BLASTX nr result

ID: Coptis21_contig00024389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024389
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36388.3| unnamed protein product [Vitis vinifera]              189   3e-46
ref|XP_002268914.2| PREDICTED: LRR receptor-like serine/threonin...   189   4e-46
ref|XP_003632821.1| PREDICTED: receptor-like protein 12-like [Vi...   187   1e-45
emb|CBI38971.3| unnamed protein product [Vitis vinifera]              187   2e-45
ref|XP_003632819.1| PREDICTED: probable LRR receptor-like serine...   186   3e-45

>emb|CBI36388.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  189 bits (480), Expect = 3e-46
 Identities = 91/171 (53%), Positives = 124/171 (72%), Gaps = 2/171 (1%)
 Frame = +3

Query: 3   LSHNQLTGSIPKTLSNMKQLESMDLSHNSLSGEIPSELIDITYLAVFLVAYNNLSGRVPD 182
           LSHNQL GSIPK+ SN+ Q+ES+DLS+N L GEIP EL+++ +LAVF VAYNN+SGRVPD
Sbjct: 346 LSHNQLNGSIPKSFSNLSQIESLDLSYNKLGGEIPLELVELNFLAVFSVAYNNISGRVPD 405

Query: 183 MKAQFSTFGETSYEGNPFLCGPAVQKQCNEGNTVSGTPTVAKSSEKS--GIDPISFLASF 356
            KAQF+TF E+SYEGNPFLCG  ++++CN     S  P+ +  SE     I+ + F ASF
Sbjct: 406 AKAQFATFDESSYEGNPFLCGELLKRKCNTCIESSCAPSQSFESEAKWYDINHVVFFASF 465

Query: 357 SAAYVISLLAFVIVLYINPYWRRIWFDFIDSCLSFMFPFWSEAIYR*SNWL 509
           + +Y++ LL FV +LYINPYWR  WF+FI+ C+   + F  ++  + S +L
Sbjct: 466 TTSYIMILLGFVTILYINPYWRHRWFNFIEECIYSCYYFVFDSFSKLSAYL 516



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/59 (40%), Positives = 42/59 (71%)
 Frame = +3

Query: 3   LSHNQLTGSIPKTLSNMKQLESMDLSHNSLSGEIPSELIDITYLAVFLVAYNNLSGRVP 179
           L +NQLTG++   +S   +LE +D+S+N +SGEIPS++ ++TYL   ++  N+  G++P
Sbjct: 187 LGNNQLTGTLSNVISISSELEVLDVSNNYMSGEIPSQIGNMTYLTTLVLGNNSFKGKLP 245


>ref|XP_002268914.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            FLS2-like [Vitis vinifera]
          Length = 1027

 Score =  189 bits (479), Expect = 4e-46
 Identities = 89/171 (52%), Positives = 123/171 (71%), Gaps = 2/171 (1%)
 Frame = +3

Query: 3    LSHNQLTGSIPKTLSNMKQLESMDLSHNSLSGEIPSELIDITYLAVFLVAYNNLSGRVPD 182
            LSHNQL GSIPK+ SN+ Q+ES+DLS+N L GEIP EL+++ +L VF VAYNN+SGRVPD
Sbjct: 855  LSHNQLNGSIPKSFSNLSQIESLDLSYNKLGGEIPLELVELNFLEVFSVAYNNISGRVPD 914

Query: 183  MKAQFSTFGETSYEGNPFLCGPAVQKQCNEGNTVSGTPTVAKSSEKS--GIDPISFLASF 356
             KAQF+TF E++YEGNPFLCG  ++++CN        P+ +  SE     I+ + F ASF
Sbjct: 915  TKAQFATFDESNYEGNPFLCGELLKRKCNTSIESPCAPSQSFESEAKWYDINHVVFFASF 974

Query: 357  SAAYVISLLAFVIVLYINPYWRRIWFDFIDSCLSFMFPFWSEAIYR*SNWL 509
            + +Y+I LL F  +LYINPYWR  WF+FI+ C+   + F S+++ + S +L
Sbjct: 975  TTSYIIILLGFATILYINPYWRHRWFNFIEECIYSCYYFVSDSLSKLSTYL 1025


>ref|XP_003632821.1| PREDICTED: receptor-like protein 12-like [Vitis vinifera]
          Length = 1097

 Score =  187 bits (475), Expect = 1e-45
 Identities = 90/171 (52%), Positives = 121/171 (70%), Gaps = 2/171 (1%)
 Frame = +3

