BLASTX nr result

ID: Coptis21_contig00024500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024500
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_177172.6| zinc ion binding protein [Arabidopsis thaliana]...   163   2e-38
ref|XP_002887282.1| predicted protein [Arabidopsis lyrata subsp....   162   3e-38
ref|XP_004135470.1| PREDICTED: zinc finger MYND domain-containin...   155   3e-36
emb|CBI32077.3| unnamed protein product [Vitis vinifera]              154   5e-36
ref|XP_002267535.1| PREDICTED: zinc finger MYND domain-containin...   151   5e-35

>ref|NP_177172.6| zinc ion binding protein [Arabidopsis thaliana]
           gi|332196904|gb|AEE35025.1| zinc ion binding protein
           [Arabidopsis thaliana]
          Length = 374

 Score =  163 bits (412), Expect = 2e-38
 Identities = 71/112 (63%), Positives = 86/112 (76%)
 Frame = -3

Query: 337 CGQCGAVAYCSTSHQVSHWSEHKEECERLEQQMRRVDVLHDFPFTFSKEATVQICEKRRS 158
           CGQCGAVAYCS SHQ+SHWS HKEECERLE+QMRRVD+L+DFPFTF++EAT+Q+ +K  +
Sbjct: 20  CGQCGAVAYCSVSHQISHWSYHKEECERLEEQMRRVDLLNDFPFTFTEEATIQVSQKHET 79

Query: 157 RCSFLMDRSLHKVGMWKYECNCXXXXXXXXSRVDDEWSLPSDSCPCCEPVIP 2
           RCSF + R LH+VGMW YECNC        +   + W LPS SCPC  P+ P
Sbjct: 80  RCSFFIKRGLHRVGMWMYECNCGALAFDSFN--IEGWHLPSSSCPCRGPLSP 129


>ref|XP_002887282.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333123|gb|EFH63541.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 392

 Score =  162 bits (410), Expect = 3e-38
 Identities = 72/114 (63%), Positives = 85/114 (74%), Gaps = 2/114 (1%)
 Frame = -3

Query: 337 CGQCGAVAYCSTSHQVSHWSEHKEECERLEQQMRRVDVLHDFPFTFSKEATVQICEKRRS 158
           CGQCG+VAYCS SHQ SHWS HKEECERLE+QMRRVD+L+DFPFTF++EAT+Q+ +K  +
Sbjct: 20  CGQCGSVAYCSVSHQSSHWSYHKEECERLEEQMRRVDLLNDFPFTFTEEATIQVSQKHET 79

Query: 157 RCSFLMDRSLHKVGMWKYECNCXXXXXXXXSRV--DDEWSLPSDSCPCCEPVIP 2
           RCSFL  R LH+VGMW YECNC             +D W LPS SCPC  P+ P
Sbjct: 80  RCSFLCKRELHRVGMWMYECNCGASARFSAFDSFNNDGWHLPSSSCPCRGPLSP 133


>ref|XP_004135470.1| PREDICTED: zinc finger MYND domain-containing protein 15-like
           [Cucumis sativus] gi|449478708|ref|XP_004155398.1|
           PREDICTED: zinc finger MYND domain-containing protein
           15-like [Cucumis sativus]
          Length = 376

 Score =  155 bits (392), Expect = 3e-36
 Identities = 66/113 (58%), Positives = 84/113 (74%), Gaps = 1/113 (0%)
 Frame = -3

Query: 337 CGQCGAVAYCSTSHQVSHWSEHKEECERLEQQMRRVDVLHDFPFTFSKEATVQICEKRRS 158
           CG+CG VAYCS  HQV HW++HK+EC+R E QM R+D L++FPFTFS+EATVQ+C+K+ S
Sbjct: 20  CGRCGVVAYCSVDHQVKHWNDHKDECKRFELQMERIDALNEFPFTFSEEATVQLCQKQES 79

Query: 157 RCSFLMDRSLHKVGMWKYECNC-XXXXXXXXSRVDDEWSLPSDSCPCCEPVIP 2
           RCSFL  R++HK+GMW YEC C         SR++D W LP   CPC EP+ P
Sbjct: 80  RCSFLSKRAIHKIGMWFYECPCGEAATSYNFSRLNDGWVLPRFHCPCSEPLSP 132


>emb|CBI32077.3| unnamed protein product [Vitis vinifera]
          Length = 376

 Score =  154 bits (390), Expect = 5e-36
 Identities = 72/111 (64%), Positives = 84/111 (75%), Gaps = 1/111 (0%)
 Frame = -3

Query: 337 CGQCGAVAYCSTSHQVSHWSEHKEECERLEQQMRRVDVLHDFPFTFSKEATVQICEKRRS 158
           CG+CGAVAYCS SHQVSHWS+HKEEC RLEQQM+ VDVL+DFPFTF+ EAT++I EK+ S
Sbjct: 20  CGRCGAVAYCSVSHQVSHWSDHKEECGRLEQQMKLVDVLNDFPFTFTPEATIRIVEKQES 79

Query: 157 RCSFLMDRSLHKVGMWKYECNC-XXXXXXXXSRVDDEWSLPSDSCPCCEPV 8
           RCSFL +R LH+VGMW  EC C         SR+ D W+L S  CPC  PV
Sbjct: 80  RCSFLSNRGLHRVGMWMCECPCGDSLVSLEHSRLSDCWNLSSTLCPCSGPV 130


>ref|XP_002267535.1| PREDICTED: zinc finger MYND domain-containing protein 15-like
           [Vitis vinifera]
          Length = 369

 Score =  151 bits (382), Expect = 5e-35
 Identities = 70/110 (63%), Positives = 81/110 (73%)
 Frame = -3

Query: 337 CGQCGAVAYCSTSHQVSHWSEHKEECERLEQQMRRVDVLHDFPFTFSKEATVQICEKRRS 158
           CG+CGAVAYCS SHQVSHWS+HKEEC RLEQQM+ VDVL+DFPFTF+ EAT++I EK+ S
Sbjct: 20  CGRCGAVAYCSVSHQVSHWSDHKEECGRLEQQMKLVDVLNDFPFTFTPEATIRIVEKQES 79

Query: 157 RCSFLMDRSLHKVGMWKYECNCXXXXXXXXSRVDDEWSLPSDSCPCCEPV 8
           RCSFL +R LH+VGMW  EC C            D W+L S  CPC  PV
Sbjct: 80  RCSFLSNRGLHRVGMWMCECPCGDSLNI------DCWNLSSTLCPCSGPV 123


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