BLASTX nr result

ID: Coptis21_contig00025405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025405
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267934.1| PREDICTED: peroxisomal membrane protein 11-4...   296   3e-78
ref|XP_004148144.1| PREDICTED: peroxisomal membrane protein 11-4...   293   2e-77
emb|CAN67008.1| hypothetical protein VITISV_028688 [Vitis vinifera]   292   5e-77
ref|XP_002510956.1| peroxisomal biogenesis factor, putative [Ric...   288   9e-76
ref|XP_002326800.1| predicted protein [Populus trichocarpa] gi|2...   283   2e-74

>ref|XP_002267934.1| PREDICTED: peroxisomal membrane protein 11-4 [Vitis vinifera]
           gi|296084211|emb|CBI24599.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  296 bits (757), Expect = 3e-78
 Identities = 144/188 (76%), Positives = 166/188 (88%), Gaps = 1/188 (0%)
 Frame = -2

Query: 562 MNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVETSHPGGAQRAKQWEVASGLSRKA 383
           MNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVE +HP  A +AKQWEVASGLSRKA
Sbjct: 1   MNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEAAHPDAAHKAKQWEVASGLSRKA 60

Query: 382 FRTGRFLTGFNALRRNPGSKPTFRYLTVLANAGEMVYFFFDHFLWLARVGVIDKDLARRM 203
           FR+GRFLTGFNALRRNPGS PTFR+L VLANAGEMVYFFFDHFLWL+R+GV+D  LARRM
Sbjct: 61  FRSGRFLTGFNALRRNPGSTPTFRFLAVLANAGEMVYFFFDHFLWLSRIGVLDAKLARRM 120

Query: 202 SFISAFGEAFGYVFFVISDLIIIKEGLDAQREL-SRKAELSDDNQLERIKKIRADRLMRL 26
           SFISAFGE+FGY+FF+ISD I+IK G++ +R+L +   + S D+    ++KIR DR+MRL
Sbjct: 121 SFISAFGESFGYIFFIISDFIMIKGGVEQERKLITTSTDKSTDDVKASVRKIREDRVMRL 180

Query: 25  MAIAANVA 2
           MA+AANVA
Sbjct: 181 MAVAANVA 188


>ref|XP_004148144.1| PREDICTED: peroxisomal membrane protein 11-4-like [Cucumis sativus]
           gi|449516001|ref|XP_004165036.1| PREDICTED: peroxisomal
           membrane protein 11-4-like [Cucumis sativus]
          Length = 227

 Score =  293 bits (750), Expect = 2e-77
 Identities = 139/188 (73%), Positives = 169/188 (89%), Gaps = 1/188 (0%)
 Frame = -2

Query: 562 MNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVETSHPGGAQRAKQWEVASGLSRKA 383
           MNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWH+ETSHP  A RAK WEVASG+SRKA
Sbjct: 1   MNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHLETSHPDKATRAKNWEVASGISRKA 60

Query: 382 FRTGRFLTGFNALRRNPGSKPTFRYLTVLANAGEMVYFFFDHFLWLARVGVIDKDLARRM 203
           FRTGRFLTGFNALRR+PGS PTF++L VLANAGEMVYFFFDH LWL+R+G +D  LA++M
Sbjct: 61  FRTGRFLTGFNALRRSPGSTPTFQFLAVLANAGEMVYFFFDHLLWLSRIGTLDAKLAKKM 120

Query: 202 SFISAFGEAFGYVFFVISDLIIIKEGLDAQREL-SRKAELSDDNQLERIKKIRADRLMRL 26
           SFISAFGE+FGY+FF+++D+I++K G++A+R+L S K +  +D++ E I KI++DR+MRL
Sbjct: 121 SFISAFGESFGYIFFIVADVIMLKRGIEAERKLRSSKEDSKEDSKEESINKIKSDRIMRL 180

Query: 25  MAIAANVA 2
           MA+AANVA
Sbjct: 181 MAVAANVA 188


>emb|CAN67008.1| hypothetical protein VITISV_028688 [Vitis vinifera]
          Length = 227

 Score =  292 bits (747), Expect = 5e-77
 Identities = 143/188 (76%), Positives = 164/188 (87%), Gaps = 1/188 (0%)
 Frame = -2

Query: 562 MNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVETSHPGGAQRAKQWEVASGLSRKA 383
           MNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVE +HP  A  AKQWEVASGLSRKA
Sbjct: 1   MNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEAAHPDAAXXAKQWEVASGLSRKA 60

