BLASTX nr result

ID: Coptis21_contig00025367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025367
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284666.1| PREDICTED: uncharacterized protein LOC100259...   191   4e-47
ref|XP_002527791.1| conserved hypothetical protein [Ricinus comm...   188   3e-46
ref|XP_004150114.1| PREDICTED: uncharacterized protein LOC101218...   170   1e-40
ref|XP_002887327.1| hypothetical protein ARALYDRAFT_894894 [Arab...   169   2e-40
ref|NP_177233.1| inorganic carbon transport protein-related prot...   168   4e-40

>ref|XP_002284666.1| PREDICTED: uncharacterized protein LOC100259429 [Vitis vinifera]
           gi|297737670|emb|CBI26871.3| unnamed protein product
           [Vitis vinifera]
          Length = 188

 Score =  191 bits (486), Expect = 4e-47
 Identities = 85/106 (80%), Positives = 96/106 (90%)
 Frame = -2

Query: 321 SLAIEVGAILAAVEQPALAVTGVNNQEDFTWTLIQLGIVAFWYFLIMPPIILNWLRLRWY 142
           SLAI+VGA+LA VE+PA AVTGVN + D  W LIQLGIV FWYFLIMPPII+NWLR+RWY
Sbjct: 61  SLAIQVGALLATVEKPAFAVTGVNKEVDLIWVLIQLGIVLFWYFLIMPPIIMNWLRIRWY 120

Query: 141 KRMLLEMYLQFMFVFMFFPGVLLWAPFVNFRRLPRDPTMKYPWSTP 4
           +R LLEMYLQFMFVFMFFPGV+LWAPF+NFR+ PRDP+MKYPWSTP
Sbjct: 121 ERNLLEMYLQFMFVFMFFPGVMLWAPFLNFRKFPRDPSMKYPWSTP 166


>ref|XP_002527791.1| conserved hypothetical protein [Ricinus communis]
           gi|223532826|gb|EEF34601.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 187

 Score =  188 bits (478), Expect = 3e-46
 Identities = 82/109 (75%), Positives = 95/109 (87%)
 Frame = -2

Query: 330 KASSLAIEVGAILAAVEQPALAVTGVNNQEDFTWTLIQLGIVAFWYFLIMPPIILNWLRL 151
           K  SLA+++GA  A VEQ ALAVTGVNN+ED TW LIQ  IVAFWYFLIMPPII+NW+R+
Sbjct: 57  KKFSLAVQLGAFFATVEQSALAVTGVNNEEDLTWVLIQSAIVAFWYFLIMPPIIMNWMRV 116

Query: 150 RWYKRMLLEMYLQFMFVFMFFPGVLLWAPFVNFRRLPRDPTMKYPWSTP 4
           RWY+R L EMYLQFMF F+FFPG+LLWAPF+NFR+ PRDP+MKYPWSTP
Sbjct: 117 RWYRRKLFEMYLQFMFTFIFFPGILLWAPFLNFRKFPRDPSMKYPWSTP 165


>ref|XP_004150114.1| PREDICTED: uncharacterized protein LOC101218173 [Cucumis sativus]
           gi|449519300|ref|XP_004166673.1| PREDICTED:
           uncharacterized protein LOC101224267 [Cucumis sativus]
          Length = 201

 Score =  170 bits (430), Expect = 1e-40
 Identities = 75/111 (67%), Positives = 92/111 (82%), Gaps = 1/111 (0%)
 Frame = -2

Query: 333 QKASSLAIEVGAILAAVEQPALAVTGVNNQE-DFTWTLIQLGIVAFWYFLIMPPIILNWL 157
           +K +SLA+ + A LA V +PA AVTG NN E   TW L QLG++ F+YFL+ PPII+NWL
Sbjct: 68  KKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFPPIIMNWL 127

Query: 156 RLRWYKRMLLEMYLQFMFVFMFFPGVLLWAPFVNFRRLPRDPTMKYPWSTP 4
           R+RWY+R LLEMYLQFM VF+FFPG+LLWAPF+NFR+ PRDP+MKYPWSTP
Sbjct: 128 RIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTP 178


>ref|XP_002887327.1| hypothetical protein ARALYDRAFT_894894 [Arabidopsis lyrata subsp.
           lyrata] gi|297333168|gb|EFH63586.1| hypothetical protein
           ARALYDRAFT_894894 [Arabidopsis lyrata subsp. lyrata]
          Length = 191

 Score =  169 bits (429), Expect = 2e-40
 Identities = 70/113 (61%), Positives = 94/113 (83%)
 Frame = -2

Query: 342 LWPQKASSLAIEVGAILAAVEQPALAVTGVNNQEDFTWTLIQLGIVAFWYFLIMPPIILN 163
           L+  K + LA ++GA+LA ++ PALA+TGVNNQ++ +  ++ +GI++ WYFL+MPPII+N
Sbjct: 55  LFGAKKTVLAAQLGAVLATIDHPALAITGVNNQQELSSVVLDIGIISVWYFLVMPPIIMN 114

Query: 162 WLRLRWYKRMLLEMYLQFMFVFMFFPGVLLWAPFVNFRRLPRDPTMKYPWSTP 4
           WLR+RWY+R   EMYLQFMFVFMFFPG+LLWAPF+NFR+ PRDP+MK PW  P
Sbjct: 115 WLRVRWYRRKFFEMYLQFMFVFMFFPGLLLWAPFLNFRKFPRDPSMKNPWDKP 167


>ref|NP_177233.1| inorganic carbon transport protein-related protein [Arabidopsis
           thaliana] gi|12324754|gb|AAG52336.1|AC011663_15 unknown
           protein; 17323-16389 [Arabidopsis thaliana]
           gi|37202090|gb|AAQ89660.1| At1g70760 [Arabidopsis
           thaliana] gi|332196990|gb|AEE35111.1| inorganic carbon
           transport protein-related protein [Arabidopsis thaliana]
          Length = 191

 Score =  168 bits (426), Expect = 4e-40
 Identities = 69/109 (63%), Positives = 91/109 (83%)
 Frame = -2

Query: 330 KASSLAIEVGAILAAVEQPALAVTGVNNQEDFTWTLIQLGIVAFWYFLIMPPIILNWLRL 151
           K + LA ++GA+LA ++ PALA+TGVNNQ++ +  ++ +GI++ WYFL+MPPII+NWLR+
Sbjct: 59  KKTILAAQLGAVLATIDHPALAITGVNNQQELSSVVLDIGIISVWYFLVMPPIIMNWLRV 118

Query: 150 RWYKRMLLEMYLQFMFVFMFFPGVLLWAPFVNFRRLPRDPTMKYPWSTP 4
           RWY+R   EMYLQFMFVFMFFPG+LLWAPF+NFR+ PRDP MK PW  P
Sbjct: 119 RWYRRKFFEMYLQFMFVFMFFPGLLLWAPFLNFRKFPRDPNMKNPWDKP 167


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