BLASTX nr result

ID: Coptis21_contig00024492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024492
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   218   5e-55
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   212   2e-53
emb|CBI26829.3| unnamed protein product [Vitis vinifera]              212   2e-53
ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|2...   212   2e-53
ref|NP_001063107.1| Os09g0397900 [Oryza sativa Japonica Group] g...   207   6e-52

>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
           communis] gi|223534732|gb|EEF36424.1| cleavage and
           polyadenylation specificity factor, putative [Ricinus
           communis]
          Length = 963

 Score =  218 bits (554), Expect = 5e-55
 Identities = 107/125 (85%), Positives = 117/125 (93%)
 Frame = -3

Query: 376 AMFYAKVKDSALVYTGDYNMTPDRHLGAASIDKFLHLDLVISESTYATTVRESKYARERE 197
           AMFYAKV DSA+VYTGDYNMTPDRHLGAA ID+ L LDL+I+ESTYATT+R+SKYARERE
Sbjct: 161 AMFYAKVGDSAMVYTGDYNMTPDRHLGAAQIDR-LQLDLLITESTYATTIRDSKYARERE 219

Query: 196 FLKVVHQCVGNGGKVLIPTFALGRAQELCILLDDYWERMNLNNIPIYFSAGLTLQANMYY 17
           FLKVVH+CV  GGKVLIPTFALGRAQELC+LLDDYWERMNL  +PIYFSAGLT+QANMYY
Sbjct: 220 FLKVVHKCVAGGGKVLIPTFALGRAQELCLLLDDYWERMNL-KVPIYFSAGLTIQANMYY 278

Query: 16  KMLIG 2
           KMLIG
Sbjct: 279 KMLIG 283


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  212 bits (540), Expect = 2e-53
 Identities = 105/124 (84%), Positives = 116/124 (93%)
 Frame = -3

Query: 376  AMFYAKVKDSALVYTGDYNMTPDRHLGAASIDKFLHLDLVISESTYATTVRESKYARERE 197
            AMFYAKV D+A+VYTGDYNMTPDRHLGAA ID+ L LDL+I+ESTYATTVR+SKYARERE
Sbjct: 1410 AMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDR-LQLDLLITESTYATTVRDSKYARERE 1468

Query: 196  FLKVVHQCVGNGGKVLIPTFALGRAQELCILLDDYWERMNLNNIPIYFSAGLTLQANMYY 17
            FLK VH+CV +GGKVLIPTFALGRAQELCILLD+YWERMNL  +PIYFSAGLT+QANMYY
Sbjct: 1469 FLKAVHKCVADGGKVLIPTFALGRAQELCILLDNYWERMNL-KVPIYFSAGLTIQANMYY 1527

Query: 16   KMLI 5
            KMLI
Sbjct: 1528 KMLI 1531


>emb|CBI26829.3| unnamed protein product [Vitis vinifera]
          Length = 686

 Score =  212 bits (540), Expect = 2e-53
 Identities = 105/124 (84%), Positives = 116/124 (93%)
 Frame = -3

Query: 376 AMFYAKVKDSALVYTGDYNMTPDRHLGAASIDKFLHLDLVISESTYATTVRESKYARERE 197
           AMFYAKV D+A+VYTGDYNMTPDRHLGAA ID+ L LDL+I+ESTYATTVR+SKYARERE
Sbjct: 216 AMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDR-LQLDLLITESTYATTVRDSKYARERE 274

Query: 196 FLKVVHQCVGNGGKVLIPTFALGRAQELCILLDDYWERMNLNNIPIYFSAGLTLQANMYY 17
           FLK VH+CV +GGKVLIPTFALGRAQELCILLD+YWERMNL  +PIYFSAGLT+QANMYY
Sbjct: 275 FLKAVHKCVADGGKVLIPTFALGRAQELCILLDNYWERMNL-KVPIYFSAGLTIQANMYY 333

Query: 16  KMLI 5
           KMLI
Sbjct: 334 KMLI 337


>ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|222863821|gb|EEF00952.1|
           predicted protein [Populus trichocarpa]
          Length = 639

 Score =  212 bits (540), Expect = 2e-53
 Identities = 104/124 (83%), Positives = 115/124 (92%)
 Frame = -3

Query: 376 AMFYAKVKDSALVYTGDYNMTPDRHLGAASIDKFLHLDLVISESTYATTVRESKYARERE 197
           AMFYAKV DSA+VYTGDYNMTPDRHLGAA ID+ L LDL+I+ESTYATT+R+SKYARERE
Sbjct: 161 AMFYAKVGDSAMVYTGDYNMTPDRHLGAAQIDR-LELDLLITESTYATTIRDSKYARERE 219

Query: 196 FLKVVHQCVGNGGKVLIPTFALGRAQELCILLDDYWERMNLNNIPIYFSAGLTLQANMYY 17
           FLK VH+CV  GGKVLIPTFALGRAQELCILLDDYWERMNL  +PIYFSAGLT+QAN+YY
Sbjct: 220 FLKAVHECVAGGGKVLIPTFALGRAQELCILLDDYWERMNL-KVPIYFSAGLTIQANLYY 278

Query: 16  KMLI 5
           K+LI
Sbjct: 279 KILI 282


>ref|NP_001063107.1| Os09g0397900 [Oryza sativa Japonica Group]
           gi|50252615|dbj|BAD28786.1| putative FEG protein [Oryza
           sativa Japonica Group] gi|113631340|dbj|BAF25021.1|
           Os09g0397900 [Oryza sativa Japonica Group]
           gi|218202115|gb|EEC84542.1| hypothetical protein
           OsI_31281 [Oryza sativa Indica Group]
           gi|222641522|gb|EEE69654.1| hypothetical protein
           OsJ_29268 [Oryza sativa Japonica Group]
          Length = 559

 Score =  207 bits (528), Expect = 6e-52
 Identities = 104/125 (83%), Positives = 113/125 (90%)
 Frame = -3

Query: 376 AMFYAKVKDSALVYTGDYNMTPDRHLGAASIDKFLHLDLVISESTYATTVRESKYARERE 197
           AM YAKV D+A+VYTGDYNMTPDRHLGAA ID+ L LDL+I+ESTYA TVR+SK+ARERE
Sbjct: 164 AMIYAKVGDAAIVYTGDYNMTPDRHLGAAQIDR-LKLDLLITESTYAKTVRDSKHARERE 222

Query: 196 FLKVVHQCVGNGGKVLIPTFALGRAQELCILLDDYWERMNLNNIPIYFSAGLTLQANMYY 17
           FLK VH+CV  GGKVLIP FALGRAQELCILLDDYWERMNL  IPIYFSAGLT+QANMYY
Sbjct: 223 FLKAVHKCVSGGGKVLIPAFALGRAQELCILLDDYWERMNL-KIPIYFSAGLTIQANMYY 281

Query: 16  KMLIG 2
           KMLIG
Sbjct: 282 KMLIG 286


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