BLASTX nr result

ID: Coptis21_contig00025205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025205
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564750.1| uncharacterized protein [Arabidopsis thaliana] ...   113   3e-23
ref|XP_002520174.1| conserved hypothetical protein [Ricinus comm...   111   1e-22
ref|XP_002888194.1| hypothetical protein ARALYDRAFT_475347 [Arab...   109   4e-22
ref|XP_004135210.1| PREDICTED: uncharacterized protein LOC101206...   108   9e-22
gb|AFK39346.1| unknown [Medicago truncatula]                          107   1e-21

>ref|NP_564750.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8778748|gb|AAF79756.1|AC009317_15 T30E16.22
           [Arabidopsis thaliana] gi|6520233|dbj|BAA87958.1| CW14
           [Arabidopsis thaliana] gi|28393683|gb|AAO42254.1|
           unknown protein [Arabidopsis thaliana]
           gi|28973197|gb|AAO63923.1| unknown protein [Arabidopsis
           thaliana] gi|332195478|gb|AEE33599.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 492

 Score =  113 bits (282), Expect = 3e-23
 Identities = 56/82 (68%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
 Frame = -2

Query: 245 EFHSVRNVSSRTL-LQRPLAGSQFPFSPIEKKVFGSWSHIEPGSFKVRAKNYLRDKKKAL 69
           E H    + S T+ LQRP+AGSQ PF P+EKK+F SWS IEPGSF+VR+K Y RDKKK L
Sbjct: 200 EGHPTGPLFSTTMQLQRPMAGSQVPFCPLEKKMFDSWSIIEPGSFRVRSKTYFRDKKKEL 259

Query: 68  SSNYAAYHPFGVDVFLSQRKVD 3
           + NYAAY+PFGVDVFLSQRKV+
Sbjct: 260 APNYAAYNPFGVDVFLSQRKVN 281


>ref|XP_002520174.1| conserved hypothetical protein [Ricinus communis]
           gi|223540666|gb|EEF42229.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 512

 Score =  111 bits (277), Expect = 1e-22
 Identities = 50/73 (68%), Positives = 61/73 (83%)
 Frame = -2

Query: 221 SSRTLLQRPLAGSQFPFSPIEKKVFGSWSHIEPGSFKVRAKNYLRDKKKALSSNYAAYHP 42
           SS+ +LQRP+AGSQ PF P++KK+   WSHIEPGSFKVR +NYLRDKKK  +  +AAY+P
Sbjct: 225 SSKPILQRPIAGSQVPFCPMDKKMLDCWSHIEPGSFKVRGQNYLRDKKKEFAPAHAAYYP 284

Query: 41  FGVDVFLSQRKVD 3
           FGVDVFLS RK+D
Sbjct: 285 FGVDVFLSPRKID 297


>ref|XP_002888194.1| hypothetical protein ARALYDRAFT_475347 [Arabidopsis lyrata subsp.
           lyrata] gi|297334035|gb|EFH64453.1| hypothetical protein
           ARALYDRAFT_475347 [Arabidopsis lyrata subsp. lyrata]
          Length = 492

 Score =  109 bits (272), Expect = 4e-22
 Identities = 50/73 (68%), Positives = 62/73 (84%)
 Frame = -2

Query: 221 SSRTLLQRPLAGSQFPFSPIEKKVFGSWSHIEPGSFKVRAKNYLRDKKKALSSNYAAYHP 42
           S++  LQRP+AGSQ PF P+EK++F SWS IEPGSF+VR+K Y R+KKK  + NYAAY+P
Sbjct: 209 STKMQLQRPMAGSQVPFCPLEKQMFDSWSIIEPGSFRVRSKTYFREKKKEFAPNYAAYNP 268

Query: 41  FGVDVFLSQRKVD 3
           FGVDVFLSQRKV+
Sbjct: 269 FGVDVFLSQRKVN 281


>ref|XP_004135210.1| PREDICTED: uncharacterized protein LOC101206832 [Cucumis sativus]
           gi|449516445|ref|XP_004165257.1| PREDICTED:
           uncharacterized protein LOC101227289 [Cucumis sativus]
          Length = 536

 Score =  108 bits (269), Expect = 9e-22
 Identities = 50/73 (68%), Positives = 57/73 (78%)
 Frame = -2

Query: 221 SSRTLLQRPLAGSQFPFSPIEKKVFGSWSHIEPGSFKVRAKNYLRDKKKALSSNYAAYHP 42
           SS+ LLQRP+AGSQ PF P EKK+   WSHIEP SFKVR  NY +DKKK  + N+ AY+P
Sbjct: 254 SSKALLQRPIAGSQVPFCPAEKKMLDCWSHIEPDSFKVRGVNYAKDKKKEFAPNHTAYYP 313

Query: 41  FGVDVFLSQRKVD 3
           FGVDVFLS RKVD
Sbjct: 314 FGVDVFLSHRKVD 326


>gb|AFK39346.1| unknown [Medicago truncatula]
          Length = 435

 Score =  107 bits (268), Expect = 1e-21
 Identities = 50/73 (68%), Positives = 61/73 (83%)
 Frame = -2

Query: 221 SSRTLLQRPLAGSQFPFSPIEKKVFGSWSHIEPGSFKVRAKNYLRDKKKALSSNYAAYHP 42
           SS+TL QRP+AGSQ PF PI+KK+   WSHIEPG+FKVR+ NY +D+KK  + NY+AY+P
Sbjct: 208 SSKTL-QRPIAGSQVPFCPIDKKMLDCWSHIEPGTFKVRSVNYFKDRKKEFAPNYSAYYP 266

Query: 41  FGVDVFLSQRKVD 3
           FGVDVFLS RKVD
Sbjct: 267 FGVDVFLSPRKVD 279


Top