BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024482
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530660.1| DNA mismatch repair protein mutS, putative [...   475   e-132
ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glyc...   471   e-131
ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-...   469   e-130
ref|XP_003563107.1| PREDICTED: mutS protein homolog 4-like [Brac...   469   e-130
gb|AFP73610.1| mutS-like protein 4 [Hordeum vulgare subsp. vulgare]   469   e-130

>ref|XP_002530660.1| DNA mismatch repair protein mutS, putative [Ricinus communis]
           gi|223529793|gb|EEF31729.1| DNA mismatch repair protein
           mutS, putative [Ricinus communis]
          Length = 553

 Score =  475 bits (1222), Expect = e-132
 Identities = 229/291 (78%), Positives = 260/291 (89%)
 Frame = -2

Query: 875 GLLDVARRSFCDSSEAIHSLANTYREDFQLPNLKIPFNNRQGFYLSIPQKDIKGRLPSKF 696
           GLLD+ARR+FCD+SE IH+LAN YRE+F++PNLK+PFN+RQGFY SIP KDI+G+LPSKF
Sbjct: 127 GLLDIARRTFCDTSEGIHNLANKYREEFKMPNLKLPFNSRQGFYFSIPHKDIQGKLPSKF 186

Query: 695 IQVVKHGNNVHCSTLELASLNVRNKSAAAECYTRTEICLEALMDGIRKDVSVXXXXXXXX 516
           IQV+KHGNN+HCSTLELASLNVRN+SAA ECY RTE+CLEAL+D IR+D S         
Sbjct: 187 IQVLKHGNNIHCSTLELASLNVRNRSAAEECYIRTEVCLEALLDAIREDASALTLLAEVL 246

Query: 515 XXLDMIVNSFAHTISTKPVDQYTRPEFTENGPLAIDAGRHPILESLHTDFIPNNVFLSEA 336
             LDM+VNSFAHTISTK VD+YTRPEFT +GPLAIDAGRHPILES+H DF+PNN+F+SEA
Sbjct: 247 CLLDMLVNSFAHTISTKLVDRYTRPEFTSSGPLAIDAGRHPILESIHNDFVPNNLFVSEA 306

Query: 335 SNMVIVMGPNMSGKSGKSTYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNL 156
           SNMVIVMGPNM   SGKSTYLQQVCL+VILAQIGCYVPARF ++R+ DRIFTRMG+ DNL
Sbjct: 307 SNMVIVMGPNM---SGKSTYLQQVCLIVILAQIGCYVPARFLTIRIVDRIFTRMGSVDNL 363

Query: 155 ESNSSTFMTEMKETAFIMQNVSSRSLIVMDELGRATSSSDGLAIVWSCCEH 3
           ESNSSTFMTEMKETAFIMQNVS RSLI+MDELGRATSSSDG +I WSCCEH
Sbjct: 364 ESNSSTFMTEMKETAFIMQNVSQRSLIIMDELGRATSSSDGFSIAWSCCEH 414


>ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glycine max]
          Length = 794

 Score =  471 bits (1212), Expect = e-131
 Identities = 230/291 (79%), Positives = 259/291 (89%)
 Frame = -2

Query: 875  GLLDVARRSFCDSSEAIHSLANTYREDFQLPNLKIPFNNRQGFYLSIPQKDIKGRLPSKF 696
            GLLD++RR+FC++SEAIH+LAN YREDF+LPNLK+ + NRQGF+  IPQK+I+G+LPSKF
Sbjct: 366  GLLDISRRAFCETSEAIHNLANNYREDFKLPNLKLTYKNRQGFHFVIPQKNIQGKLPSKF 425

Query: 695  IQVVKHGNNVHCSTLELASLNVRNKSAAAECYTRTEICLEALMDGIRKDVSVXXXXXXXX 516
            IQVVKHGNN+ CS+LELASLN RNKSAAAECYTRTE+CLE LMD IR++VSV        
Sbjct: 426  IQVVKHGNNIRCSSLELASLNARNKSAAAECYTRTEVCLEELMDDIRENVSVLTLLAEVL 485

