BLASTX nr result

ID: Coptis21_contig00024479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024479
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39105.3| unnamed protein product [Vitis vinifera]              222   6e-56
ref|XP_003535833.1| PREDICTED: ABC transporter G family member 2...   220   2e-55
ref|XP_003519092.1| PREDICTED: ABC transporter G family member 2...   220   3e-55
ref|XP_002322764.1| white-brown-complex ABC transporter family [...   218   8e-55
ref|XP_003553629.1| PREDICTED: ABC transporter G family member 2...   217   2e-54

>emb|CBI39105.3| unnamed protein product [Vitis vinifera]
          Length = 738

 Score =  222 bits (566), Expect = 6e-56
 Identities = 125/242 (51%), Positives = 157/242 (64%), Gaps = 1/242 (0%)
 Frame = -1

Query: 724 TSSFSNVGSSVLLTIKMETPTSGLARTQSDQLDIAIRKSPSRTFLNEADXXXXXXXXXXX 545
           T S   V ++  +   M +PTSG A   ++      RKS  R+ ++ +            
Sbjct: 3   TKSDQLVETAEAVAAAMRSPTSGEATGGAESGGTLSRKSSRRSMMSASPG---------- 52

Query: 544 XKRMPSPGRKTHIRKSRSAQLKLDLEEVXXXXXXXXXXXXXXXXXXXXXXFTVPPEDIAD 365
             R     + THIRKSRSAQ+KLDL+EV                      FTVPP++I+D
Sbjct: 53  --RAGGNSKNTHIRKSRSAQIKLDLDEVSSGAALSRASSASLGFSFSFTGFTVPPDEISD 110

Query: 364 LHGFSDDDIPEDHEATTRK-RVHSEPTLPIFLKFTEVKYKVVVKSVRTTVEKDILHGITG 188
              FSDDD P+D EA  RK R+ +EPTLPI+LKF +V YKV++K +RT VEK+IL+GITG
Sbjct: 111 FKPFSDDDTPDDLEAGMRKQRIQAEPTLPIYLKFKDVTYKVILKGMRTNVEKEILNGITG 170

Query: 187 SASPGEVLALMGPSGSGKTTLLNLLGGRLDRSLPGGSITYNDQPYSKALKRRIGFVTQDD 8
           S +PGEVLALMGPSGSGKTTLLNLLGGRL++   GGS+TYNDQPYSK+LK +IGFVTQDD
Sbjct: 171 SVNPGEVLALMGPSGSGKTTLLNLLGGRLNQPTAGGSVTYNDQPYSKSLKSKIGFVTQDD 230

Query: 7   VL 2
           VL
Sbjct: 231 VL 232


>ref|XP_003535833.1| PREDICTED: ABC transporter G family member 22-like [Glycine max]
          Length = 738

 Score =  220 bits (561), Expect = 2e-55
 Identities = 129/232 (55%), Positives = 150/232 (64%), Gaps = 7/232 (3%)
 Frame = -1

Query: 676 METPTSGLARTQSDQL---DIAIRKSPSRTFLNEADXXXXXXXXXXXXKRMPSPGRK-TH 509
           ME   + L RT+SDQL    +A  KSP  +  +                  P  G K TH
Sbjct: 1   MEKANTSLVRTKSDQLLESMVAGLKSPPSSDHSANGVVDSRKSSRWLTGASPGRGGKNTH 60

Query: 508 IRKSRSAQL---KLDLEEVXXXXXXXXXXXXXXXXXXXXXXFTVPPEDIADLHGFSDDDI 338
           IRKSRSAQ+   KL+L++V                      FT+PPE+IAD   FSDDDI
Sbjct: 61  IRKSRSAQISQMKLELDDVSSGAALSRASSASLGLSFSFTGFTMPPEEIADSKPFSDDDI 120

Query: 337 PEDHEATTRKRVHSEPTLPIFLKFTEVKYKVVVKSVRTTVEKDILHGITGSASPGEVLAL 158
           PED EA  R +  +EPTLPI+LKFT+V YK+V+K + TT EKDIL+GITGS +PGEVLAL
Sbjct: 121 PEDIEAGPRTKFQTEPTLPIYLKFTDVTYKIVIKGMTTTEEKDILNGITGSVNPGEVLAL 180

Query: 157 MGPSGSGKTTLLNLLGGRLDRSLPGGSITYNDQPYSKALKRRIGFVTQDDVL 2
           MGPSGSGKTTLLNLLGGRL   + GGSITYNDQPYSK LK RIGFVTQDDVL
Sbjct: 181 MGPSGSGKTTLLNLLGGRLSHPISGGSITYNDQPYSKFLKSRIGFVTQDDVL 232


>ref|XP_003519092.1| PREDICTED: ABC transporter G family member 22-like [Glycine max]
          Length = 743

 Score =  220 bits (560), Expect = 3e-55
 Identities = 130/237 (54%), Positives = 153/237 (64%), Gaps = 12/237 (5%)
 Frame = -1

Query: 676 METPTSGLARTQSDQLD---IAIRKSPSRTFLNEADXXXXXXXXXXXXKRM---PSPGR- 518
           ME   + L RT+SDQL    +A  KSP+ +  +                R     SPGR 
Sbjct: 1   MEKANTSLVRTKSDQLVESMVAALKSPASSDHSANGVVEGGGTISRKSSRRLTGASPGRG 60

