BLASTX nr result

ID: Coptis21_contig00024442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024442
         (1261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327653.1| histidine kinase osmosensor protein [Populus...   308   2e-81
ref|XP_003519860.1| PREDICTED: histidine kinase 1-like [Glycine ...   278   7e-81
ref|XP_002265248.1| PREDICTED: histidine kinase 1-like [Vitis vi...   295   2e-77
emb|CAI78447.1| osmosensor histidine-aspartate kinase [Populus x...   295   2e-77
gb|AAQ10680.2| cold inducible histidine kinase 1 [Catharanthus r...   258   1e-74

>ref|XP_002327653.1| histidine kinase osmosensor protein [Populus trichocarpa]
            gi|222836738|gb|EEE75131.1| histidine kinase osmosensor
            protein [Populus trichocarpa]
          Length = 1258

 Score =  308 bits (789), Expect = 2e-81
 Identities = 190/370 (51%), Positives = 230/370 (62%), Gaps = 14/370 (3%)
 Frame = +1

Query: 55   SWEGKVCMGTNHDTCNAFKMELRKNGHLLMVNKPLYKTKLVQILDAVVKERNLVLQRKGV 234
            S + K     NHDT NA KMELRK GHLLMVNKPLYK K++ IL+ V+KE++L  Q+K  
Sbjct: 898  SGKAKFAWMLNHDTSNAIKMELRKKGHLLMVNKPLYKAKMIHILETVIKEKDLENQKKSS 957

Query: 235  NTSRTSTLERDLHECLEIDPFHY-XXXXXXXXXXXXGRSLHLNGSAVVGERRMKNST--- 402
            N +R +T + D+HECLEID  H+             G+S   N  ++   R  +  T   
Sbjct: 958  NATRATTKDIDMHECLEIDSTHFDTASSEESDTAEMGKS---NSPSIFHLREKQKETEKI 1014

Query: 403  ---TRCNGLNNGLVEL------SRTVGFPGKSLNPENQYRKTD-VNNGNLLHHSDGGKIS 552
               ++C      LVEL      +R      +   P  QY K   V N      +     S
Sbjct: 1015 ATESQCQSFKKCLVELADVDAEAREDPCQIRPNLPSTQYGKDMLVCNKQAPFSTATQNES 1074

Query: 553  ALSESRCGSSIISQHQRINNDLMDQNHIDTNRLVSRQKSLEGLCILLAEDTPVLQRVATI 732
            +  E R   S  S H+       +Q +  +++  ++QK+L+GL ILLAEDTPVLQRVATI
Sbjct: 1075 SKHEERISES--SSHK-------EQGNSYSSKAGNQQKALDGLRILLAEDTPVLQRVATI 1125

Query: 733  MLEKMGAMVVVVGDGQQAVEALKCTLDAECRKRALYPEDGEVMPHMQIQEFPAFHLILMD 912
            MLEKMGA V+ VGDG QAVEAL C L  +  KR    +DGE      IQE P + LILMD
Sbjct: 1126 MLEKMGAKVIAVGDGLQAVEALNCVLSEKDLKRESPGDDGERGLQTDIQESPPYDLILMD 1185

Query: 913  CQMPRMDGYEATKAIRKLEEGTGFHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPINCKL 1092
            CQMP+MDGYEATKAIRK E GTGFHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPI+ KL
Sbjct: 1186 CQMPKMDGYEATKAIRKSEAGTGFHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPIDYKL 1245

Query: 1093 MMSTILSLTK 1122
            M+STILSLTK
Sbjct: 1246 MVSTILSLTK 1255


>ref|XP_003519860.1| PREDICTED: histidine kinase 1-like [Glycine max]
          Length = 1193

 Score =  278 bits (712), Expect(2) = 7e-81
 Identities = 167/351 (47%), Positives = 212/351 (60%), Gaps = 4/351 (1%)
 Frame = +1

Query: 85   NHDTCNAFKMELRKNGHLLMVNKPLYKTKLVQILDAVVKERNLVLQRKGVNTSRTSTLER 264
            NHD+ N  KM+L + GH L VNKPLYKTK++ IL++++K+RN  LQ+K + T R +  E 
Sbjct: 882  NHDSSNTMKMDLCRKGHTLTVNKPLYKTKMIHILESIIKDRNEELQKKNMTTLRATVKEG 941

Query: 265  DLHECLEIDPFHYXXXXXXXXXXXXGRSLHLNGSAVVGERRMKNSTTRCNGLNNGLVELS 444
            +LHE LEID                                     T+C+  ++   ++S
Sbjct: 942  NLHESLEID------------------------------------YTQCDVASSDGSDIS 965

Query: 445  RTVGFPGKSLNPENQYRK---TDVNNGNLLHHSDGGKISALSESRCGSSIISQHQRINND 615
             T G    S   + Q  K   +D ++ + +++  G     + +       + Q    +ND
Sbjct: 966  ETGGSNPVSARGDKQREKVVRSDPSSQHQINNLVGLTNECMEDDNHRKEELCQSSLNSND 1025

