BLASTX nr result

ID: Coptis21_contig00024432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024432
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_194449.1| NB-ARC domain-containing disease resistance pro...    56   3e-06
gb|AFC90238.1| nucleotide-binding site leucine-rich repeat prote...    55   5e-06
ref|XP_002867519.1| hypothetical protein ARALYDRAFT_492076 [Arab...    55   5e-06

>ref|NP_194449.1| NB-ARC domain-containing disease resistance protein [Arabidopsis
           thaliana] gi|46396029|sp|Q9T048.1|DRL27_ARATH RecName:
           Full=Disease resistance protein At4g27190
           gi|4490715|emb|CAB38849.1| putative protein [Arabidopsis
           thaliana] gi|7269572|emb|CAB79574.1| putative protein
           [Arabidopsis thaliana] gi|91806730|gb|ABE66092.1|
           disease resistance protein [Arabidopsis thaliana]
           gi|332659911|gb|AEE85311.1| NB-ARC domain-containing
           disease resistance protein [Arabidopsis thaliana]
          Length = 985

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/61 (44%), Positives = 42/61 (68%)
 Frame = +2

Query: 20  AEECKGLPIALVTLGRAMRDNLDRDVWQNVLLQLRGSDFDAIKDIDARVFKPIKLSYKFT 199
           ++EC GLP+A++T+G AMR   +  +W +VL +L  S    IK I+ ++F+P+KLSY F 
Sbjct: 332 SQECGGLPLAIITVGTAMRGKKNVKLWNHVLSKLSKS-VPWIKSIEEKIFQPLKLSYDFL 390

Query: 200 E 202
           E
Sbjct: 391 E 391


>gb|AFC90238.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 291

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/61 (42%), Positives = 41/61 (67%)
 Frame = +2

Query: 20  AEECKGLPIALVTLGRAMRDNLDRDVWQNVLLQLRGSDFDAIKDIDARVFKPIKLSYKFT 199
           A EC+GLPIA+VT+GRA++   D   W++ L QL  S+   I+ ++  VF+P++ SY + 
Sbjct: 156 ANECRGLPIAIVTVGRALKGK-DEPSWRSALAQLCKSNGKNIRGVEENVFRPLEWSYNYL 214

Query: 200 E 202
           E
Sbjct: 215 E 215


>ref|XP_002867519.1| hypothetical protein ARALYDRAFT_492076 [Arabidopsis lyrata subsp.
           lyrata] gi|297313355|gb|EFH43778.1| hypothetical protein
           ARALYDRAFT_492076 [Arabidopsis lyrata subsp. lyrata]
          Length = 955

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/59 (45%), Positives = 41/59 (69%)
 Frame = +2

Query: 26  ECKGLPIALVTLGRAMRDNLDRDVWQNVLLQLRGSDFDAIKDIDARVFKPIKLSYKFTE 202
           EC GLP+A++T+G AMR + +  +W +VL +L  S    IK I+ ++F+P+KLSY F E
Sbjct: 310 ECGGLPLAIITVGTAMRGSKNVKLWNHVLSKLSKS-VPWIKSIEEKIFQPLKLSYDFLE 367


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