BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025285
         (1193 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like ...   209   8e-52
ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like ...   209   8e-52
ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|2...   190   5e-46
ref|XP_002328624.1| predicted protein [Populus trichocarpa] gi|2...   179   1e-42
gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x P...   179   2e-42

>ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 2 [Vitis
           vinifera]
          Length = 320

 Score =  209 bits (533), Expect = 8e-52
 Identities = 134/297 (45%), Positives = 157/297 (52%), Gaps = 19/297 (6%)
 Frame = +2

Query: 83  YALSGKIMLSAXXXXXXXXXXXXXXHIYARWYXXXXXXXXXXXXXXXXPHIIFXXXXXXX 262
           YALSGKIMLSA              HIYARWY                 H++F       
Sbjct: 23  YALSGKIMLSAIVILFAVVVLMVCLHIYARWYLYRTRRRHHARARRRH-HLVFYVDPTNP 81

Query: 263 XIS-----QGLDASLLKSLPTFIYTSNSHENDALECAVCLSEFEENEKGRLLPKCNHSFH 427
             S     +GLDAS+L SLP F+Y+S +H  D  ECAVCLSEFEENEKGR LPKCNHSFH
Sbjct: 82  AASVSSPTRGLDASILNSLPVFVYSSKTH-TDMSECAVCLSEFEENEKGRRLPKCNHSFH 140

Query: 428 IGCIDMWFNSHSTCPLCRSPVTIPEPENNQQTPIQIVVHSPNTQQPETPSSIL------X 589
           IGCIDMWF+SHSTCPLCRS V     E+  + P  +V+    T+   T +          
Sbjct: 141 IGCIDMWFHSHSTCPLCRSAVNAETSESASRNPTDVVISMAETEGGSTSALCSTCQHDED 200

Query: 590 XXXXXXXXXXXXXXXXXXXXXAFELAGVVSIEVPRRNESFKNLEEGSPLGS---QVFKSP 760
                                + ELAG VSIEVPRRNE+F   E+ S L S   +V KSP
Sbjct: 201 RTGRLRTSSSVGSSSVGSRRKSSELAG-VSIEVPRRNENFGLSEDESLLDSPATRVQKSP 259

Query: 761 GGRIRSFKRILSRDRKQPSTPMS----CCSSAAAIEIDLERG-ENEEQAQQASSPTP 916
           G RI S KRILSRDRK   +P S     C S    E D+ERG E+ +Q Q  + P P
Sbjct: 260 GSRILSLKRILSRDRKSMLSPTSVPGVSCGSVTEFEADIERGTEDTQQIQTQTQPQP 316


>ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 1 [Vitis
           vinifera]
          Length = 317

 Score =  209 bits (533), Expect = 8e-52
 Identities = 134/297 (45%), Positives = 157/297 (52%), Gaps = 19/297 (6%)
 Frame = +2

Query: 83  YALSGKIMLSAXXXXXXXXXXXXXXHIYARWYXXXXXXXXXXXXXXXXPHIIFXXXXXXX 262
           YALSGKIMLSA              HIYARWY                 H++F       
Sbjct: 20  YALSGKIMLSAIVILFAVVVLMVCLHIYARWYLYRTRRRHHARARRRH-HLVFYVDPTNP 78

Query: 263 XIS-----QGLDASLLKSLPTFIYTSNSHENDALECAVCLSEFEENEKGRLLPKCNHSFH 427
             S     +GLDAS+L SLP F+Y+S +H  D  ECAVCLSEFEENEKGR LPKCNHSFH
Sbjct: 79  AASVSSPTRGLDASILNSLPVFVYSSKTH-TDMSECAVCLSEFEENEKGRRLPKCNHSFH 137

Query: 428 IGCIDMWFNSHSTCPLCRSPVTIPEPENNQQTPIQIVVHSPNTQQPETPSSIL------X 589
           IGCIDMWF+SHSTCPLCRS V     E+  + P  +V+    T+   T +          
Sbjct: 138 IGCIDMWFHSHSTCPLCRSAVNAETSESASRNPTDVVISMAETEGGSTSALCSTCQHDED 197

