 3   NLLCISCYEGTKGLLTFV-----------SNNVDTNSVSQSNIA--------KGFANVLK 125
           N +C +CYE  + ++ F+           SNN   +  + S +         +GF+N LK
Sbjct: 18  NTICAACYESARSIVAFINKLENDKGFDKSNNSIVSPANSSKVIVELWNGCNQGFSNALK 77

Query: 126 LITEMKEREEMLNDKLSFLSGLVVAFKDEIHTDIQVKPS-NGPSIPAHRSLLAARSTIFK 302
            + EMKE EE LN+KLSFL G   AF+D+IHTDI+VKP  NGPS+ AHR+LLAARS IFK
Sbjct: 78  WVKEMKEIEEELNEKLSFLGGFAAAFRDQIHTDIEVKPGHNGPSLFAHRALLAARSEIFK 137

Query: 303 NV 308
           N+
Sbjct: 138 NM 139


>emb|CAN69253.1| hypothetical protein VITISV_038147 [Vitis vinifera]
          Length = 611

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/111 (47%), Positives = 72/111 (64%), Gaps = 9/111 (8%)
 Frame = +3

Query: 3   NLLCISCYEGTKGLLTFVSNNVD--------TNSVSQSNIAKGFANVLKLITEMKEREEM 158
           N +  +CYE  + ++ F++   D         ++V  +N +KGF+N LK + EMKE EE 
Sbjct: 291 NTISEACYENARSIVAFINKFEDDKGFDKSNNSTVFPANSSKGFSNALKWVQEMKEIEEE 350

Query: 159 LNDKLSFLSGLVVAFKDEIHTDIQVKPS-NGPSIPAHRSLLAARSTIFKNV 308
           LN+KLSFL G   AF D+IHT I+VKP  NGPS+ AH +LLA RS IFKN+
Sbjct: 351 LNEKLSFLEGFAAAFGDQIHTHIEVKPGHNGPSLFAHITLLATRSEIFKNM 401


>ref|XP_002520826.1| protein binding protein, putative [Ricinus communis]
           gi|223539957|gb|EEF41535.1| protein binding protein,
           putative [Ricinus communis]
          Length = 267

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 51/106 (48%), Positives = 73/106 (68%), Gaps = 4/106 (3%)
 Frame = +3

Query: 3   NLLCISCYEGTKGLLTFVSNNVDTNSVSQ---SNIAKGFANVLKLITEMKEREEMLNDKL 173
           N +C +CYEG K ++T + N  D++  S    S++ +  ANV K +  MKE E+ LN+K+
Sbjct: 18  NTICGACYEGAKTVITLM-NKFDSDKGSDRPISSVPQPLANVAKWMNNMKETEDELNEKI 76

Query: 174 SFLSGLVVAFKDEIHTDIQVKPSN-GPSIPAHRSLLAARSTIFKNV 308
           +FLSG V  F+ +I TDIQ+ P N GPS+ AHR+LLAARS IF+N+
Sbjct: 77  NFLSGFVALFRQQILTDIQLIPGNGGPSVSAHRALLAARSEIFRNM 122


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