BLASTX nr result

ID: Coptis21_contig00024470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024470
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528143.1| PREDICTED: uncharacterized protein LOC100778...    66   3e-09
ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [S...    64   1e-08
ref|XP_003535019.1| PREDICTED: uncharacterized protein LOC100795...    62   4e-08
ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804...    62   5e-08
ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799...    62   5e-08

>ref|XP_003528143.1| PREDICTED: uncharacterized protein LOC100778359 [Glycine max]
          Length = 2621

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
 Frame = +1

Query: 37   KKLWRLQIDAGTQLFLWKLYSNGLPTGDVLHKHKFK-GDITCGFCQRSVESAHHLFFSCS 213
            K LW+++I +   +F W+L  + LPT   L   + +  D+TC FC+R  E+A H+F  C 
Sbjct: 1670 KDLWKIKIPSKFLMFAWRLLWDRLPTKANLRARQVQISDLTCPFCRRVEETASHMFIHCI 1729

Query: 214  WVKRLWFVSDAMLFVDGQPEWNVLDWLNEFLRWSGQKEDNLSRR--GYYCLQLLFEIWSC 387
              + +W+ +   + + G   W++ D    F+++S  KE  +  R   ++ + + + IW  
Sbjct: 1730 KTQPIWWETMNWINMQGPLPWSITD---HFMQFSSLKEAGIRSRRWQWWWMAVTWSIWQL 1786

Query: 388  RN 393
            RN
Sbjct: 1787 RN 1788


>ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [Sorghum bicolor]
            gi|241946107|gb|EES19252.1| hypothetical protein
            SORBIDRAFT_09g007400 [Sorghum bicolor]
          Length = 835

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
 Frame = +1

Query: 31   SLKKLWRLQIDAGTQLFLWKLYSNGLPTGDVLHKHKFKGDITCGFCQRSVESAHHLFFSC 210
            S  K+W+ +I A  ++FLW L +N + T D L K K+ GD TC FC +  ES  HLFF C
Sbjct: 653  SHSKIWKSKIPAKIKIFLWLLLNNVILTKDNLIKRKWIGDPTCYFCDQD-ESVSHLFFHC 711

Query: 211  SWVKRLWFVSDAMLFVDGQPEWNVLDWLNEFLRW------SGQKEDNLSRRGYYCLQLLF 372
            S  K +W +    +  +     N+ + LN+   W      +G++   L         + +
Sbjct: 712  STAKAVWAIVAHCIGAN-----NIPNTLNQCWTWCECWLPAGKQFHTLG-----IAAICW 761

Query: 373  EIWSCRNK 396
             IW  RNK
Sbjct: 762  AIWKTRNK 769


>ref|XP_003535019.1| PREDICTED: uncharacterized protein LOC100795609 [Glycine max]
          Length = 525

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
 Frame = +1

Query: 37  KKLWRLQIDAGTQLFLWKLYSNGLPTGDVLHKHKFK-GDITCGFCQRSVESAHHLFFSCS 213
           +KLWR+++ A   +F W+L  + LPT   L + + +  D  C  C+   E A HLFF CS
Sbjct: 352 EKLWRIKVPARFLVFAWRLLRDRLPTRKNLQRRQIQLTDSLCPLCRTQQEDASHLFFHCS 411

Query: 214 WVKRLWFVSDAMLFVDGQPEWNVLDWLNEFLRWSGQKEDNLSRRGYYC--LQLLFEIWSC 387
            V+ +W+ + + L V G      L     FL   G +   +    ++C  L L + IW  
Sbjct: 412 KVQPIWWETMSWLQVKGA---FPLSPQQHFLHHLGVQPAGVRNNRWHCWWLALTWSIWKL 468

Query: 388 RN 393
           RN
Sbjct: 469 RN 470


>ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804594 [Glycine max]
          Length = 4413

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
 Frame = +1

Query: 1    PPSSSSFNPISLKKLWRLQIDAGTQLFLWKLYSNGLPTGDVLHKHKFK-GDITCGFCQRS 177
            PPS+   +  + + LW L+I   + +F W+L+ + LPT   L K      D  C  C   
Sbjct: 1635 PPSNPLPSRRNFQILWHLKIPPRSAVFSWRLFWDRLPTRGNLSKRNIPIQDTMCPLCGCQ 1694

Query: 178  VESAHHLFFSCSWVKRLWFVSDAMLFVDGQPEWNVLDWLNEFLRWSGQKEDN---LSRRG 348
             E A HLFF+CS  K LW+ S   +   G    + ++   +F    G   ++   LSRR 
Sbjct: 1695 QEEAGHLFFNCSMTKGLWWESMGWIQAIGPFSADPVNHFIQFCEGFGVDRNSSRYLSRRA 1754

Query: 349  YYCLQLLFEIWSCRN 393
             + + L   IW  RN
Sbjct: 1755 GWWIALSITIWQHRN 1769


>ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799415 [Glycine max]
          Length = 3081

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
 Frame = +1

Query: 37   KKLWRLQIDAGTQLFLWKLYSNGLPTGDVLHKHKFK-GDITCGFCQRSVESAHHLFFSCS 213
            K LW+L+I     +F W+L  + LPT   L + +    D  C FC    E+A HLFF CS
Sbjct: 2430 KDLWKLKIPTKATIFAWRLIRDRLPTKSNLRRRQIDISDSLCPFCSIKDETASHLFFECS 2489

Query: 214  WVKRLWFVSDAMLFVDGQPEWNVLDWLNEFLRWS-GQKEDNLSRR-GYYCLQLLFEIWSC 387
             ++ LW+ S + +   G    N     + FL+ + G K   + +R   + + L + IW  
Sbjct: 2490 KIQHLWWESQSWIGTSGAYPINP---RHHFLQHNIGMKGGKIYKRWKCWWVALNWSIWQQ 2546

Query: 388  RNK 396
            RNK
Sbjct: 2547 RNK 2549


Top