BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024364
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a...   251   5e-65
ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricin...   250   1e-64
ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis ...   249   3e-64
ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabid...   248   5e-64
emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]   244   6e-63

>ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Cucumis sativus] gi|449523563|ref|XP_004168793.1|
            PREDICTED: putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 3-like [Cucumis sativus]
          Length = 1113

 Score =  251 bits (642), Expect = 5e-65
 Identities = 127/157 (80%), Positives = 140/157 (89%)
 Frame = +3

Query: 3    LRLSGSGEKSIIFSQWTSFFDLLEIALKKKGIGFLRFDGRLSQKNREYVLKEFSDSKEKM 182
            + L GSGEKSI+FSQWT+FFDLLEI LK+K IGF RFDG+LSQK+RE VLKEFS+SKE  
Sbjct: 957  INLLGSGEKSIVFSQWTTFFDLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIK 1016

Query: 183  VLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKXXXXXXXFIVKDTV 362
            V+L+SLKAGGVGLNLTAASNVF+MDPWWNPAVEEQAIMRIHRIGQK       FIVKDTV
Sbjct: 1017 VMLISLKAGGVGLNLTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRRVRVRRFIVKDTV 1076

Query: 363  EERMQEVQARKERMIAGALTDGEVRSVRIEELKMLFR 473
            EERMQ+VQARK+RMIAGALTD EVR+ RIEELKMLFR
Sbjct: 1077 EERMQQVQARKQRMIAGALTDEEVRTARIEELKMLFR 1113


>ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis]
            gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16,
            putative [Ricinus communis]
          Length = 1051

 Score =  250 bits (638), Expect = 1e-64
 Identities = 127/157 (80%), Positives = 138/157 (87%)
 Frame = +3

Query: 3    LRLSGSGEKSIIFSQWTSFFDLLEIALKKKGIGFLRFDGRLSQKNREYVLKEFSDSKEKM 182
            +R S  GEKSIIFSQWTSF DLLEI L+++ IGFLRFDG+L QK RE  LKEF+++KEKM
Sbjct: 895  IRRSDCGEKSIIFSQWTSFLDLLEIPLRRRAIGFLRFDGKLVQKQRERTLKEFNETKEKM 954

Query: 183  VLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKXXXXXXXFIVKDTV 362
            VLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQK       FIVKDT+
Sbjct: 955  VLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRTVTVRRFIVKDTL 1014

Query: 363  EERMQEVQARKERMIAGALTDGEVRSVRIEELKMLFR 473
            EERMQ+VQARK+RMIAGALTD EVRS RIEELKMLFR
Sbjct: 1015 EERMQQVQARKQRMIAGALTDEEVRSARIEELKMLFR 1051


>ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297311253|gb|EFH41677.1| SNF2 domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1305

 Score =  249 bits (635), Expect = 3e-64
 Identities = 124/157 (78%), Positives = 140/157 (89%)
 Frame = +3

Query: 3    LRLSGSGEKSIIFSQWTSFFDLLEIALKKKGIGFLRFDGRLSQKNREYVLKEFSDSKEKM 182
            ++ SGSGEKSI+FSQWTSF DLLEI L++KG  FLRFDG+L+QK RE VLKEF+++K+K 
Sbjct: 1149 IQKSGSGEKSIVFSQWTSFLDLLEIPLRRKGFEFLRFDGKLAQKGREKVLKEFNETKQKT 1208

Query: 183  VLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKXXXXXXXFIVKDTV 362
            +LLMSLKAGGVGLNLTAAS+VFLMDPWWNPAVEEQAIMRIHRIGQK       FIVKDTV
Sbjct: 1209 ILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTV 1268

Query: 363  EERMQEVQARKERMIAGALTDGEVRSVRIEELKMLFR 473
            EERMQ+VQARK+RMIAGALTD EVRS R+EELKMLFR
Sbjct: 1269 EERMQQVQARKQRMIAGALTDEEVRSARLEELKMLFR 1305


>ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
            gi|60390960|sp|Q9FIY7.1|SM3L3_ARATH RecName:
            Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 3; Short=SMARCA3-like protein 3
            gi|10178192|dbj|BAB11616.1| DNA repair protein-like
            [Arabidopsis thaliana] gi|332007595|gb|AED94978.1|
            Helicase protein with RING/U-box domain [Arabidopsis
            thaliana]
          Length = 1277

 Score =  248 bits (633), Expect = 5e-64
 Identities = 123/157 (78%), Positives = 140/157 (89%)
 Frame = +3

Query: 3    LRLSGSGEKSIIFSQWTSFFDLLEIALKKKGIGFLRFDGRLSQKNREYVLKEFSDSKEKM 182
            ++ SGSGEKSI+FSQWTSF DLLEI L+++G  FLRFDG+L+QK RE VLKEF+++K+K 
Sbjct: 1121 IKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKT 1180

Query: 183  VLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKXXXXXXXFIVKDTV 362
            +LLMSLKAGGVGLNLTAAS+VFLMDPWWNPAVEEQAIMRIHRIGQK       FIVKDTV
Sbjct: 1181 ILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTV 1240

Query: 363  EERMQEVQARKERMIAGALTDGEVRSVRIEELKMLFR 473
            EERMQ+VQARK+RMIAGALTD EVRS R+EELKMLFR
Sbjct: 1241 EERMQQVQARKQRMIAGALTDEEVRSARLEELKMLFR 1277


>emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]
          Length = 1249

 Score =  244 bits (624), Expect = 6e-63
 Identities = 121/151 (80%), Positives = 136/151 (90%)
 Frame = +3

Query: 21   GEKSIIFSQWTSFFDLLEIALKKKGIGFLRFDGRLSQKNREYVLKEFSDSKEKMVLLMSL 200
            GEKSI+FSQWTSF DLLEI L+++GIGFLR+DG++ QK RE +LKEFS+++EKMVLLMSL
Sbjct: 1099 GEKSIVFSQWTSFLDLLEIPLRRRGIGFLRYDGKVVQKQRERILKEFSETEEKMVLLMSL 1158

Query: 201  KAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKXXXXXXXFIVKDTVEERMQE 380
            KAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQ+       FIVKDTVEERMQ+
Sbjct: 1159 KAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQERTVRVRRFIVKDTVEERMQQ 1218

Query: 381  VQARKERMIAGALTDGEVRSVRIEELKMLFR 473
            VQARK+RMI GALTD EVR+ RIEELKMLFR
Sbjct: 1219 VQARKQRMITGALTDEEVRTARIEELKMLFR 1249