BLASTX nr result

ID: Coptis21_contig00024448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024448
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263597.2| PREDICTED: AP2-like ethylene-responsive tran...   149   2e-34
emb|CBI41041.3| unnamed protein product [Vitis vinifera]              147   1e-33
ref|XP_002307311.1| AP2 domain-containing transcription factor [...   139   2e-31
ref|XP_002285467.2| PREDICTED: AP2-like ethylene-responsive tran...   135   3e-30
emb|CAN60401.1| hypothetical protein VITISV_034131 [Vitis vinifera]   135   3e-30

>ref|XP_002263597.2| PREDICTED: AP2-like ethylene-responsive transcription factor
           ANT-like [Vitis vinifera]
          Length = 653

 Score =  149 bits (376), Expect = 2e-34
 Identities = 74/102 (72%), Positives = 83/102 (81%), Gaps = 3/102 (2%)
 Frame = -2

Query: 297 HLNNSGICDGVDGENGGFYSHLSVMPLKSDGSLCIMEALSRSQPEGLVPSSSPKLEDFLG 118
           HLN SGI  GV+GENGGFYS LSVMPLKSDGSLCIMEALSRSQP+G+VP+S+PKLEDF G
Sbjct: 36  HLNYSGIYYGVEGENGGFYSPLSVMPLKSDGSLCIMEALSRSQPQGMVPTSTPKLEDFFG 95

Query: 117 GATMASHQYESSDRETME---DSIYYHHSSENENNRQRYLQQ 1
           GATM +H YES+DRE M    DS+YYH + ENE N Q  L Q
Sbjct: 96  GATMGTHHYESNDREAMALSLDSMYYHQNPENEPNSQNCLNQ 137


>emb|CBI41041.3| unnamed protein product [Vitis vinifera]
          Length = 533

 Score =  147 bits (370), Expect = 1e-33
 Identities = 72/101 (71%), Positives = 83/101 (82%), Gaps = 3/101 (2%)
 Frame = -2

Query: 297 HLNNSGICDGVDGENGGFYSHLSVMPLKSDGSLCIMEALSRSQPEGLVPSSSPKLEDFLG 118
           HLN SGI  GV+GENGGFYS LSVMPLKSDGSLCIMEALSRSQP+G+VP+S+PKLEDF G
Sbjct: 36  HLNYSGIYYGVEGENGGFYSPLSVMPLKSDGSLCIMEALSRSQPQGMVPTSTPKLEDFFG 95

Query: 117 GATMASHQYESSDRETME---DSIYYHHSSENENNRQRYLQ 4
           GATM +H YES+DRE M    DS+YYH + ENE N+ +  Q
Sbjct: 96  GATMGTHHYESNDREAMALSLDSMYYHQNPENEPNKTKETQ 136


>ref|XP_002307311.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222856760|gb|EEE94307.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 639

 Score =  139 bits (350), Expect = 2e-31
 Identities = 74/98 (75%), Positives = 79/98 (80%), Gaps = 3/98 (3%)
 Frame = -2

Query: 291 NNSGICDGVDGENGGFYSHLSVMPLKSDGSLCIMEALSRSQPEGLVPSSSPKLEDFLGGA 112
           N+SGIC GV GENGGF+S LSVMPLKSDGSLCIMEAL+RSQPEG+V S SPKLEDFLGGA
Sbjct: 43  NSSGICYGV-GENGGFHSPLSVMPLKSDGSLCIMEALTRSQPEGMVSSPSPKLEDFLGGA 101

Query: 111 TMASHQYESSDRETME---DSIYYHHSSENENNRQRYL 7
           TM SHQY S +RE M    DSIYY  SSE E NRQ  L
Sbjct: 102 TMESHQYSSHEREAMALSLDSIYYQQSSEPETNRQHSL 139


>ref|XP_002285467.2| PREDICTED: AP2-like ethylene-responsive transcription factor
           ANT-like [Vitis vinifera]
          Length = 674

 Score =  135 bits (340), Expect = 3e-30
 Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 6/106 (5%)
 Frame = -2

Query: 306 SFF---HLNNSGICDGVDGENGGFYSHLSVMPLKSDGSLCIMEALSRSQPEGLVPSSSPK 136
           SFF   HLN+S I  GV GENG F+SHLSVMPLKSDGSLCIMEALSRSQ EG+VP+SSPK
Sbjct: 52  SFFLSPHLNSSAIYYGV-GENGAFHSHLSVMPLKSDGSLCIMEALSRSQQEGMVPTSSPK 110

Query: 135 LEDFLGGATMASHQYESSDRETME---DSIYYHHSSENENNRQRYL 7
           LEDFLG ATMA+HQY   +RE M    DS+YYH ++E E +RQ  L
Sbjct: 111 LEDFLGSATMATHQYGGHEREAMALSLDSMYYHQNAEPETSRQHSL 156


>emb|CAN60401.1| hypothetical protein VITISV_034131 [Vitis vinifera]
          Length = 629

 Score =  135 bits (340), Expect = 3e-30
 Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 6/106 (5%)
 Frame = -2

Query: 306 SFF---HLNNSGICDGVDGENGGFYSHLSVMPLKSDGSLCIMEALSRSQPEGLVPSSSPK 136
           SFF   HLN+S I  GV GENG F+SHLSVMPLKSDGSLCIMEALSRSQ EG+VP+SSPK
Sbjct: 27  SFFLSPHLNSSAIYYGV-GENGAFHSHLSVMPLKSDGSLCIMEALSRSQQEGMVPTSSPK 85

Query: 135 LEDFLGGATMASHQYESSDRETME---DSIYYHHSSENENNRQRYL 7
           LEDFLG ATMA+HQY   +RE M    DS+YYH ++E E +RQ  L
Sbjct: 86  LEDFLGSATMATHQYGGHEREAMALSLDSMYYHQNAEPETSRQHSL 131


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