Query: 616  LMDQNHIDTNRLVSRQKSLEGLCILLAEDTPVLQRVATIMLEKMGAMVVVVGDGQQAVEA 795
                    ++R VS +KSLEGL ILLAEDTPV+QRVATIMLEKMGA+VV VGDG+QAV+A
Sbjct: 1026 ASS-----SSRAVSGKKSLEGLRILLAEDTPVIQRVATIMLEKMGAIVVAVGDGRQAVDA 1080

Query: 796  LKCTLDAE-CRKRALYPEDGEVMPHMQIQEFPAFHLILMDCQMPRMDGYEATKAIRKLEE 972
            L      E CR+  L  E        +I   P + LILMDCQMP+MDGYEATKAIRK EE
Sbjct: 1081 LNGMSGVEDCRRETLLKERNTRSSQTEILSCPPYDLILMDCQMPKMDGYEATKAIRKSEE 1140

Query: 973  GTGFHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPINCKLMMSTILSLTKG 1125
            GTG HIPIVALTAHAMS DEAKCLEVGMDAYLTKPI+ KLM STILSLT+G
Sbjct: 1141 GTGLHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKLMESTILSLTRG 1191



 Score = 50.1 bits (118), Expect(2) = 7e-81
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +2

Query: 2   LDLSTSIWKEQLKFLDKYHGKAKFAWVL 85
           LDLST IWKEQL FL KY G+AKF W+L
Sbjct: 854 LDLSTDIWKEQLNFLHKYFGRAKFVWIL 881


>ref|XP_002265248.1| PREDICTED: histidine kinase 1-like [Vitis vinifera]
          Length = 1235

 Score =  295 bits (755), Expect = 2e-77
 Identities = 176/353 (49%), Positives = 222/353 (62%), Gaps = 7/353 (1%)
 Frame = +1

Query: 85   NHDTCNAFKMELRKNGHLLMVNKPLYKTKLVQILDAVVKERNLVLQRKGVNTSRTSTLER 264
            NHDT N  KMELR+ GHLLMVNKPLYK+K+V IL+AV+K R+L +Q + +N  +++ +E 
Sbjct: 880  NHDTSNFIKMELRRKGHLLMVNKPLYKSKVVHILEAVIKGRDLEMQGRILNGLKSTRIEG 939

Query: 265  DLHECLEIDPFHYXXXXXXXXXXXXGRSLHLNGSAV-VGERRMKNSTTRCNG----LNNG 429
            +LHE LEID  H+                H + +A  + E++       C       N+ 
Sbjct: 940  NLHESLEIDSTHFEEVPSSDDSDRSEMGSHKSINAYHIAEKQKDRIRKPCPSQYQTANSC 999

Query: 430  LVELSRTVGFPGKSLNPE-NQYRKTDVNNGNLLHHSDGGK-ISALSESRCGSSIISQHQR 603
            LVE ++           + +Q R    + GN  H     K  S L+E+ C +    +   
Sbjct: 1000 LVEFTQVYSTENNLRTEDPHQIRPNSHDAGNEGHKLMCNKSTSPLTEAECENCRGQEQHL 1059

Query: 604  INNDLMDQNHIDTNRLVSRQKSLEGLCILLAEDTPVLQRVATIMLEKMGAMVVVVGDGQQ 783
            I+    +  +  + + V+ QKSLEGL ILLAEDTPVLQRVATIMLEKMGA V+ VGDG Q
Sbjct: 1060 ISTCPKEHGNSYSGKTVNGQKSLEGLRILLAEDTPVLQRVATIMLEKMGATVIAVGDGLQ 1119

Query: 784  AVEALKCTLDAECRKRALYPEDGEVMPHMQIQEFPAFHLILMDCQMPRMDGYEATKAIRK 963
            AV+ALKC   AE  +     +DG      QI +   + LILMDCQMP+MDGYEATK IRK
Sbjct: 1120 AVDALKCMPGAEESRGKCLLQDGRTRCQTQIHDSLPYDLILMDCQMPKMDGYEATKTIRK 1179

Query: 964  LEEGTGFHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPINCKLMMSTILSLTK 1122
             EEGT  HIPIVALTAHAMSSDEAKCLEVGMDAYLTKPI+ +LM+STILSLTK
Sbjct: 1180 SEEGTSLHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPIDYRLMVSTILSLTK 1232


>emb|CAI78447.1| osmosensor histidine-aspartate kinase [Populus x canadensis]
          Length = 1249

 Score =  295 bits (754), Expect = 2e-77
 Identities = 173/360 (48%), Positives = 217/360 (60%), Gaps = 4/360 (1%)
 Frame = +1

Query: 55   SWEGKVCMGTNHDTCNAFKMELRKNGHLLMVNKPLYKTKLVQILDAVVKERNLVLQRKGV 234
            S + K     NHDT NA KMELRK GHLLMVNKPLYK K++ IL+ V+KE++L  Q+K  
Sbjct: 890  SGKAKFAWMLNHDTSNAIKMELRKKGHLLMVNKPLYKAKMIHILETVIKEKDLEYQKKSS 949