Query: 517 --KTHIRKSRSAQL---KLDLEEVXXXXXXXXXXXXXXXXXXXXXXFTVPPEDIADLHGF 353
              THIRKSRSAQ+   KL+L++V                      FT+PPE+IAD   F
Sbjct: 61  GKNTHIRKSRSAQISQMKLELDDVSSGAALSRASSASLGLSFSFTGFTMPPEEIADSKPF 120

Query: 352 SDDDIPEDHEATTRKRVHSEPTLPIFLKFTEVKYKVVVKSVRTTVEKDILHGITGSASPG 173
           SDDDIPED E+  R +  +EPTLPI+LKFT+V YK+V+K + TT EKDIL+GITGS +PG
Sbjct: 121 SDDDIPEDIESGPRTKFQTEPTLPIYLKFTDVTYKIVIKGMTTTEEKDILNGITGSVNPG 180

Query: 172 EVLALMGPSGSGKTTLLNLLGGRLDRSLPGGSITYNDQPYSKALKRRIGFVTQDDVL 2
           EVLALMGPSGSGKTTLLNLLGGRL   + GGSITYNDQPYSK LK RIGFVTQDDVL
Sbjct: 181 EVLALMGPSGSGKTTLLNLLGGRLSHPISGGSITYNDQPYSKFLKSRIGFVTQDDVL 237


>ref|XP_002322764.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222867394|gb|EEF04525.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 744

 Score =  218 bits (556), Expect = 8e-55
 Identities = 129/240 (53%), Positives = 157/240 (65%), Gaps = 15/240 (6%)
 Frame = -1

Query: 676 METPTSGLARTQSDQLDIAIR---KSPSRT-FLNEADXXXXXXXXXXXXKRM---PSPGR 518
           ME   + LART+S+QL   +    KSPS    +  +D            KR+    SPGR
Sbjct: 1   MEKENTSLARTRSEQLVETVAAAFKSPSNNEAIGVSDGSSGGTLSRKSSKRLMMAASPGR 60

Query: 517 KT-------HIRKSRSAQLKLDLEEVXXXXXXXXXXXXXXXXXXXXXXFTVPPEDIADLH 359
            T       HIRKSRSAQ+K DL++V                      F +PP++IAD  
Sbjct: 61  STSGGNKNTHIRKSRSAQMKFDLDDVSSGAALSRASSASLGFSFSFTGFNMPPDEIADSK 120

Query: 358 GFSDDDIPEDHEATTRK-RVHSEPTLPIFLKFTEVKYKVVVKSVRTTVEKDILHGITGSA 182
            FSDDDIPED EA TRK +  +EPTLPI+LKFT+V YKV++K + +T EKDIL+GI+GS 
Sbjct: 121 PFSDDDIPEDLEAGTRKPKFQTEPTLPIYLKFTDVTYKVIIKGMTSTEEKDILYGISGSV 180

Query: 181 SPGEVLALMGPSGSGKTTLLNLLGGRLDRSLPGGSITYNDQPYSKALKRRIGFVTQDDVL 2
            PGEVLALMGPSGSGKTTLLNL+GGRL+++  GGS+TYNDQPYSK LK RIGFVTQDDVL
Sbjct: 181 DPGEVLALMGPSGSGKTTLLNLIGGRLNQTTVGGSLTYNDQPYSKFLKSRIGFVTQDDVL 240


>ref|XP_003553629.1| PREDICTED: ABC transporter G family member 22-like [Glycine max]
          Length = 736

 Score =  217 bits (552), Expect = 2e-54
 Identities = 127/226 (56%), Positives = 151/226 (66%), Gaps = 5/226 (2%)
 Frame = -1

Query: 664 TSGLARTQSDQLDIAIRKSPSRTFLNEADXXXXXXXXXXXXKRMPSPG----RKTHIRKS 497
           TS LART+SDQL   +  +  ++    A+                SPG    R T+IRK+
Sbjct: 6   TSSLARTKSDQLLETVATTAEKS-PPSAEGGGVLSRKSSWRMTASSPGGGGGRNTYIRKA 64

Query: 496 RSAQLKLDLEEVXXXXXXXXXXXXXXXXXXXXXXFTVPPEDIADLHGFSDDDIPEDHEAT 317
           RSAQLK++++EV                      FT+PP++IAD   FSDDDIPED EA 
Sbjct: 65  RSAQLKVEVDEVGSGVALSRASSASLGLSFSFTGFTLPPDEIADSKPFSDDDIPEDIEAG 124

Query: 316 TRK-RVHSEPTLPIFLKFTEVKYKVVVKSVRTTVEKDILHGITGSASPGEVLALMGPSGS 140
           T K +  +EPTLPI+LKFT+V YKVV+K + TT EKDIL GITGS +PGEVLALMGPSGS
Sbjct: 125 TPKPKFQTEPTLPIYLKFTDVTYKVVMKGITTTKEKDILKGITGSVNPGEVLALMGPSGS 184

Query: 139 GKTTLLNLLGGRLDRSLPGGSITYNDQPYSKALKRRIGFVTQDDVL 2
           GKT+LLNLLGGRL +S  GGSITYNDQPYSK LK RIGFVTQDDVL
Sbjct: 185 GKTSLLNLLGGRLIQSTIGGSITYNDQPYSKFLKSRIGFVTQDDVL 230


Top