Query: 515  XXLDMIVNSFAHTISTKPVDQYTRPEFTENGPLAIDAGRHPILESLHTDFIPNNVFLSEA 336
              LDMIVNSFAH ISTKPVD+YTRPEFTENGPLAID+GRHPILES+H DF+ NN+FL+EA
Sbjct: 486  CLLDMIVNSFAHMISTKPVDRYTRPEFTENGPLAIDSGRHPILESIHNDFVANNIFLTEA 545

Query: 335  SNMVIVMGPNMSGKSGKSTYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNL 156
            SNM IVMGPNM   SGKSTYLQQVCL+VILAQ+GCYVPARFS++RV DR+FTRMG  DNL
Sbjct: 546  SNMAIVMGPNM---SGKSTYLQQVCLIVILAQVGCYVPARFSTVRVVDRMFTRMGAVDNL 602

Query: 155  ESNSSTFMTEMKETAFIMQNVSSRSLIVMDELGRATSSSDGLAIVWSCCEH 3
            ESNSSTFMTEMKETAFIMQNVS RSLIVMDELGRATSSSDG AI WSCCEH
Sbjct: 603  ESNSSTFMTEMKETAFIMQNVSQRSLIVMDELGRATSSSDGFAIAWSCCEH 653


>ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-like, partial [Cucumis
            sativus]
          Length = 770

 Score =  469 bits (1207), Expect = e-130
 Identities = 227/291 (78%), Positives = 260/291 (89%)
 Frame = -2

Query: 875  GLLDVARRSFCDSSEAIHSLANTYREDFQLPNLKIPFNNRQGFYLSIPQKDIKGRLPSKF 696
            GLLD+ARR+FCD+SEAIH+LAN YRE+++L NLK+PFNNRQGFYLSIP KD++G+LP+KF
Sbjct: 344  GLLDIARRTFCDTSEAIHNLANKYREEYKLSNLKLPFNNRQGFYLSIPHKDVQGKLPNKF 403

Query: 695  IQVVKHGNNVHCSTLELASLNVRNKSAAAECYTRTEICLEALMDGIRKDVSVXXXXXXXX 516
            IQV+KHGNN+ CSTLELASLNVRNKSAA ECY RTEICLE L+D IR+DVS+        
Sbjct: 404  IQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTEICLEGLVDAIREDVSMLTLLAEVL 463

Query: 515  XXLDMIVNSFAHTISTKPVDQYTRPEFTENGPLAIDAGRHPILESLHTDFIPNNVFLSEA 336
              LDMIVNSFAHTISTKPVD+YTRP FTENGP+AI+A RHPILES+H DF+ N++FLSEA
Sbjct: 464  CLLDMIVNSFAHTISTKPVDRYTRPNFTENGPMAIEAARHPILESIHNDFVANSIFLSEA 523

Query: 335  SNMVIVMGPNMSGKSGKSTYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNL 156
            SNM+IVMGPNM   SGKSTYLQQ+CL+VILAQIGCYVPA FS+LRV DRIFTRMGT D+L
Sbjct: 524  SNMIIVMGPNM---SGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDDSL 580

Query: 155  ESNSSTFMTEMKETAFIMQNVSSRSLIVMDELGRATSSSDGLAIVWSCCEH 3
            ESNSSTFMTEMKETAF+MQNVS RSL+V+DELGRATSSSDG AI WSCCE+
Sbjct: 581  ESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEY 631


>ref|XP_003563107.1| PREDICTED: mutS protein homolog 4-like [Brachypodium distachyon]
          Length = 726

 Score =  469 bits (1207), Expect = e-130
 Identities = 227/291 (78%), Positives = 260/291 (89%)
 Frame = -2

Query: 875  GLLDVARRSFCDSSEAIHSLANTYREDFQLPNLKIPFNNRQGFYLSIPQKDIKGRLPSKF 696
            GLLDVARRSFCD+SEAIH+LA  YRE+ QLPNLKIP+NNR GFY  IPQKDI G+LPSKF
Sbjct: 293  GLLDVARRSFCDTSEAIHNLATKYREECQLPNLKIPYNNRLGFYFIIPQKDITGKLPSKF 352