Query: 590 XXXXXXXXXXXXXXXXXXXXXAFELAGVVSIEVPRRNESFKNLEEGSPLGS---QVFKSP 760
                                + ELAG VSIEVPRRNE+F   E+ S L S   +V KSP
Sbjct: 198 RTGRLRTSSSVGSSSVGSRRKSSELAG-VSIEVPRRNENFGLSEDESLLDSPATRVQKSP 256

Query: 761 GGRIRSFKRILSRDRKQPSTPMS----CCSSAAAIEIDLERG-ENEEQAQQASSPTP 916
           G RI S KRILSRDRK   +P S     C S    E D+ERG E+ +Q Q  + P P
Sbjct: 257 GSRILSLKRILSRDRKSMLSPTSVPGVSCGSVTEFEADIERGTEDTQQIQTQTQPQP 313


>ref|XP_002315508.1| predicted protein [Populus trichocarpa] gi|222864548|gb|EEF01679.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  190 bits (483), Expect = 5e-46
 Identities = 115/279 (41%), Positives = 151/279 (54%), Gaps = 12/279 (4%)
 Frame = +2

Query: 83  YALSGKIMLSAXXXXXXXXXXXXXXHIYARWYXXXXXXXXXXXXXXXXPHIIFXXXXXXX 262
           +ALSGKIMLSA              H YARWY                 H++F       
Sbjct: 1   FALSGKIMLSAVVILFLVIILMVCLHFYARWYLIRARRRHIRHARNRRNHLVFYVDSAHN 60

Query: 263 X------ISQGLDASLLKSLPTFIYTSNSHENDALECAVCLSEFEENEKGRLLPKCNHSF 424
                  +++GL+ ++LKSLP F+Y+  +H+ D++ECAVCLSEF+ENE GR LPKCNHSF
Sbjct: 61  PTIVTTQVTRGLEETVLKSLPVFVYSEKTHQ-DSMECAVCLSEFQENETGRTLPKCNHSF 119

Query: 425 HIGCIDMWFNSHSTCPLCRSPVTIPEPENNQQTPIQIVVHSPNTQQPETPSSILXXXXXX 604
           HIGCIDMWF+SHSTCPLCRSPV  P  EN  Q      +  P +      SS        
Sbjct: 120 HIGCIDMWFHSHSTCPLCRSPVE-PVTENPVQDGPGYGISVPGSGS----SSGTMCQHEE 174

Query: 605 XXXXXXXXXXXXXXXXAFELAGVVSIEVPRRNESFKN-LEEGSPLGSQVFKSPGGRIRSF 781
                             EL G V+IEVPRRN +F++     SP  S  F+SP  R+ SF
Sbjct: 175 DRVGSASTSSFNDRRKQMELIG-VTIEVPRRNGNFEDESNTESPSASHAFRSPMSRMLSF 233

Query: 782 KRILSRDRKQPSTP-----MSCCSSAAAIEIDLERGENE 883
           KR+LSR+R+  ++P     +SC   +   E+D+ERG++E
Sbjct: 234 KRMLSRERRGTASPNVATSVSCGGESGTTEMDVERGQDE 272


>ref|XP_002328624.1| predicted protein [Populus trichocarpa] gi|222838606|gb|EEE76971.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  179 bits (454), Expect = 1e-42
 Identities = 111/286 (38%), Positives = 145/286 (50%), Gaps = 12/286 (4%)
 Frame = +2

Query: 77  EKYALSGKIMLSAXXXXXXXXXXXXXXHIYARWYXXXXXXXXXXXXXXXXPHIIFXXXXX 256
           E YALSGKIMLSA              H+YARWY                 H++F     
Sbjct: 14  EGYALSGKIMLSAIVILFFVVILMVFLHLYARWYLTRARQRQVRRVRNRRTHLVFYVDSA 73