Query: 382 FRTGRFLTGFNALRRNPGSKPTFRYLTVLANAGEMVYFFFDHFLWLARVGVIDKDLARRM 203
           FR+GRFLTGFNALRRNPGS PTFR+L VLANAGEMVYFFFDHFLWL+R+GV+D  LA RM
Sbjct: 61  FRSGRFLTGFNALRRNPGSTPTFRFLAVLANAGEMVYFFFDHFLWLSRIGVLDAKLAXRM 120

Query: 202 SFISAFGEAFGYVFFVISDLIIIKEGLDAQREL-SRKAELSDDNQLERIKKIRADRLMRL 26
           SFISAFGE+FGY+FF+ISD I+IK G++ +R+L +   + S D+    ++KIR DR+MRL
Sbjct: 121 SFISAFGESFGYIFFIISDFIMIKGGVEQERKLITTSTDKSTDDVKASVRKIREDRVMRL 180

Query: 25  MAIAANVA 2
           MA+AANVA
Sbjct: 181 MAVAANVA 188


>ref|XP_002510956.1| peroxisomal biogenesis factor, putative [Ricinus communis]
           gi|223550071|gb|EEF51558.1| peroxisomal biogenesis
           factor, putative [Ricinus communis]
          Length = 226

 Score =  288 bits (736), Expect = 9e-76
 Identities = 141/187 (75%), Positives = 160/187 (85%)
 Frame = -2

Query: 562 MNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVETSHPGGAQRAKQWEVASGLSRKA 383
           MNDTVDKLV+FLAKRDGIDKLVKTFQYVSKLV+WH E+ HP  AQR KQWEVASGLSRKA
Sbjct: 1   MNDTVDKLVVFLAKRDGIDKLVKTFQYVSKLVNWHAESKHPEIAQRFKQWEVASGLSRKA 60

Query: 382 FRTGRFLTGFNALRRNPGSKPTFRYLTVLANAGEMVYFFFDHFLWLARVGVIDKDLARRM 203
           FRTGRFLTGFNALRR PGS  TFR+L VLANAGEMVYFFFDHFLWL+R+G +D  LA+RM
Sbjct: 61  FRTGRFLTGFNALRRGPGSSTTFRFLAVLANAGEMVYFFFDHFLWLSRIGTLDAKLAKRM 120

Query: 202 SFISAFGEAFGYVFFVISDLIIIKEGLDAQRELSRKAELSDDNQLERIKKIRADRLMRLM 23
           SFISAFGE+FGY+FFVI+D I+I+EG+  +R+L    E       E IKKIRADR+MRLM
Sbjct: 121 SFISAFGESFGYIFFVIADFIMIREGIRKERKLVSTKEDDPKEVQENIKKIRADRVMRLM 180

Query: 22  AIAANVA 2
           A+AAN+A
Sbjct: 181 AVAANIA 187


>ref|XP_002326800.1| predicted protein [Populus trichocarpa] gi|222834122|gb|EEE72599.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  283 bits (725), Expect = 2e-74
 Identities = 141/189 (74%), Positives = 161/189 (85%), Gaps = 2/189 (1%)
 Frame = -2

Query: 562 MNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVETSHPGGAQRAKQWEVASGLSRKA 383
           MNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVE +HP  A R KQWEVASGL RKA
Sbjct: 1   MNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVHWHVEATHPDAAMRFKQWEVASGLGRKA 60

Query: 382 FRTGRFLTGFNALRRNPGSKPTFRYLTVLANAGEMVYFFFDHFLWLARVGVIDKDLARRM 203
           FRTGRFLTGFNALRR PG+ PT + L VLANAGEMVYFFFDHFLWL+R+G +D  LARRM
Sbjct: 61  FRTGRFLTGFNALRRGPGATPTLKVLAVLANAGEMVYFFFDHFLWLSRIGTLDAKLARRM 120

Query: 202 SFISAFGEAFGYVFFVISDLIIIKEGLDAQREL--SRKAELSDDNQLERIKKIRADRLMR 29
           SFISA GE+FGY+FF+I+D II+KEGL+ +R L  S K + S+D + E  +KIR +R+MR
Sbjct: 121 SFISALGESFGYIFFIIADFIIMKEGLETERRLLISSKEDGSEDAK-ESTRKIRVERVMR 179

Query: 28  LMAIAANVA 2
           LMA+AANVA
Sbjct: 180 LMAVAANVA 188


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