BLASTX nr result
ID: Coptis21_contig00024500
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00024500 (339 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_177172.6| zinc ion binding protein [Arabidopsis thaliana]... 163 2e-38 ref|XP_002887282.1| predicted protein [Arabidopsis lyrata subsp.... 162 3e-38 ref|XP_004135470.1| PREDICTED: zinc finger MYND domain-containin... 155 3e-36 emb|CBI32077.3| unnamed protein product [Vitis vinifera] 154 5e-36 ref|XP_002267535.1| PREDICTED: zinc finger MYND domain-containin... 151 5e-35 >ref|NP_177172.6| zinc ion binding protein [Arabidopsis thaliana] gi|332196904|gb|AEE35025.1| zinc ion binding protein [Arabidopsis thaliana] Length = 374 Score = 163 bits (412), Expect = 2e-38 Identities = 71/112 (63%), Positives = 86/112 (76%) Frame = -3 Query: 337 CGQCGAVAYCSTSHQVSHWSEHKEECERLEQQMRRVDVLHDFPFTFSKEATVQICEKRRS 158 CGQCGAVAYCS SHQ+SHWS HKEECERLE+QMRRVD+L+DFPFTF++EAT+Q+ +K + Sbjct: 20 CGQCGAVAYCSVSHQISHWSYHKEECERLEEQMRRVDLLNDFPFTFTEEATIQVSQKHET 79 Query: 157 RCSFLMDRSLHKVGMWKYECNCXXXXXXXXSRVDDEWSLPSDSCPCCEPVIP 2 RCSF + R LH+VGMW YECNC + + W LPS SCPC P+ P Sbjct: 80 RCSFFIKRGLHRVGMWMYECNCGALAFDSFN--IEGWHLPSSSCPCRGPLSP 129 >ref|XP_002887282.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297333123|gb|EFH63541.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 392 Score = 162 bits (410), Expect = 3e-38 Identities = 72/114 (63%), Positives = 85/114 (74%), Gaps = 2/114 (1%) Frame = -3 Query: 337 CGQCGAVAYCSTSHQVSHWSEHKEECERLEQQMRRVDVLHDFPFTFSKEATVQICEKRRS 158 CGQCG+VAYCS SHQ SHWS HKEECERLE+QMRRVD+L+DFPFTF++EAT+Q+ +K + Sbjct: 20 CGQCGSVAYCSVSHQSSHWSYHKEECERLEEQMRRVDLLNDFPFTFTEEATIQVSQKHET 79 Query: 157 RCSFLMDRSLHKVGMWKYECNCXXXXXXXXSRV--DDEWSLPSDSCPCCEPVIP 2 RCSFL R LH+VGMW YECNC +D W LPS SCPC P+ P Sbjct: 80 RCSFLCKRELHRVGMWMYECNCGASARFSAFDSFNNDGWHLPSSSCPCRGPLSP 133 >ref|XP_004135470.1| PREDICTED: zinc finger MYND domain-containing protein 15-like [Cucumis sativus] gi|449478708|ref|XP_004155398.1| PREDICTED: zinc finger MYND domain-containing protein 15-like [Cucumis sativus] Length = 376 Score = 155 bits (392), Expect = 3e-36 Identities = 66/113 (58%), Positives = 84/113 (74%), Gaps = 1/113 (0%) Frame = -3 Query: 337 CGQCGAVAYCSTSHQVSHWSEHKEECERLEQQMRRVDVLHDFPFTFSKEATVQICEKRRS 158 CG+CG VAYCS HQV HW++HK+EC+R E QM R+D L++FPFTFS+EATVQ+C+K+ S Sbjct: 20 CGRCGVVAYCSVDHQVKHWNDHKDECKRFELQMERIDALNEFPFTFSEEATVQLCQKQES 79 Query: 157 RCSFLMDRSLHKVGMWKYECNC-XXXXXXXXSRVDDEWSLPSDSCPCCEPVIP 2 RCSFL R++HK+GMW YEC C SR++D W LP CPC EP+ P Sbjct: 80 RCSFLSKRAIHKIGMWFYECPCGEAATSYNFSRLNDGWVLPRFHCPCSEPLSP 132 >emb|CBI32077.3| unnamed protein product [Vitis vinifera] Length = 376 Score = 154 bits (390), Expect = 5e-36 Identities = 72/111 (64%), Positives = 84/111 (75%), Gaps = 1/111 (0%) Frame = -3 Query: 337 CGQCGAVAYCSTSHQVSHWSEHKEECERLEQQMRRVDVLHDFPFTFSKEATVQICEKRRS 158 CG+CGAVAYCS SHQVSHWS+HKEEC RLEQQM+ VDVL+DFPFTF+ EAT++I EK+ S Sbjct: 20 CGRCGAVAYCSVSHQVSHWSDHKEECGRLEQQMKLVDVLNDFPFTFTPEATIRIVEKQES 79 Query: 157 RCSFLMDRSLHKVGMWKYECNC-XXXXXXXXSRVDDEWSLPSDSCPCCEPV 8 RCSFL +R LH+VGMW EC C SR+ D W+L S CPC PV Sbjct: 80 RCSFLSNRGLHRVGMWMCECPCGDSLVSLEHSRLSDCWNLSSTLCPCSGPV 130 >ref|XP_002267535.1| PREDICTED: zinc finger MYND domain-containing protein 15-like [Vitis vinifera] Length = 369 Score = 151 bits (382), Expect = 5e-35 Identities = 70/110 (63%), Positives = 81/110 (73%) Frame = -3 Query: 337 CGQCGAVAYCSTSHQVSHWSEHKEECERLEQQMRRVDVLHDFPFTFSKEATVQICEKRRS 158 CG+CGAVAYCS SHQVSHWS+HKEEC RLEQQM+ VDVL+DFPFTF+ EAT++I EK+ S Sbjct: 20 CGRCGAVAYCSVSHQVSHWSDHKEECGRLEQQMKLVDVLNDFPFTFTPEATIRIVEKQES 79 Query: 157 RCSFLMDRSLHKVGMWKYECNCXXXXXXXXSRVDDEWSLPSDSCPCCEPV 8 RCSFL +R LH+VGMW EC C D W+L S CPC PV Sbjct: 80 RCSFLSNRGLHRVGMWMCECPCGDSLNI------DCWNLSSTLCPCSGPV 123