BLASTX nr result

ID: Coptis21_contig00024450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024450
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002450450.1| hypothetical protein SORBIDRAFT_05g005680 [S...   163   4e-38
ref|XP_002451581.1| hypothetical protein SORBIDRAFT_04g004200 [S...   163   4e-38
ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic su...   162   7e-38
gb|AFW65465.1| hypothetical protein ZEAMMB73_774459 [Zea mays]        161   1e-37
ref|XP_003577757.1| PREDICTED: DNA polymerase delta catalytic su...   161   1e-37

>ref|XP_002450450.1| hypothetical protein SORBIDRAFT_05g005680 [Sorghum bicolor]
            gi|241936293|gb|EES09438.1| hypothetical protein
            SORBIDRAFT_05g005680 [Sorghum bicolor]
          Length = 1099

 Score =  163 bits (412), Expect = 4e-38
 Identities = 73/81 (90%), Positives = 78/81 (96%)
 Frame = +2

Query: 5    AEQTLCSHCKGREAELYCKTVANVADLEVLFGRLWTQCQECQESLHQDVLCTSRDCPIFY 184
            A QTLCSHCKGREAELYCKTVANV+DLE+LFGRLWTQCQECQ SLHQDVLCTSRDCPIFY
Sbjct: 1019 ASQTLCSHCKGREAELYCKTVANVSDLEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 1078

Query: 185  RRKKAQKDMAEAKVQLDRWQF 247
            RR+KAQKDMAEA++QLDRW F
Sbjct: 1079 RRRKAQKDMAEARLQLDRWDF 1099


>ref|XP_002451581.1| hypothetical protein SORBIDRAFT_04g004200 [Sorghum bicolor]
            gi|241931412|gb|EES04557.1| hypothetical protein
            SORBIDRAFT_04g004200 [Sorghum bicolor]
          Length = 1101

 Score =  163 bits (412), Expect = 4e-38
 Identities = 73/81 (90%), Positives = 78/81 (96%)
 Frame = +2

Query: 5    AEQTLCSHCKGREAELYCKTVANVADLEVLFGRLWTQCQECQESLHQDVLCTSRDCPIFY 184
            A QTLCSHCKGREAELYCKTVANV+DLE+LFGRLWTQCQECQ SLHQDVLCTSRDCPIFY
Sbjct: 1021 ASQTLCSHCKGREAELYCKTVANVSDLEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 1080

Query: 185  RRKKAQKDMAEAKVQLDRWQF 247
            RR+KAQKDMAEA++QLDRW F
Sbjct: 1081 RRRKAQKDMAEARLQLDRWDF 1101


>ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
            gi|296088521|emb|CBI37512.3| unnamed protein product
            [Vitis vinifera]
          Length = 1089

 Score =  162 bits (410), Expect = 7e-38
 Identities = 72/82 (87%), Positives = 79/82 (96%)
 Frame = +2

Query: 2    NAEQTLCSHCKGREAELYCKTVANVADLEVLFGRLWTQCQECQESLHQDVLCTSRDCPIF 181
            N ++TLCSHCKGREAELYCKTVANV++LE+LFGRLWTQCQECQ SLHQDVLCTSRDCPIF
Sbjct: 1008 NTDRTLCSHCKGREAELYCKTVANVSELEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIF 1067

Query: 182  YRRKKAQKDMAEAKVQLDRWQF 247
            YRRKKAQKDMAEAK+QL+RW F
Sbjct: 1068 YRRKKAQKDMAEAKLQLERWNF 1089


>gb|AFW65465.1| hypothetical protein ZEAMMB73_774459 [Zea mays]
          Length = 373

 Score =  161 bits (408), Expect = 1e-37
 Identities = 72/81 (88%), Positives = 77/81 (95%)
 Frame = +2

Query: 5   AEQTLCSHCKGREAELYCKTVANVADLEVLFGRLWTQCQECQESLHQDVLCTSRDCPIFY 184
           A QTLCSHCKGREAELYCKTVANV+DLE+LFGRLWTQCQECQ SLHQDVLCTSRDCPIFY
Sbjct: 293 ASQTLCSHCKGREAELYCKTVANVSDLEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFY 352

Query: 185 RRKKAQKDMAEAKVQLDRWQF 247
           RR+KAQKDM EA++QLDRW F
Sbjct: 353 RRRKAQKDMTEARLQLDRWDF 373


>ref|XP_003577757.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Brachypodium
            distachyon]
          Length = 1106

 Score =  161 bits (408), Expect = 1e-37
 Identities = 72/79 (91%), Positives = 77/79 (97%)
 Frame = +2

Query: 11   QTLCSHCKGREAELYCKTVANVADLEVLFGRLWTQCQECQESLHQDVLCTSRDCPIFYRR 190
            QTLCSHCKGREAELYCKTVANV+DLE+LFG+LWTQCQECQ SLHQDVLCTSRDCPIFYRR
Sbjct: 1028 QTLCSHCKGREAELYCKTVANVSDLEMLFGKLWTQCQECQGSLHQDVLCTSRDCPIFYRR 1087

Query: 191  KKAQKDMAEAKVQLDRWQF 247
            +KAQKDMAEA+VQLDRW F
Sbjct: 1088 RKAQKDMAEARVQLDRWDF 1106


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