BLASTX nr result
ID: Coptis21_contig00024482
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00024482 (876 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002530660.1| DNA mismatch repair protein mutS, putative [... 475 e-132 ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glyc... 471 e-131 ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-... 469 e-130 ref|XP_003563107.1| PREDICTED: mutS protein homolog 4-like [Brac... 469 e-130 gb|AFP73610.1| mutS-like protein 4 [Hordeum vulgare subsp. vulgare] 469 e-130 >ref|XP_002530660.1| DNA mismatch repair protein mutS, putative [Ricinus communis] gi|223529793|gb|EEF31729.1| DNA mismatch repair protein mutS, putative [Ricinus communis] Length = 553 Score = 475 bits (1222), Expect = e-132 Identities = 229/291 (78%), Positives = 260/291 (89%) Frame = -2 Query: 875 GLLDVARRSFCDSSEAIHSLANTYREDFQLPNLKIPFNNRQGFYLSIPQKDIKGRLPSKF 696 GLLD+ARR+FCD+SE IH+LAN YRE+F++PNLK+PFN+RQGFY SIP KDI+G+LPSKF Sbjct: 127 GLLDIARRTFCDTSEGIHNLANKYREEFKMPNLKLPFNSRQGFYFSIPHKDIQGKLPSKF 186 Query: 695 IQVVKHGNNVHCSTLELASLNVRNKSAAAECYTRTEICLEALMDGIRKDVSVXXXXXXXX 516 IQV+KHGNN+HCSTLELASLNVRN+SAA ECY RTE+CLEAL+D IR+D S Sbjct: 187 IQVLKHGNNIHCSTLELASLNVRNRSAAEECYIRTEVCLEALLDAIREDASALTLLAEVL 246 Query: 515 XXLDMIVNSFAHTISTKPVDQYTRPEFTENGPLAIDAGRHPILESLHTDFIPNNVFLSEA 336 LDM+VNSFAHTISTK VD+YTRPEFT +GPLAIDAGRHPILES+H DF+PNN+F+SEA Sbjct: 247 CLLDMLVNSFAHTISTKLVDRYTRPEFTSSGPLAIDAGRHPILESIHNDFVPNNLFVSEA 306 Query: 335 SNMVIVMGPNMSGKSGKSTYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNL 156 SNMVIVMGPNM SGKSTYLQQVCL+VILAQIGCYVPARF ++R+ DRIFTRMG+ DNL Sbjct: 307 SNMVIVMGPNM---SGKSTYLQQVCLIVILAQIGCYVPARFLTIRIVDRIFTRMGSVDNL 363 Query: 155 ESNSSTFMTEMKETAFIMQNVSSRSLIVMDELGRATSSSDGLAIVWSCCEH 3 ESNSSTFMTEMKETAFIMQNVS RSLI+MDELGRATSSSDG +I WSCCEH Sbjct: 364 ESNSSTFMTEMKETAFIMQNVSQRSLIIMDELGRATSSSDGFSIAWSCCEH 414 >ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glycine max] Length = 794 Score = 471 bits (1212), Expect = e-131 Identities = 230/291 (79%), Positives = 259/291 (89%) Frame = -2 Query: 875 GLLDVARRSFCDSSEAIHSLANTYREDFQLPNLKIPFNNRQGFYLSIPQKDIKGRLPSKF 696 GLLD++RR+FC++SEAIH+LAN YREDF+LPNLK+ + NRQGF+ IPQK+I+G+LPSKF Sbjct: 366 GLLDISRRAFCETSEAIHNLANNYREDFKLPNLKLTYKNRQGFHFVIPQKNIQGKLPSKF 425 Query: 695 