BLASTX nr result
ID: Coptis21_contig00024483
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00024483 (996 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI20809.3| unnamed protein product [Vitis vinifera] 439 e-121 ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v... 437 e-120 ref|XP_003545557.1| PREDICTED: DNA topoisomerase 1-like [Glycine... 424 e-116 ref|XP_003551158.1| PREDICTED: DNA topoisomerase 1-like [Glycine... 419 e-115 ref|NP_194849.3| DNA topoisomerase, type IA, core [Arabidopsis t... 414 e-113 >emb|CBI20809.3| unnamed protein product [Vitis vinifera] Length = 1035 Score = 439 bits (1130), Expect = e-121 Identities = 212/295 (71%), Positives = 247/295 (83%) Frame = -2 Query: 995 LKDRNYVTIKSRILHPEFRGRMVSAFLAHHFSEVTDYSFTADMETELDNVSAGMTEWKGL 816 L+DRNYVT+K+R+L+PEFRGRMVSAFL+HHFSEVTDYSFTADMETELDNVSAG+TEWKGL Sbjct: 723 LQDRNYVTVKNRVLYPEFRGRMVSAFLSHHFSEVTDYSFTADMETELDNVSAGLTEWKGL 782 Query: 815 LKDYWTRFSMYCAQAGNVDIRQVEKMLEEKFGDFLFASLPNKSRTCPSCLTGTLTFKVSR 636 LKDYWTRFSMYC + NV I QVEKMLE+KFGDFLF+ LP+KSRTCPSC+ GTL FKVSR Sbjct: 783 LKDYWTRFSMYCNRVSNVHIHQVEKMLEKKFGDFLFSFLPDKSRTCPSCMEGTLIFKVSR 842 Query: 635 FGAGYFIGCDEHPKCKYIAKTLYGEEEEDEDPKKMNIVSEPKLLGLHPSSNEKILLKNGP 456 FG+GYFIGCD+HPKCKYIAK L G+++E E + EPK LGL P S+EKILLKNGP Sbjct: 843 FGSGYFIGCDQHPKCKYIAKMLDGDDDE-EVASQDKTFEEPKALGLSPGSSEKILLKNGP 901 Query: 455 YGCYIQLGDDRKGYSPKRASVGQMKNVDSITLEQALDWLQYPVLLGNHLEDGGPVHLKIS 276 YG Y+QLG+DRKGY PKRASV +K+V SITLE AL+ L+YPV LGNH D PV LK++ Sbjct: 902 YGFYLQLGEDRKGYLPKRASVSHIKDVGSITLEDALELLRYPVTLGNHPNDDHPVVLKLA 961 Query: 275 KFGFTIRHKRTIAPVPKNLDPKKITMEKAMKILLSKDAKRCGRPPSKPKDSLDAI 111 K GF+IRH+RTIAPVPKN+ P IT+EKA+K+LL KD K+ GRP +K K L I Sbjct: 962 KNGFSIRHRRTIAPVPKNIKPNDITLEKALKLLLGKDVKQSGRPKNKKKQELHII 1016 >ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera] Length = 1185 Score = 437 bits (1125), Expect = e-120 Identities = 210/292 (71%), Positives = 246/292 (84%) Frame = -2 Query: 995 LKDRNYVTIKSRILHPEFRGRMVSAFLAHHFSEVTDYSFTADMETELDNVSAGMTEWKGL 816 L+DRNYVT+K+R+L+PEFRGRMVSAFL+HHFSEVTDYSFTADMETELDNVSAG+TEWKGL Sbjct: 891 LQDRNYVTVKNRVLYPEFRGRMVSAFLSHHFSEVTDYSFTADMETELDNVSAGLTEWKGL 950 Query: 815 LKDYWTRFSMYCAQAGNVDIRQVEKMLEEKFGDFLFASLPNKSRTCPSCLTGTLTFKVSR 636 LKDYWTRFSMYC + NV I QVEKMLE+KFGDFLF+ LP+KSRTCPSC+ GTL FKVSR Sbjct: 951 LKDYWTRFSMYCNRVSNVHIHQVEKMLEKKFGDFLFSFLPDKSRTCPSCMEGTLIFKVSR 1010 Query: 635 FGAGYFIGCDEHPKCKYIAKTLYGEEEEDEDPKKMNIVSEPKLLGLHPSSNEKILLKNGP 456 FG+GYFIGCD+HPKCKYIAK L G+++E E + EPK LGL P S+EKILLKNGP Sbjct: 1011 FGSGYFIGCDQHPKCKYIAKMLDGDDDE-EVASQDKTFEEPKALGLSPGSSEKILLKNGP 1069 Query: 455 YGCYIQLGDDRKGYSPKRASVGQMKNVDSITLEQALDWLQYPVLLGNHLEDGGPVHLKIS 276 YG Y+QLG+DRKGY PKRASV +K+V SITLE AL+ L+YPV LGNH D PV LK++ Sbjct: 1070 YGFYLQLGEDRKGYLPKRASVSHIKDVGSITLEDALELLRYPVTLGNHPNDDHPVVLKLA 1129 Query: 275 KFGFTIRHKRTIAPVPKNLDPKKITMEKAMKILLSKDAKRCGRPPSKPKDSL 120 K GF+IRH+RTIAPVPKN+ P IT+EKA+K+LL KD K+ GRP +K K + Sbjct: 1130 KNGFSIRHRRTIAPVPKNIKPNDITLEKALKLLLGKDVKQSGRPKNKKKQEV 1181 >ref|XP_003545557.1| PREDICTED: DNA topoisomerase 1-like [Glycine max] Length = 1197 Score = 424 bits (1091), Expect = e-116 Identities = 196/284 (69%), Positives = 240/284 (84%) Frame = -2 Query: 995 LKDRNYVTIKSRILHPEFRGRMVSAFLAHHFSEVTDYSFTADMETELDNVSAGMTEWKGL 816 L+DRNYVT+KSR+L PEFRGRMVSAFL++HFSEVTDYSFTADMETELDNVSAG+TEWKGL Sbjct: 899 LQDRNYVTVKSRVLSPEFRGRMVSAFLSNHFSEVTDYSFTADMETELDNVSAGLTEWKGL 958 Query: 815 LKDYWTRFSMYCAQAGNVDIRQVEKMLEEKFGDFLFASLPNKSRTCPSCLTGTLTFKVSR 636 L+DYWTRF YC + NV I QVEKMLE+KFGD+LFASLP++SR CPSC+ GTL FKVSR Sbjct: 959 LRDYWTRFKSYCERTSNVHIHQVEKMLEKKFGDYLFASLPDQSRVCPSCMEGTLIFKVSR 1018 Query: 635 FGAGYFIGCDEHPKCKYIAKTLYGEEEEDEDPKKMNIVSEPKLLGLHPSSNEKILLKNGP 456 FGAGYFIGCD+HP+CKYIAKTLYG EEE++ + + EPKLLG+ SNEK+LLK+GP Sbjct: 1019 FGAGYFIGCDQHPRCKYIAKTLYGTEEEEDASQPNTRIEEPKLLGVTSGSNEKVLLKSGP 1078 Query: 455 YGCYIQLGDDRKGYSPKRASVGQMKNVDSITLEQALDWLQYPVLLGNHLEDGGPVHLKIS 276 YG Y+QLG+DRKGY P+RASV +K+VDSITL+ AL+ LQYP+ LGNH +DG PV L+++ Sbjct: 1079 YGVYVQLGEDRKGYIPRRASVSHIKDVDSITLKDALEVLQYPLTLGNHPKDGQPVILRLA 1138 Query: 275 KFGFTIRHKRTIAPVPKNLDPKKITMEKAMKILLSKDAKRCGRP 144 + GF +RH+RTIA +PKN+ P +T+EKA++ L D +R GRP Sbjct: 1139 RAGFCVRHRRTIASIPKNVKPSDVTLEKALEYLSGDDVRRSGRP 1182 >ref|XP_003551158.1| PREDICTED: DNA topoisomerase 1-like [Glycine max] Length = 1070 Score = 419 bits (1078), Expect = e-115 Identities = 196/289 (67%), Positives = 237/289 (82%) Frame = -2 Query: 995 LKDRNYVTIKSRILHPEFRGRMVSAFLAHHFSEVTDYSFTADMETELDNVSAGMTEWKGL 816 L+DRNYVT+KSR+L PEFRG