Query: 695  IQVVKHGNNVHCSTLELASLNVRNKSAAAECYTRTEICLEALMDGIRKDVSVXXXXXXXX 516
            IQVV+HG NVHCS+ ELASLN RNKSAAAEC+ RTE+CLE L+  IR+D+ +        
Sbjct: 353  IQVVRHGKNVHCSSFELASLNARNKSAAAECFLRTELCLEGLISEIREDIGILTLLAEVL 412

Query: 515  XXLDMIVNSFAHTISTKPVDQYTRPEFTENGPLAIDAGRHPILESLHTDFIPNNVFLSEA 336
              LDMIVNSFA+TISTKPVD+YTRPEFT++GP+AI+AGRHPILE LHTDF+PNN+FLSEA
Sbjct: 413  CLLDMIVNSFANTISTKPVDRYTRPEFTDDGPMAINAGRHPILEGLHTDFVPNNIFLSEA 472

Query: 335  SNMVIVMGPNMSGKSGKSTYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNL 156
            SNMV+VMGPNM   SGKSTYLQQ+CL+VILAQ+GCYVPA+F+SLRV DRIFTR+GTGDN+
Sbjct: 473  SNMVLVMGPNM---SGKSTYLQQICLIVILAQVGCYVPAQFASLRVVDRIFTRIGTGDNV 529

Query: 155  ESNSSTFMTEMKETAFIMQNVSSRSLIVMDELGRATSSSDGLAIVWSCCEH 3
            E+NSSTFMTEMKETAFIMQNVSS+SL+V+DELGRATSSSDGLAI WSCCEH
Sbjct: 530  ENNSSTFMTEMKETAFIMQNVSSKSLVVVDELGRATSSSDGLAIAWSCCEH 580


>gb|AFP73610.1| mutS-like protein 4 [Hordeum vulgare subsp. vulgare]
          Length = 720

 Score =  469 bits (1206), Expect = e-130
 Identities = 227/291 (78%), Positives = 261/291 (89%)
 Frame = -2

Query: 875  GLLDVARRSFCDSSEAIHSLANTYREDFQLPNLKIPFNNRQGFYLSIPQKDIKGRLPSKF 696
            GLLDVARRSFCD+SEAIH+LA  YRE+F LPNLKIP+NNR GFY  IPQ+DI  +LP+KF
Sbjct: 293  GLLDVARRSFCDTSEAIHNLATKYREEFTLPNLKIPYNNRLGFYFIIPQRDITEKLPNKF 352

Query: 695  IQVVKHGNNVHCSTLELASLNVRNKSAAAECYTRTEICLEALMDGIRKDVSVXXXXXXXX 516
            IQVV+HG NVHCS+ ELASLNVRNKSAAAEC+ RTE+CLE L+  IR+D+ +        
Sbjct: 353  IQVVRHGKNVHCSSFELASLNVRNKSAAAECFLRTELCLEGLISEIREDICILTLLAEVL 412

Query: 515  XXLDMIVNSFAHTISTKPVDQYTRPEFTENGPLAIDAGRHPILESLHTDFIPNNVFLSEA 336
              LDMIVNSFA+TISTKPVD+YTRPEFT++GP+AI+AGRHPILESLHTDF+PNN+FLSEA
Sbjct: 413  CLLDMIVNSFAYTISTKPVDRYTRPEFTDDGPMAINAGRHPILESLHTDFVPNNIFLSEA 472

Query: 335  SNMVIVMGPNMSGKSGKSTYLQQVCLVVILAQIGCYVPARFSSLRVADRIFTRMGTGDNL 156
            SNMV+VMGPNM   SGKSTYLQQ+CL+VILAQ+GCYVPA+F+SLRV DRIFTR+GTGDN+
Sbjct: 473  SNMVLVMGPNM---SGKSTYLQQICLIVILAQVGCYVPAQFASLRVVDRIFTRIGTGDNV 529

Query: 155  ESNSSTFMTEMKETAFIMQNVSSRSLIVMDELGRATSSSDGLAIVWSCCEH 3
            E+NSSTFMTEMKETAFIMQNVSSRSL+V+DELGRATSSSDGLAI WSCCEH
Sbjct: 530  ENNSSTFMTEMKETAFIMQNVSSRSLVVVDELGRATSSSDGLAIAWSCCEH 580