BLASTX nr result
ID: Coptis21_contig00025132
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00025132 (447 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI40924.3| unnamed protein product [Vitis vinifera] 125 7e-37 ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855... 125 7e-37 ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu... 115 1e-34 ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|2... 113 2e-31 ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cuc... 110 3e-29 >emb|CBI40924.3| unnamed protein product [Vitis vinifera] Length = 1203 Score = 125 bits (313), Expect(2) = 7e-37 Identities = 65/100 (65%), Positives = 76/100 (76%) Frame = -2 Query: 302 DLIGSLENANESSVLPMLISVRMVMGLYASERLGPIVFSSDGMKTEMMWDLVRSSWILHV 123 DL+ SLENA E SVLPML SVR+ +GL+ S +LG +V S GM +MMW LVRSSWILHV Sbjct: 468 DLVESLENAGEGSVLPMLRSVRLALGLFTSRKLGSVVSSCHGMDAQMMWHLVRSSWILHV 527 Query: 122 SCKKRKVAHIAALLSSVLHFSVFCDDRMHETAENTQGPCK 3 SC KR+VA IAALLS+VLH SVF D+ MH T +N GP K Sbjct: 528 SCNKRRVAPIAALLSAVLHSSVFNDEGMHVT-DNGPGPLK 566 Score = 53.9 bits (128), Expect(2) = 7e-37 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -1 Query: 447 LAVGTLARSRRAILMNWKWLCLNSLLSILCWMMENEVH 334 L G LAR+RRAILMNWKW CL SLLSI + ++N VH Sbjct: 412 LGFGALARTRRAILMNWKWHCLESLLSIPYYALKNGVH 449 >ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855390 [Vitis vinifera] Length = 920 Score = 125 bits (313), Expect(2) = 7e-37 Identities = 65/100 (65%), Positives = 76/100 (76%) Frame = -2 Query: 302 DLIGSLENANESSVLPMLISVRMVMGLYASERLGPIVFSSDGMKTEMMWDLVRSSWILHV 123 DL+ SLENA E SVLPML SVR+ +GL+ S +LG +V S GM +MMW LVRSSWILHV Sbjct: 338 DLVESLENAGEGSVLPMLRSVRLALGLFTSRKLGSVVSSCHGMDAQMMWHLVRSSWILHV 397 Query: 122 SCKKRKVAHIAALLSSVLHFSVFCDDRMHETAENTQGPCK 3 SC KR+VA IAALLS+VLH SVF D+ MH T +N GP K Sbjct: 398 SCNKRRVAPIAALLSAVLHSSVFNDEGMHVT-DNGPGPLK 436 Score = 53.9 bits (128), Expect(2) = 7e-37 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = -1 Query: 447 LAVGTLARSRRAILMNWKWLCLNSLLSILCWMMENEVH 334 L G LAR+RRAILMNWKW CL SLLSI + ++N VH Sbjct: 282 LGFGALARTRRAILMNWKWHCLESLLSIPYYALKNGVH 319 >ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis] gi|223536320|gb|EEF37970.1| RNA binding protein, putative [Ricinus communis] Length = 1744 Score = 115 bits (287), Expect(2) = 1e-34 Identities = 62/100 (62%), Positives = 72/100 (72%) Frame = -2 Query: 302 DLIGSLENANESSVLPMLISVRMVMGLYASERLGPIVFSSDGMKTEMMWDLVRSSWILHV 123 DL+ SLENA E SVLPML S+R+ GL AS G +V S +G+ +MMW LVRSSW+LHV Sbjct: 1012 DLVESLENAGEGSVLPMLRSIRLTFGLLASGNSGSLVSSCNGVDAQMMWHLVRSSWMLHV 1071 Query: 122 SCKKRKVAHIAALLSSVLHFSVFCDDRMHETAENTQGPCK 3 S KR+VA IAALLSSVLH SVF D+ MH T N GP K Sbjct: 1072 SNNKRRVAAIAALLSSVLHASVFADEAMH-TNNNGPGPLK 1110 Score = 56.2 bits (134), Expect(2) = 1e-34 Identities = 26/38 (68%), Positives = 29/38 (76%) Frame = -1 Query: 447 LAVGTLARSRRAILMNWKWLCLNSLLSILCWMMENEVH 334 LAVG L RSRRA+L+NWKWLCL SLLSI + EN H Sbjct: 956 LAVGVLVRSRRAVLLNWKWLCLESLLSIPHYAFENGPH 993 >ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|222833998|gb|EEE72475.1| predicted protein [Populus trichocarpa] Length = 1224 Score = 113 bits (283), Expect(2) = 2e-31 Identities = 61/100 (61%), Positives = 72/100 (72%) Frame = -2 Query: 302 DLIGSLENANESSVLPMLISVRMVMGLYASERLGPIVFSSDGMKTEMMWDLVRSSWILHV 123 DL+ SL+NA E SVLPML SVR+ +GL AS +L V S +G+ +MMW LV SSWILHV Sbjct: 496 DLVESLDNAGEGSVLPMLRSVRLALGLIASGKLDSHVSSCNGVDAQMMWRLVNSSWILHV 555 Query: 122 SCKKRKVAHIAALLSSVLHFSVFCDDRMHETAENTQGPCK 3 +C KR+VA IAALLSSVLH SVF D+ MH N GP K Sbjct: 556 NCNKRRVASIAALLSSVLHRSVFTDEGMH-LINNRPGPLK 594 Score = 47.0 bits (110), Expect(2) = 2e-31 Identities = 21/28 (75%), Positives = 25/28 (89%) Frame = -1 Query: 447 LAVGTLARSRRAILMNWKWLCLNSLLSI 364 LAVG LAR+RRA+L+N KW+CL SLLSI Sbjct: 440 LAVGVLARTRRAVLLNQKWICLESLLSI 467 >ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cucumis sativus] Length = 1833 Score = 110 bits (274), Expect(2) = 3e-29 Identities = 58/100 (58%), Positives = 71/100 (71%) Frame = -2 Query: 302 DLIGSLENANESSVLPMLISVRMVMGLYASERLGPIVFSSDGMKTEMMWDLVRSSWILHV 123 DL+ SLENA ESSVLPML VR+++ L+ G +V S +G+ +EMMW LV SSWILHV Sbjct: 1097 DLVESLENAGESSVLPMLRLVRLILCLFYKGNSGLLVTSCNGVNSEMMWRLVHSSWILHV 1156 Query: 122 SCKKRKVAHIAALLSSVLHFSVFCDDRMHETAENTQGPCK 3 SC KR+VAHIA LLSSVLH S F + MH ++ GP K Sbjct: 1157 SCNKRRVAHIAVLLSSVLHSSAFSEINMH-LSDGGPGPLK 1195 Score = 43.5 bits (101), Expect(2) = 3e-29 Identities = 19/37 (51%), Positives = 25/37 (67%) Frame = -1 Query: 447 LAVGTLARSRRAILMNWKWLCLNSLLSILCWMMENEV 337 L G L R+RRA+L+ WKW CL SLLSI ++N + Sbjct: 1041 LDAGVLVRTRRAVLLKWKWHCLESLLSIPYCALQNGI 1077