Query: 235  NTSRTSTLERDLHECLEIDPFHYXXXXXXXXXXXXGRSLHLNGSAVVGERRMKNSTTRCN 414
            N +R    + D+HECLEID  H+                +   +  + + R +     C 
Sbjct: 950  NAARAMAKDGDMHECLEIDSTHFDTTSSEESDTAEMGDSNSPSTFHLRDVRKEREEIACQ 1009

Query: 415  GLNNGLVELSRTVGFPGKSLNPENQYRK----TDVNNGNLLHHSDGGKISALSESRCGSS 582
                    L        ++     Q R     T   N  LL +    ++   + +R  SS
Sbjct: 1010 SQCQTFKCLIELADADAEAREDPGQNRPNLQGTQYGNDMLLCNK---QVPFSTATRNESS 1066

Query: 583  IISQHQRINNDLMDQNHIDTNRLVSRQKSLEGLCILLAEDTPVLQRVATIMLEKMGAMVV 762
               +     +   +Q +  +N+  ++QK+L+GL ILLAEDTPVLQRVATIMLEKMGA V+
Sbjct: 1067 KHDERNSETSSHKEQGNSYSNKAGNQQKALDGLRILLAEDTPVLQRVATIMLEKMGAKVI 1126

Query: 763  VVGDGQQAVEALKCTLDAECRKRALYPEDGEVMPHMQIQEFPAFHLILMDCQMPRMDGYE 942
             VGDG QAVEAL C+L  +  +R     DG       IQE  ++ LILMDCQMP+MDGYE
Sbjct: 1127 TVGDGLQAVEALNCSLSEKDCRRESPGNDGNTGLQTDIQESQSYDLILMDCQMPKMDGYE 1186

Query: 943  ATKAIRKLEEGTGFHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPINCKLMMSTILSLTK 1122
            ATKAIRK E GT  HIPIVALTAHAMSSDEAKCLEVGMDAYLTKPI+ KLM+STILSLT+
Sbjct: 1187 ATKAIRKSETGTDLHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPIDYKLMVSTILSLTR 1246


>gb|AAQ10680.2| cold inducible histidine kinase 1 [Catharanthus roseus]
          Length = 1205

 Score =  258 bits (659), Expect(2) = 1e-74
 Identities = 167/355 (47%), Positives = 210/355 (59%), Gaps = 4/355 (1%)
 Frame = +1

Query: 85   NHDTCNAFKMELRKNGHLLMVNKPLYKTKLVQILDAVVKERNLVLQRKGVNTSRTSTLER 264
            NHDT N  K ELR+ GHLLM+N+P+Y  KL+ I +AV+K++N+ LQ K +NT + +  E 
Sbjct: 886  NHDTSNTIKSELRQRGHLLMINRPIYMAKLIHIFEAVMKDQNVELQ-KYMNTLKATAAEG 944

Query: 265  DLHECLEIDPFHYXXXXXXXXXXXXGRSLHLNGSAVVGERRMKN----STTRCNGLNNGL 432
             L EC EID   +              +         GE+  +     S  +   LNN  
Sbjct: 945  YLSECHEIDVIPFCAASSDDSDKSERENSSSVSPVQAGEKTYEKFHIASACQNRTLNNYF 1004

Query: 433  VELSRTVGFPGKSLNPENQYRKTDVNNGNLLHHSDGGKISALSESRCGSSIISQHQRINN 612
            VE      FP  +L  EN +   D+ N           +    E    SS+ S+      
Sbjct: 1005 VE------FPQSNLE-ENSF---DMRNRG---------VKGPRERHKNSSVNSK------ 1039

Query: 613  DLMDQNHIDTNRLVSRQKSLEGLCILLAEDTPVLQRVATIMLEKMGAMVVVVGDGQQAVE 792
               D++      L + QKSL+GL ILLAEDTPVLQRVATIMLEK+GA VV VGDG QAV+
Sbjct: 1040 ---DRDTQSNGTLWNEQKSLDGLRILLAEDTPVLQRVATIMLEKLGAKVVAVGDGLQAVD 1096

Query: 793  ALKCTLDAECRKRALYPEDGEVMPHMQIQEFPAFHLILMDCQMPRMDGYEATKAIRKLEE 972
            AL+   D+   +  L   + +V+    +     +HLILMDCQMP+MDGY ATKAIRK E 
Sbjct: 1097 ALRFMFDS--NQSNLESPEEDVINSTSL----PYHLILMDCQMPKMDGYAATKAIRKSEM 1150

Query: 973  GTGFHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPINCKLMMSTILSLTKGVV*H 1137
            GTG HIPIVALTAHAMSSDEAKCLEVGMDAYLTKPI+ KLM+STILSLT+ +  H
Sbjct: 1151 GTGLHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPIDRKLMVSTILSLTRRIPQH 1205



 Score = 49.7 bits (117), Expect(2) = 1e-74
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = +2

Query: 2   LDLSTSIWKEQLKFLDKYHGKAKFAWVL 85
           LDL T IWKEQL +LD+Y G+AKFAW+L
Sbjct: 858 LDLRTDIWKEQLSYLDEYFGRAKFAWIL 885


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