BLASTX nr result

ID: Coptis21_contig00025401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025401
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36825.3| unnamed protein product [Vitis vinifera]              185   3e-45
ref|XP_002263353.1| PREDICTED: putative indole-3-acetic acid-ami...   185   3e-45
ref|XP_002531876.1| Indole-3-acetic acid-amido synthetase GH3.17...   185   4e-45
ref|XP_002302704.1| GH3 family protein [Populus trichocarpa] gi|...   182   3e-44
ref|XP_002882130.1| auxin-responsive GH3 family protein [Arabido...   174   9e-42

>emb|CBI36825.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  185 bits (470), Expect = 3e-45
 Identities = 90/115 (78%), Positives = 100/115 (86%)
 Frame = -2

Query: 350 LKEILKQNGLTEYLNKYLDGSTEVSAFKSLVPVITYADIRPYIQRIANGEDSSLISGQTI 171
           LKEI+ +N  TEYL KY+ GS +V  FK  VPVITY DI PYIQRIANGEDSSLISG  I
Sbjct: 32  LKEIIARNCETEYLKKYMGGSKDVLEFKQSVPVITYKDIHPYIQRIANGEDSSLISGHPI 91

Query: 170 TEMLCSSGTSAGEPKLMPSVAEDLDRRTFLYNLIMPIINQYVPGLDEGKAMYLYF 6
           TEMLCSSGTS GEPK+MPS+AEDL+RRTFLYNLIMPI+NQY+PGLDEGKAM+LYF
Sbjct: 92  TEMLCSSGTSGGEPKMMPSIAEDLNRRTFLYNLIMPIMNQYIPGLDEGKAMFLYF 146


>ref|XP_002263353.1| PREDICTED: putative indole-3-acetic acid-amido synthetase GH3.9
           [Vitis vinifera]
          Length = 596

 Score =  185 bits (470), Expect = 3e-45
 Identities = 90/115 (78%), Positives = 100/115 (86%)
 Frame = -2

Query: 350 LKEILKQNGLTEYLNKYLDGSTEVSAFKSLVPVITYADIRPYIQRIANGEDSSLISGQTI 171
           LKEI+ +N  TEYL KY+ GS +V  FK  VPVITY DI PYIQRIANGEDSSLISG  I
Sbjct: 32  LKEIIARNCETEYLKKYMGGSKDVLEFKQSVPVITYKDIHPYIQRIANGEDSSLISGHPI 91

Query: 170 TEMLCSSGTSAGEPKLMPSVAEDLDRRTFLYNLIMPIINQYVPGLDEGKAMYLYF 6
           TEMLCSSGTS GEPK+MPS+AEDL+RRTFLYNLIMPI+NQY+PGLDEGKAM+LYF
Sbjct: 92  TEMLCSSGTSGGEPKMMPSIAEDLNRRTFLYNLIMPIMNQYIPGLDEGKAMFLYF 146


>ref|XP_002531876.1| Indole-3-acetic acid-amido synthetase GH3.17, putative [Ricinus
           communis] gi|223528484|gb|EEF30513.1| Indole-3-acetic
           acid-amido synthetase GH3.17, putative [Ricinus
           communis]
          Length = 597

 Score =  185 bits (469), Expect = 4e-45
 Identities = 89/115 (77%), Positives = 101/115 (87%)
 Frame = -2

Query: 350 LKEILKQNGLTEYLNKYLDGSTEVSAFKSLVPVITYADIRPYIQRIANGEDSSLISGQTI 171
           L+EIL QNG TEYL+KY+ GS +V  FK  VPV TY D+ PYIQRIANGEDSSLI+G+ I
Sbjct: 32  LREILIQNGQTEYLSKYIKGSKDVKEFKYCVPVTTYKDMYPYIQRIANGEDSSLITGRPI 91

Query: 170 TEMLCSSGTSAGEPKLMPSVAEDLDRRTFLYNLIMPIINQYVPGLDEGKAMYLYF 6
           TEMLCSSGTSAGEPKLMPS+ EDLDRRTF+YNL+MPI+NQY+ GLDEGKAMYLYF
Sbjct: 92  TEMLCSSGTSAGEPKLMPSINEDLDRRTFIYNLVMPIMNQYISGLDEGKAMYLYF 146


>ref|XP_002302704.1| GH3 family protein [Populus trichocarpa]
           gi|222844430|gb|EEE81977.1| GH3 family protein [Populus
           trichocarpa]
          Length = 596

 Score =  182 bits (461), Expect = 3e-44
 Identities = 88/115 (76%), Positives = 100/115 (86%)
 Frame = -2

Query: 350 LKEILKQNGLTEYLNKYLDGSTEVSAFKSLVPVITYADIRPYIQRIANGEDSSLISGQTI 171
           LK IL QNG TEYL+KY+ GS +V  FK  VPVITY D+ PYIQRIA GEDSSL++G  +
Sbjct: 32  LKAILMQNGETEYLSKYMKGSKDVDEFKFHVPVITYKDVCPYIQRIATGEDSSLVTGHPV 91

Query: 170 TEMLCSSGTSAGEPKLMPSVAEDLDRRTFLYNLIMPIINQYVPGLDEGKAMYLYF 6
           TEMLCSSGTSAGEPKLMPS+AEDLDRRTF+YNLIMPI+NQY+ GLDEGKAM+LYF
Sbjct: 92  TEMLCSSGTSAGEPKLMPSIAEDLDRRTFVYNLIMPIMNQYIFGLDEGKAMFLYF 146


>ref|XP_002882130.1| auxin-responsive GH3 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297327969|gb|EFH58389.1| auxin-responsive GH3
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 589

 Score =  174 bits (440), Expect = 9e-42
 Identities = 83/112 (74%), Positives = 99/112 (88%)
 Frame = -2

Query: 341 ILKQNGLTEYLNKYLDGSTEVSAFKSLVPVITYADIRPYIQRIANGEDSSLISGQTITEM 162
           IL++N  TEYL+KY+ GS +V  FK  VP+ITY DI PYIQRIANGEDSSLI+G  ITE+
Sbjct: 37  ILERNKDTEYLSKYMKGSKDVVEFKRSVPIITYKDIYPYIQRIANGEDSSLITGHPITEI 96

Query: 161 LCSSGTSAGEPKLMPSVAEDLDRRTFLYNLIMPIINQYVPGLDEGKAMYLYF 6
           LCSSGTSAGEPKLMP+++EDLDRRTFLYNLI+PI+N+Y+PGLD+GKAMYL F
Sbjct: 97  LCSSGTSAGEPKLMPTISEDLDRRTFLYNLIIPIVNKYIPGLDKGKAMYLNF 148


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