BLASTX nr result

ID: Coptis21_contig00025132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025132
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40924.3| unnamed protein product [Vitis vinifera]              125   7e-37
ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855...   125   7e-37
ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu...   115   1e-34
ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-31
ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cuc...   110   3e-29

>emb|CBI40924.3| unnamed protein product [Vitis vinifera]
          Length = 1203

 Score =  125 bits (313), Expect(2) = 7e-37
 Identities = 65/100 (65%), Positives = 76/100 (76%)
 Frame = -2

Query: 302 DLIGSLENANESSVLPMLISVRMVMGLYASERLGPIVFSSDGMKTEMMWDLVRSSWILHV 123
           DL+ SLENA E SVLPML SVR+ +GL+ S +LG +V S  GM  +MMW LVRSSWILHV
Sbjct: 468 DLVESLENAGEGSVLPMLRSVRLALGLFTSRKLGSVVSSCHGMDAQMMWHLVRSSWILHV 527

Query: 122 SCKKRKVAHIAALLSSVLHFSVFCDDRMHETAENTQGPCK 3
           SC KR+VA IAALLS+VLH SVF D+ MH T +N  GP K
Sbjct: 528 SCNKRRVAPIAALLSAVLHSSVFNDEGMHVT-DNGPGPLK 566



 Score = 53.9 bits (128), Expect(2) = 7e-37
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = -1

Query: 447 LAVGTLARSRRAILMNWKWLCLNSLLSILCWMMENEVH 334
           L  G LAR+RRAILMNWKW CL SLLSI  + ++N VH
Sbjct: 412 LGFGALARTRRAILMNWKWHCLESLLSIPYYALKNGVH 449


>ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855390 [Vitis vinifera]
          Length = 920

 Score =  125 bits (313), Expect(2) = 7e-37
 Identities = 65/100 (65%), Positives = 76/100 (76%)
 Frame = -2

Query: 302 DLIGSLENANESSVLPMLISVRMVMGLYASERLGPIVFSSDGMKTEMMWDLVRSSWILHV 123
           DL+ SLENA E SVLPML SVR+ +GL+ S +LG +V S  GM  +MMW LVRSSWILHV
Sbjct: 338 DLVESLENAGEGSVLPMLRSVRLALGLFTSRKLGSVVSSCHGMDAQMMWHLVRSSWILHV 397

Query: 122 SCKKRKVAHIAALLSSVLHFSVFCDDRMHETAENTQGPCK 3
           SC KR+VA IAALLS+VLH SVF D+ MH T +N  GP K
Sbjct: 398 SCNKRRVAPIAALLSAVLHSSVFNDEGMHVT-DNGPGPLK 436



 Score = 53.9 bits (128), Expect(2) = 7e-37
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = -1

Query: 447 LAVGTLARSRRAILMNWKWLCLNSLLSILCWMMENEVH 334
           L  G LAR+RRAILMNWKW CL SLLSI  + ++N VH
Sbjct: 282 LGFGALARTRRAILMNWKWHCLESLLSIPYYALKNGVH 319


>ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
            gi|223536320|gb|EEF37970.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1744

 Score =  115 bits (287), Expect(2) = 1e-34
 Identities = 62/100 (62%), Positives = 72/100 (72%)
 Frame = -2

Query: 302  DLIGSLENANESSVLPMLISVRMVMGLYASERLGPIVFSSDGMKTEMMWDLVRSSWILHV 123
            DL+ SLENA E SVLPML S+R+  GL AS   G +V S +G+  +MMW LVRSSW+LHV
Sbjct: 1012 DLVESLENAGEGSVLPMLRSIRLTFGLLASGNSGSLVSSCNGVDAQMMWHLVRSSWMLHV 1071

Query: 122  SCKKRKVAHIAALLSSVLHFSVFCDDRMHETAENTQGPCK 3
            S  KR+VA IAALLSSVLH SVF D+ MH T  N  GP K
Sbjct: 1072 SNNKRRVAAIAALLSSVLHASVFADEAMH-TNNNGPGPLK 1110



 Score = 56.2 bits (134), Expect(2) = 1e-34
 Identities = 26/38 (68%), Positives = 29/38 (76%)
 Frame = -1

Query: 447  LAVGTLARSRRAILMNWKWLCLNSLLSILCWMMENEVH 334
            LAVG L RSRRA+L+NWKWLCL SLLSI  +  EN  H
Sbjct: 956  LAVGVLVRSRRAVLLNWKWLCLESLLSIPHYAFENGPH 993


>ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|222833998|gb|EEE72475.1|
           predicted protein [Populus trichocarpa]
          Length = 1224

 Score =  113 bits (283), Expect(2) = 2e-31
 Identities = 61/100 (61%), Positives = 72/100 (72%)
 Frame = -2

Query: 302 DLIGSLENANESSVLPMLISVRMVMGLYASERLGPIVFSSDGMKTEMMWDLVRSSWILHV 123
           DL+ SL+NA E SVLPML SVR+ +GL AS +L   V S +G+  +MMW LV SSWILHV
Sbjct: 496 DLVESLDNAGEGSVLPMLRSVRLALGLIASGKLDSHVSSCNGVDAQMMWRLVNSSWILHV 555

Query: 122 SCKKRKVAHIAALLSSVLHFSVFCDDRMHETAENTQGPCK 3
           +C KR+VA IAALLSSVLH SVF D+ MH    N  GP K
Sbjct: 556 NCNKRRVASIAALLSSVLHRSVFTDEGMH-LINNRPGPLK 594



 Score = 47.0 bits (110), Expect(2) = 2e-31
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = -1

Query: 447 LAVGTLARSRRAILMNWKWLCLNSLLSI 364
           LAVG LAR+RRA+L+N KW+CL SLLSI
Sbjct: 440 LAVGVLARTRRAVLLNQKWICLESLLSI 467


>ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cucumis sativus]
          Length = 1833

 Score =  110 bits (274), Expect(2) = 3e-29
 Identities = 58/100 (58%), Positives = 71/100 (71%)
 Frame = -2

Query: 302  DLIGSLENANESSVLPMLISVRMVMGLYASERLGPIVFSSDGMKTEMMWDLVRSSWILHV 123
            DL+ SLENA ESSVLPML  VR+++ L+     G +V S +G+ +EMMW LV SSWILHV
Sbjct: 1097 DLVESLENAGESSVLPMLRLVRLILCLFYKGNSGLLVTSCNGVNSEMMWRLVHSSWILHV 1156

Query: 122  SCKKRKVAHIAALLSSVLHFSVFCDDRMHETAENTQGPCK 3
            SC KR+VAHIA LLSSVLH S F +  MH  ++   GP K
Sbjct: 1157 SCNKRRVAHIAVLLSSVLHSSAFSEINMH-LSDGGPGPLK 1195



 Score = 43.5 bits (101), Expect(2) = 3e-29
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = -1

Query: 447  LAVGTLARSRRAILMNWKWLCLNSLLSILCWMMENEV 337
            L  G L R+RRA+L+ WKW CL SLLSI    ++N +
Sbjct: 1041 LDAGVLVRTRRAVLLKWKWHCLESLLSIPYCALQNGI 1077


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