Query: 3    LSHNQLTGSIPKTLSNMKQLESMDLSHNSLSGEIPSELIDITYLAVFLVAYNNLSGRVPD 182
            LSHNQL GSIPK+ SN+ Q+ES+DLS+N L GEIP EL+++ +L VF VAYNN SGRVPD
Sbjct: 925  LSHNQLNGSIPKSFSNLSQIESLDLSYNKLGGEIPLELVELNFLEVFSVAYNNFSGRVPD 984

Query: 183  MKAQFSTFGETSYEGNPFLCGPAVQKQCNEGNTVSGTPTVAKSSEKS--GIDPISFLASF 356
             KAQF TF E SYEGNPFLCG  ++++CN        P+ +  SE     I+ + F ASF
Sbjct: 985  TKAQFGTFDERSYEGNPFLCGELLKRKCNTSIESPCAPSQSFESEAKWYDINHVVFFASF 1044

Query: 357  SAAYVISLLAFVIVLYINPYWRRIWFDFIDSCLSFMFPFWSEAIYR*SNWL 509
            + +Y++ LL FVI+LYINPYWR  WF+FI+ C+   + F  +++ + S +L
Sbjct: 1045 TTSYIMILLGFVIILYINPYWRHRWFNFIEECIYSCYYFVFDSLSKLSAYL 1095


>emb|CBI38971.3| unnamed protein product [Vitis vinifera]
          Length = 1193

 Score =  187 bits (474), Expect = 2e-45
 Identities = 87/160 (54%), Positives = 115/160 (71%), Gaps = 3/160 (1%)
 Frame = +3

Query: 3    LSHNQLTGSIPKTLSNMKQLESMDLSHNSLSGEIPSELIDITYLAVFLVAYNNLSGRVPD 182
            LSHNQL GS+PK+ S + Q+ES+DLS+N LSGEIP E I + +L VF VA+NN+SGRVPD
Sbjct: 712  LSHNQLKGSVPKSFSKLSQIESLDLSYNKLSGEIPPEFIGLNFLEVFNVAHNNISGRVPD 771

Query: 183  MKAQFSTFGETSYEGNPFLCGPAVQKQCN---EGNTVSGTPTVAKSSEKSGIDPISFLAS 353
            MK QF TFGE+SYE NPFLCGP ++++CN   E       P+    ++   ID + F AS
Sbjct: 772  MKEQFGTFGESSYEDNPFLCGPMLKRKCNTSIESPNSPSQPSQESEAKWYDIDHVVFFAS 831

Query: 354  FSAAYVISLLAFVIVLYINPYWRRIWFDFIDSCLSFMFPF 473
            F A+Y++ LL F  +LYINPYWR+ WF+FI+ C+ F + F
Sbjct: 832  FVASYIMILLGFAAILYINPYWRQRWFNFIEECIYFRYYF 871


>ref|XP_003632819.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At4g36180-like [Vitis vinifera]
          Length = 918

 Score =  186 bits (472), Expect = 3e-45
 Identities = 88/171 (51%), Positives = 123/171 (71%), Gaps = 2/171 (1%)
 Frame = +3

Query: 3    LSHNQLTGSIPKTLSNMKQLESMDLSHNSLSGEIPSELIDITYLAVFLVAYNNLSGRVPD 182
            LSHNQL GSIPK+ SN+ Q+ES+DLS+N L GEIP EL+++ +L VF VAYNN+SGRVP+
Sbjct: 746  LSHNQLNGSIPKSFSNLSQIESLDLSYNKLGGEIPLELVELNFLEVFSVAYNNISGRVPN 805

Query: 183  MKAQFSTFGETSYEGNPFLCGPAVQKQCNEGNTVSGTPTVAKSSEKS--GIDPISFLASF 356
             KAQF TF E++YEGNPFLCG  ++++CN        P+ +  SE     I+ + F ASF
Sbjct: 806  TKAQFGTFDESNYEGNPFLCGELLKRKCNTSIESPCAPSQSFKSEAKWYDINHVVFFASF 865

Query: 357  SAAYVISLLAFVIVLYINPYWRRIWFDFIDSCLSFMFPFWSEAIYR*SNWL 509
            + +Y++ LL FV +LYINPYWR  WF+FI+ C+   + F S+++ + S +L
Sbjct: 866  TTSYIMILLGFVTMLYINPYWRHRWFNFIEECIYSYYYFASDSLSKLSTYL 916


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