IQVVKHGNNVHCSTLELASLNVRNKSAAAECYTRTEICLEALMDGIRKDVSVXXXXXXXX 516 IQVVKHGNN+ CS+LELASLN RNKSAAAECYTRTE+CLE LMD IR++VSV Sbjct: 426 IQVVKHGNNIRCSSLELASLNARNKSAAAECYTRTEVCLEELMDDIRENVSVLTLLAEVL 485 Query: 515 XXLDMIVNSFAHTISTKPVDQYTRPEFTENGPLAIDAGRHPILESLHTDFIPNNVFLSEA 336 LDMIVNSFAH ISTKPVD+YTRPEFTENGPLAID+GRHPILES+H DF+ NN+FL+EA Sbjct: 486 CLLDMIVNSFAHMISTKPVDRYTRPEFTENGPLAIDSGRHPILESIHNDFVANNIFLTEA 545 Query: 335 SNMVIVMGPNMSGKSGKSTYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNL 156 SNM IVMGPNM SGKSTYLQQVCL+VILAQ+GCYVPARFS++RV DR+FTRMG DNL Sbjct: 546 SNMAIVMGPNM---SGKSTYLQQVCLIVILAQVGCYVPARFSTVRVVDRMFTRMGAVDNL 602 Query: 155 ESNSSTFMTEMKETAFIMQNVSSRSLIVMDELGRATSSSDGLAIVWSCCEH 3 ESNSSTFMTEMKETAFIMQNVS RSLIVMDELGRATSSSDG AI WSCCEH Sbjct: 603 ESNSSTFMTEMKETAFIMQNVSQRSLIVMDELGRATSSSDGFAIAWSCCEH 653 >ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-like, partial [Cucumis sativus] Length = 770 Score = 469 bits (1207), Expect = e-130 Identities = 227/291 (78%), Positives = 260/291 (89%) Frame = -2 Query: 875 GLLDVARRSFCDSSEAIHSLANTYREDFQLPNLKIPFNNRQGFYLSIPQKDIKGRLPSKF 696 GLLD+ARR+FCD+SEAIH+LAN YRE+++L NLK+PFNNRQGFYLSIP KD++G+LP+KF Sbjct: 344 GLLDIARRTFCDTSEAIHNLANKYREEYKLSNLKLPFNNRQGFYLSIPHKDVQGKLPNKF 403 Query: 695 IQVVKHGNNVHCSTLELASLNVRNKSAAAECYTRTEICLEALMDGIRKDVSVXXXXXXXX 516 IQV+KHGNN+ CSTLELASLNVRNKSAA ECY RTEICLE L+D IR+DVS+ Sbjct: 404 IQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTEICLEGLVDAIREDVSMLTLLAEVL 463 Query: 515 XXLDMIVNSFAHTISTKPVDQYTRPEFTENGPLAIDAGRHPILESLHTDFIPNNVFLSEA 336 LDMIVNSFAHTISTKPVD+YTRP FTENGP+AI+A RHPILES+H DF+ N++FLSEA Sbjct: 464 CLLDMIVNSFAHTISTKPVDRYTRPNFTENGPMAIEAARHPILESIHNDFVANSIFLSEA 523 Query: 335 SNMVIVMGPNMSGKSGKSTYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNL 156 SNM+IVMGPNM SGKSTYLQQ+CL+VILAQIGCYVPA FS+LRV DRIFTRMGT D+L Sbjct: 524 SNMIIVMGPNM---SGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDDSL 580 Query: 155 ESNSSTFMTEMKETAFIMQNVSSRSLIVMDELGRATSSSDGLAIVWSCCEH 3 ESNSSTFMTEMKETAF+MQNVS RSL+V+DELGRATSSSDG AI WSCCE+ Sbjct: 581 ESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEY 631 >ref|XP_003563107.1| PREDICTED: mutS protein homolog 4-like [Brachypodium distachyon] Length = 726 Score = 469 bits (1207), Expect = e-130 Identities = 227/291 (78%), Positives = 260/291 (89%) Frame = -2 Query: 875 GLLDVARRSFCDSSEAIHSLANTYREDFQLPNLKIPFNNRQGFYLSIPQKDIKGRLPSKF 696 GLLDVARRSFCD+SEAIH+LA YRE+ QLPNLKIP+NNR GFY IPQKDI G+LPSKF Sbjct: 293 GLLDVARRSFCDTSEAIHNLATKYREECQLPNLKIPYNNRLGFYFIIPQKDITGKLPSKF 352 Query: 695 IQVVKHGNNVHCSTLELASLNVRNKSAAAECYTRTEICLEALMDGIRKDVSVXXXXXXXX 516 IQVV+HG NVHCS+ ELASLN RNKSAAAEC+ RTE+CLE L+ IR+D+ + Sbjct: 353 IQVVRHGKNVHCSSFELASLNARNKSAAAECFLRTELCLEGLISEIREDIGILTLLAEVL 412 Query: 515 XXLDMIVNSFAHTISTKPVDQYTRPEFTENGPLAIDAGRHPILESLHTDFIPNNVFLSEA 336 LDMIVNSFA+TISTKPVD+YTRPEFT++GP+AI+AGRHPILE LHTDF+PNN+FLSEA Sbjct: 413 CLLDMIVNSFANTISTKPVDRYTRPEFTDDGPMAINAGRHPILEGLHTDFVPNNIFLSEA 472 Query: 335 SNMVIVMGPNMSGKSGKSTYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNL 156 SNMV+VMGPNM SGKSTYLQQ+CL+VILAQ+GCYVPA+F+SLRV DRIFTR+GTGDN+ Sbjct: 473 SNMVLVMGPNM---SGKSTYLQQICLIVILAQVGCYVPAQFASLRVVDRIFTRIGTGDNV 529 Query: 155 ESNSSTFMTEMKETAFIMQNVSSRSLIVMDELGRATSSSDGLAIVWSCCEH 3 E+NSSTFMTEMKETAFIMQNVSS+SL+V+DELGRATSSSDGLAI WSCCEH Sbjct: 530 ENNSSTFMTEMKETAFIMQNVSSKSLVVVDELGRATSSSDGLAIAWSCCEH 580 >gb|AFP73610.1| mutS-like protein 4 [Hordeum vulgare subsp. vulgare] Length = 720 Score = 469 bits (1206), Expect = e-130 Identities = 227/291 (78%), Positives = 261/291 (89%) Frame = -2 Query: 875 GLLDVARRSFCDSSEAIHSLANTYREDFQLPNLKIPFNNRQGFYLSIPQKDIKGRLPSKF 696 GLLDVARRSFCD+SEAIH+LA YRE+F LPNLKIP+NNR GFY IPQ+DI +LP+KF Sbjct: 293 GLLDVARRSFCDTSEAIHNLATKYREEFTLPNLKIPYNNRLGFYFIIPQRDITEKLPNKF 352 Query: 695 IQVVKHGNNVHCSTLELASLNVRNKSAAAECYTRTEICLEALMDGIRKDVSVXXXXXXXX 516 IQVV+HG NVHCS+ ELASLNVRNKSAAAEC+ RTE+CLE L+ IR+D+ + Sbjct: 353 IQVVRHGKNVHCSSFELASLNVRNKSAAAECFLRTELCLEGLISEIREDICILTLLAEVL 412 Query: 515 XXLDMIVNSFAHTISTKPVDQYTRPEFTENGPLAIDAGRHPILESLHTDFIPNNVFLSEA 336 LDMIVNSFA+TISTKPVD+YTRPEFT++GP+AI+AGRHPILESLHTDF+PNN+FLSEA Sbjct: 413 CLLDMIVNSFAYTISTKPVDRYTRPEFTDDGPMAINAGRHPILESLHTDFVPNNIFLSEA 472 Query: 335 SNMVIVMGPNMSGKSGKSTYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNL 156 SNMV+VMGPNM SGKSTYLQQ+CL+VILAQ+GCYVPA+F+SLRV DRIFTR+GTGDN+ Sbjct: 473 SNMVLVMGPNM---SGKSTYLQQICLIVILAQVGCYVPAQFASLRVVDRIFTRIGTGDNV 529 Query: 155 ESNSSTFMTEMKETAFIMQNVSSRSLIVMDELGRATSSSDGLAIVWSCCEH 3 E+NSSTFMTEMKETAFIMQNVSSRSL+V+DELGRATSSSDGLAI WSCCEH Sbjct: 530 ENNSSTFMTEMKETAFIMQNVSSRSLVVVDELGRATSSSDGLAIAWSCCEH 580