MVSAFL+HHFSEV DY FTADMETELDNVS G+TEWKGL Sbjct: 772 LQDRNYVTVKSRVLSPEFRGCMVSAFLSHHFSEVMDYGFTADMETELDNVSGGLTEWKGL 831 Query: 815 LKDYWTRFSMYCAQAGNVDIRQVEKMLEEKFGDFLFASLPNKSRTCPSCLTGTLTFKVSR 636 L+DYWTRF YC + NV I QVEKMLE+KFGD+LFASLP++SR CPSC+ GTL FKVSR Sbjct: 832 LRDYWTRFKSYCERTSNVHIHQVEKMLEKKFGDYLFASLPDQSRVCPSCMEGTLIFKVSR 891 Query: 635 FGAGYFIGCDEHPKCKYIAKTLYGEEEEDEDPKKMNIVSEPKLLGLHPSSNEKILLKNGP 456 FGAGYFIGCD+HP+CKYIAKTLYG EEE++ + + V EPKLLG+ S EK+LLK+GP Sbjct: 892 FGAGYFIGCDQHPRCKYIAKTLYGTEEEEDASQPNSRVEEPKLLGVTSGSYEKVLLKSGP 951 Query: 455 YGCYIQLGDDRKGYSPKRASVGQMKNVDSITLEQALDWLQYPVLLGNHLEDGGPVHLKIS 276 YG Y+QLG+DRKGY PKRASV +K+VDSITL+ AL+ LQYP+ LGNH +DG PV LK++ Sbjct: 952 YGVYVQLGEDRKGYIPKRASVSHIKDVDSITLKDALEVLQYPLTLGNHPKDGQPVILKLA 1011 Query: 275 KFGFTIRHKRTIAPVPKNLDPKKITMEKAMKILLSKDAKRCGRPPSKPK 129 + G +RH+RT+A VPKN+ P +T+EKA++ L D +R GRP K K Sbjct: 1012 RAGLCVRHRRTVASVPKNVKPSDVTLEKALEYLSGDDVRRSGRPKGKSK 1060 >ref|NP_194849.3| DNA topoisomerase, type IA, core [Arabidopsis thaliana] gi|332660478|gb|AEE85878.1| DNA topoisomerase, type IA, core [Arabidopsis thaliana] Length = 1284 Score = 414 bits (1063), Expect = e-113 Identities = 188/285 (65%), Positives = 240/285 (84%) Frame = -2 Query: 995 LKDRNYVTIKSRILHPEFRGRMVSAFLAHHFSEVTDYSFTADMETELDNVSAGMTEWKGL 816 L+ R YVTIK+R+L+PEFR RMVSAFL H+F+E+TDYSFTADMETELDNVS G+TEWKGL Sbjct: 982 LQHRKYVTIKNRVLYPEFRARMVSAFLTHYFTEITDYSFTADMETELDNVSGGVTEWKGL 1041 Query: 815 LKDYWTRFSMYCAQAGNVDIRQVEKMLEEKFGDFLFASLPNKSRTCPSCLTGTLTFKVSR 636 L+DYWTRFS YC + NV QVEKMLE+K+ D LF+ LP SRTCPSC+ GTL+FK S+ Sbjct: 1042 LRDYWTRFSAYCKRVENVQRSQVEKMLEKKYEDVLFSLLPYPSRTCPSCMEGTLSFKASK 1101 Query: 635 FGAGYFIGCDEHPKCKYIAKTLYGEEEEDEDPKKMNIVSEPKLLGLHPSSNEKILLKNGP 456 FGAGYFIGCD+HP CK+IAKTLYGE+E+++DP K N V EPKLLGLHP+++EK++LK GP Sbjct: 1102 FGAGYFIGCDQHPSCKFIAKTLYGEDEDEDDPPKNNCVEEPKLLGLHPNTSEKVILKCGP 1161 Query: 455 YGCYIQLGDDRKGYSPKRASVGQMKNVDSITLEQALDWLQYPVLLGNHLEDGGPVHLKIS 276 YG Y+QLG+D+KG++PKRA+ +K+V+SITLE AL+ L+YP+ LG H EDG PV LK+S Sbjct: 1162 YGHYVQLGEDKKGHTPKRANAAHIKDVNSITLESALELLRYPLTLGTHPEDGQPVVLKLS 1221 Query: 275 KFGFTIRHKRTIAPVPKNLDPKKITMEKAMKILLSKDAKRCGRPP 141 K GFTI+H+R +A VPKN +P ++T+E+AMK+L K+ ++ GRPP Sbjct: 1222 KSGFTIKHRRNMATVPKNTEPGEVTLERAMKLLSGKNVRKSGRPP 1266