BLASTX nr result

ID: Coptis21_contig00025084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00025084
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278259.2| PREDICTED: uncharacterized protein LOC100245...   154   7e-36
emb|CBI14979.3| unnamed protein product [Vitis vinifera]              154   7e-36
ref|XP_002302756.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_002511350.1| nucleic acid binding protein, putative [Rici...   149   2e-34
ref|NP_001190909.1| D111/G-patch domain-containing protein [Arab...   134   1e-29

>ref|XP_002278259.2| PREDICTED: uncharacterized protein LOC100245077 [Vitis vinifera]
          Length = 421

 Score =  154 bits (389), Expect = 7e-36
 Identities = 75/102 (73%), Positives = 85/102 (83%)
 Frame = -1

Query: 341 KNKGVAYRDRAAERRALHGGIGVGPGQKHSRVDGGKETSPVSHSTEEAAAEALQMSFGAG 162
           K+K   YRDRAAERR LHGG GVGPGQK+  V     +SPVS STEEAAAEAL MSFGAG
Sbjct: 312 KHKSHVYRDRAAERRTLHGGFGVGPGQKNLVVGDAMPSSPVSVSTEEAAAEALNMSFGAG 371

Query: 161 SFARRVLENMGWKEGEALGKTTKGLLQPLQAVGNKGSAGLGW 36
           S+ARR+LE+MGWKEGEALG T KGLL+PL+AV N+G+AGLGW
Sbjct: 372 SYARRILESMGWKEGEALGNTAKGLLEPLEAVANRGNAGLGW 413


>emb|CBI14979.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score =  154 bits (389), Expect = 7e-36
 Identities = 75/102 (73%), Positives = 85/102 (83%)
 Frame = -1

Query: 341 KNKGVAYRDRAAERRALHGGIGVGPGQKHSRVDGGKETSPVSHSTEEAAAEALQMSFGAG 162
           K+K   YRDRAAERR LHGG GVGPGQK+  V     +SPVS STEEAAAEAL MSFGAG
Sbjct: 374 KHKSHVYRDRAAERRTLHGGFGVGPGQKNLVVGDAMPSSPVSVSTEEAAAEALNMSFGAG 433

Query: 161 SFARRVLENMGWKEGEALGKTTKGLLQPLQAVGNKGSAGLGW 36
           S+ARR+LE+MGWKEGEALG T KGLL+PL+AV N+G+AGLGW
Sbjct: 434 SYARRILESMGWKEGEALGNTAKGLLEPLEAVANRGNAGLGW 475


>ref|XP_002302756.1| predicted protein [Populus trichocarpa] gi|222844482|gb|EEE82029.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  153 bits (386), Expect = 2e-35
 Identities = 76/99 (76%), Positives = 85/99 (85%), Gaps = 1/99 (1%)
 Frame = -1

Query: 326 AYRDRAAERRALHGGIGVGPGQKHSRV-DGGKETSPVSHSTEEAAAEALQMSFGAGSFAR 150
           AYRDRAAERR LHGG GVGPGQK S   D G  +S VS STEEAAAEAL MSFGAGS+AR
Sbjct: 369 AYRDRAAERRNLHGGFGVGPGQKSSLFGDVGGSSSAVSTSTEEAAAEALSMSFGAGSYAR 428

Query: 149 RVLENMGWKEGEALGKTTKGLLQPLQAVGNKGSAGLGWP 33
           ++LENMGWKEGEALG TTKGL++P++AVGN G+AGLGWP
Sbjct: 429 KILENMGWKEGEALGNTTKGLVEPIKAVGNMGNAGLGWP 467


>ref|XP_002511350.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223550465|gb|EEF51952.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 417

 Score =  149 bits (376), Expect = 2e-34
 Identities = 74/102 (72%), Positives = 83/102 (81%)
 Frame = -1

Query: 341 KNKGVAYRDRAAERRALHGGIGVGPGQKHSRVDGGKETSPVSHSTEEAAAEALQMSFGAG 162
           K +   YRDRAAERR LHG  GVGPG+K S V+    TSPVS STEEAAA+AL MS GAG
Sbjct: 309 KQRIYEYRDRAAERRTLHGSFGVGPGEKSSLVEDVFGTSPVSTSTEEAAAKALNMSLGAG 368

Query: 161 SFARRVLENMGWKEGEALGKTTKGLLQPLQAVGNKGSAGLGW 36
           S+AR++LENMGWKEGEALGKT KGL+ P+QAVGN GSAGLGW
Sbjct: 369 SYARKILENMGWKEGEALGKTRKGLIIPIQAVGNMGSAGLGW 410


>ref|NP_001190909.1| D111/G-patch domain-containing protein [Arabidopsis thaliana]
           gi|332660932|gb|AEE86332.1| D111/G-patch
           domain-containing protein [Arabidopsis thaliana]
          Length = 530

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/106 (59%), Positives = 83/106 (78%), Gaps = 2/106 (1%)
 Frame = -1

Query: 344 LKNKGVAYRDRAAERRALHGGIGVGPGQKHSRVDGGKE--TSPVSHSTEEAAAEALQMSF 171
           ++ +  +YRDRAAERR LHGG GVGPGQK + VD   +  + P + S E+  AEAL++SF
Sbjct: 420 IEERSCSYRDRAAERRNLHGGYGVGPGQKGTTVDHNTDEHSVPDTGSEEDTVAEALELSF 479

Query: 170 GAGSFARRVLENMGWKEGEALGKTTKGLLQPLQAVGNKGSAGLGWP 33
           G+GS+ARR++ NMGWKEGE LGK TKGL++P+QAVGN G+ GLG+P
Sbjct: 480 GSGSYARRIMGNMGWKEGETLGKNTKGLVEPIQAVGNTGNVGLGFP 525


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