BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024401
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322749.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containi...    82   4e-14
ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_002517927.1| pentatricopeptide repeat-containing protein,...    79   3e-13

>ref|XP_002322749.1| predicted protein [Populus trichocarpa] gi|222867379|gb|EEF04510.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 39/69 (56%), Positives = 54/69 (78%)
 Frame = +3

Query: 3   EMKENGVRADKFTMSIQMAAYAANSNIDGMEKILQSMEVNPEIIMDWKSYATAAKGYIEV 182
           EM++NG+  DKF  SIQ++AYA+ S+I G+EK L  ME +P + +DW SY  AAKGYI+V
Sbjct: 220 EMEQNGIGCDKFAHSIQLSAYASVSDIVGIEKTLAKMESDPNVFLDWTSYTAAAKGYIKV 279

Query: 183 GLMEKALQM 209
           GL++KAL+M
Sbjct: 280 GLVDKALEM 288


>ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 37/69 (53%), Positives = 53/69 (76%)
 Frame = +3

Query: 3   EMKENGVRADKFTMSIQMAAYAANSNIDGMEKILQSMEVNPEIIMDWKSYATAAKGYIEV 182
           EM+E G+  DKFT++I+++AYAA SNI G++ I+  ME +P II+DW SYA  A GY++V
Sbjct: 209 EMEEKGIFCDKFTLAIRLSAYAAASNIVGIDNIVTRMESDPRIILDWNSYAVVAHGYLKV 268

Query: 183 GLMEKALQM 209
           GL++K L M
Sbjct: 269 GLVDKTLVM 277


>ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|222867380|gb|EEF04511.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 34/69 (49%), Positives = 54/69 (78%)
 Frame = +3

Query: 3   EMKENGVRADKFTMSIQMAAYAANSNIDGMEKILQSMEVNPEIIMDWKSYATAAKGYIEV 182
           EM+ENG+  DKF   I++++YAA S+ +G+EK L+ +E +P +++DW +YAT A GY +V
Sbjct: 207 EMEENGISFDKFAYCIRLSSYAAASDSEGLEKTLKRIESDPNVVLDWATYATVANGYSKV 266

Query: 183 GLMEKALQM 209
           GL++KAL+M
Sbjct: 267 GLLDKALEM 275


>ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 461

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/69 (52%), Positives = 51/69 (73%)
 Frame = +3

Query: 3   EMKENGVRADKFTMSIQMAAYAANSNIDGMEKILQSMEVNPEIIMDWKSYATAAKGYIEV 182
           EMKE GV  D+FT SI+++AYAA S+  G+EKI++ ME NP I++DW  Y  AA  Y +V
Sbjct: 190 EMKERGVYYDRFTYSIRISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAYNKV 249

Query: 183 GLMEKALQM 209
           GL++K++ M
Sbjct: 250 GLIDKSISM 258


>ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542909|gb|EEF44445.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/69 (52%), Positives = 52/69 (75%)
 Frame = +3

Query: 3   EMKENGVRADKFTMSIQMAAYAANSNIDGMEKILQSMEVNPEIIMDWKSYATAAKGYIEV 182
           EM+ NG+  DK+TM   MAAY A S+I GME+IL  +E +P++   W++Y+ AA GY++V
Sbjct: 209 EMERNGIPQDKYTMRNLMAAYVAASDISGMERILNQLETHPQLGHGWQAYSVAASGYLKV 268

Query: 183 GLMEKALQM 209
           GL+EKAL+M
Sbjct: 269 GLIEKALKM 277