Query: 257 XXX------ISQGLDASLLKSLPTFIYTSNSHENDALECAVCLSEFEENEKGRLLPKCNH 418
                    +++GL+ ++  SLP F+Y+  +H+ D++ECAVCLSEFEENE+GR+LPKCNH
Sbjct: 74  QDPNNVTSHVTRGLEETVKNSLPVFVYSRKTHQ-DSIECAVCLSEFEENERGRVLPKCNH 132

Query: 419 SFHIGCIDMWFNSHSTCPLCRSPVTIPEPENNQQTPIQIVVHSPNTQQPETPSSILXXXX 598
           SFH  CIDMWF+SHSTCPLCRSPV  P  EN        V    N    E  S +     
Sbjct: 133 SFHTECIDMWFHSHSTCPLCRSPVE-PVAENP-------VPEGSNFGISEAGSGLCTSCQ 184

Query: 599 XXXXXXXXXXXXXXXXXXAFELAGVVSIEVPRRNESFKN-LEEGSPLGSQVFKSPGGRIR 775
                                    V+I+VPRRN +F++     SP  S  F+SP  R+ 
Sbjct: 185 HEEDHVGSASTSSFNDGRKPVGLIGVTIDVPRRNGNFEDESNTESPSASHSFRSPMSRML 244

Query: 776 SFKRILSRDRKQPSTP-----MSCCSSAAAIEIDLERGENEEQAQQ 898
           SFKR+LSR+R+   +P     +SC   +   E D+E G +E   QQ
Sbjct: 245 SFKRMLSRERRGTVSPTVANSVSCGGGSGTTEFDIEHGRDESMPQQ 290


>gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x Populus alba]
          Length = 293

 Score =  179 bits (453), Expect = 2e-42
 Identities = 111/286 (38%), Positives = 145/286 (50%), Gaps = 12/286 (4%)
 Frame = +2

Query: 77  EKYALSGKIMLSAXXXXXXXXXXXXXXHIYARWYXXXXXXXXXXXXXXXXPHIIFXXXXX 256
           E YALSGKIMLSA              H+YARWY                 H++F     
Sbjct: 14  EGYALSGKIMLSAILILFFVIIVMVLLHLYARWYLTRARQRQVRRVRNRRTHLVFYVDSP 73

Query: 257 XXX------ISQGLDASLLKSLPTFIYTSNSHENDALECAVCLSEFEENEKGRLLPKCNH 418
                    +++GL+ ++  SLP F+Y   +H+ D++ECAVCLSEFEENE+GR+LPKCNH
Sbjct: 74  QNPNNVTSHVTRGLEETVKNSLPVFVYPRKTHQ-DSIECAVCLSEFEENERGRVLPKCNH 132

Query: 419 SFHIGCIDMWFNSHSTCPLCRSPVTIPEPENNQQTPIQIVVHSPNTQQPETPSSILXXXX 598
           SFH  CIDMWF+SHSTCPLCRSPV  P  EN        V    N    E  S +     
Sbjct: 133 SFHTECIDMWFHSHSTCPLCRSPVE-PVAENP-------VPEGSNFGISEAGSGLCTSCQ 184

Query: 599 XXXXXXXXXXXXXXXXXXAFELAGVVSIEVPRRNESFKN-LEEGSPLGSQVFKSPGGRIR 775
                                    V+I+VPRRN +F++     SP  S  F+SP  R+ 
Sbjct: 185 HEEDHLGSASTSSFNGGRKPVGLIGVTIDVPRRNGNFEDESNTESPSASHSFRSPMSRML 244

Query: 776 SFKRILSRDRKQPSTP-----MSCCSSAAAIEIDLERGENEEQAQQ 898
           SFKR+LSR+R+   +P     +SC   +   E D+E+G +E   QQ
Sbjct: 245 SFKRMLSRERRGTVSPTVANSVSCGGGSGTTEFDIEQGRDESMPQQ 290