BLASTX nr result

ID: Coptis21_contig00024381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024381
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320774.1| predicted protein [Populus trichocarpa] gi|2...   116   5e-24
gb|AFD97530.1| BAP1 [Vitis vinifera]                                  108   1e-21
ref|XP_002271138.1| PREDICTED: BON1-associated protein 2-like [V...   108   2e-21
emb|CAN72571.1| hypothetical protein VITISV_017490 [Vitis vinifera]   106   7e-21
ref|XP_002511807.1| conserved hypothetical protein [Ricinus comm...   105   2e-20

>ref|XP_002320774.1| predicted protein [Populus trichocarpa] gi|222861547|gb|EEE99089.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  116 bits (291), Expect = 5e-24
 Identities = 62/132 (46%), Positives = 82/132 (62%)
 Frame = +2

Query: 8   EGASYPSWNEKLELALPSYVKHIRVDVKCKTSSGERTIGSANIPLTDFLDDYIPPNCLHF 187
           EG S PSWNEKL L +P   + I ++VKCKTSSG+R IG+A++P++D L DY P N LHF
Sbjct: 52  EGGSNPSWNEKLTLDIPFQTRFISLEVKCKTSSGDRVIGTASLPISDILGDYTPENHLHF 111

Query: 188 LSYRLREHDGDRNGIVNISIRLNAPDYVPRALPTLTVQAGYRNSNACGWMPSSGFQTPYN 367
           LSYRLR+  G RNG++N+S R+  P  V    P+ T        N  G+  SS +Q P  
Sbjct: 112 LSYRLRDSSGGRNGVINVSARVKMP--VDSVCPSAT-------KNPSGYGCSSSWQQP-- 160

Query: 368 NSRGSFAIGIPV 403
                 A+G+PV
Sbjct: 161 ------ALGVPV 166


>gb|AFD97530.1| BAP1 [Vitis vinifera]
          Length = 176

 Score =  108 bits (271), Expect = 1e-21
 Identities = 48/89 (53%), Positives = 67/89 (75%)
 Frame = +2

Query: 5   TEGASYPSWNEKLELALPSYVKHIRVDVKCKTSSGERTIGSANIPLTDFLDDYIPPNCLH 184
           TEG SY +WNEKL + LP++ + + V+V CKTSSG+R IG+A +P++DF     P + LH
Sbjct: 48  TEGGSYSTWNEKLVMNLPAHARFLTVEVHCKTSSGDRVIGTARVPVSDFSGGSTPESYLH 107

Query: 185 FLSYRLREHDGDRNGIVNISIRLNAPDYV 271
           FLSYRLR+  G+RNGIVN+S+R+  P+ V
Sbjct: 108 FLSYRLRDDKGERNGIVNLSVRMKVPERV 136


>ref|XP_002271138.1| PREDICTED: BON1-associated protein 2-like [Vitis vinifera]
          Length = 176

 Score =  108 bits (269), Expect = 2e-21
 Identities = 47/87 (54%), Positives = 66/87 (75%)
 Frame = +2

Query: 5   TEGASYPSWNEKLELALPSYVKHIRVDVKCKTSSGERTIGSANIPLTDFLDDYIPPNCLH 184
           TEG SY +WNEKL + LP++ + + V+V CKTSSG+R IG+A +P++DF     P + LH
Sbjct: 48  TEGGSYSTWNEKLVMNLPAHARFLTVEVHCKTSSGDRVIGTARVPVSDFSGGSTPESYLH 107

Query: 185 FLSYRLREHDGDRNGIVNISIRLNAPD 265
           FLSYRLR+  G+RNGIVN+S+R+  P+
Sbjct: 108 FLSYRLRDDKGERNGIVNLSVRMKVPE 134


>emb|CAN72571.1| hypothetical protein VITISV_017490 [Vitis vinifera]
          Length = 176

 Score =  106 bits (264), Expect = 7e-21
 Identities = 46/87 (52%), Positives = 65/87 (74%)
 Frame = +2

Query: 5   TEGASYPSWNEKLELALPSYVKHIRVDVKCKTSSGERTIGSANIPLTDFLDDYIPPNCLH 184
           TEG SY +WNEKL + LP++ + + V+V CKTSSG+R IG+A +P++DF     P +  H
Sbjct: 48  TEGGSYSTWNEKLVMNLPAHARFLTVEVHCKTSSGDRVIGTARVPVSDFSGGSTPESYXH 107

Query: 185 FLSYRLREHDGDRNGIVNISIRLNAPD 265
           FLSYRLR+  G+RNGIVN+S+R+  P+
Sbjct: 108 FLSYRLRDDKGERNGIVNLSVRMKVPE 134


>ref|XP_002511807.1| conserved hypothetical protein [Ricinus communis]
           gi|223548987|gb|EEF50476.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 196

 Score =  105 bits (261), Expect = 2e-20
 Identities = 55/137 (40%), Positives = 83/137 (60%), Gaps = 5/137 (3%)
 Frame = +2

Query: 8   EGASYPSWNEKLELALPSYVKHIRVDVKCKTSSGERTIGSANIPLTDFLDDYIPPNCLHF 187
           +G S PSWNEKLE+ +  +   I ++V+CK  SG R IG A+IP++DF+  Y P N LHF
Sbjct: 50  QGGSNPSWNEKLEIDMSMHAHFITLEVQCKVGSGNRVIGIASIPVSDFMGGYAPENYLHF 109

Query: 188 LSYRLREHDGDRNGIVNISIRLNAPDYVPRALPTLTVQAGYRNS-NACGW---MPSSGFQ 355
           LSYRLR+  G++NGI+N+S+++    ++        + AGY +S ++ G+    P+ G  
Sbjct: 110 LSYRLRDLRGEKNGIINVSVKVKGAAHIVIPAGRKDLPAGYTSSPSSSGFGLSQPTWGVP 169

Query: 356 TPYNN-SRGSFAIGIPV 403
              NN   G    G+PV
Sbjct: 170 ARQNNFYDGGVVTGVPV 186


Top