BLASTX nr result
ID: Coptis21_contig00024360
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00024360
(1872 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, ... 489 e-135
ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li... 466 e-129
ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein ho... 462 e-127
ref|XP_002300637.1| predicted protein [Populus trichocarpa] gi|2... 450 e-124
emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera] 443 e-122
>ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
communis] gi|223551394|gb|EEF52880.1| brca1 interacting
protein helicase 1 brip1, putative [Ricinus communis]
Length = 1248
Score = 489 bits (1258), Expect = e-135
Identities = 287/603 (47%), Positives = 368/603 (61%), Gaps = 7/603 (1%)
Frame = -3
Query: 1870 QLWASVISTGPGNQPLNASYKTADAYDFQDALGVSLEEICKIVPGGALVFFPSYKLMEKL 1691
Q+WA+VISTGP N PLNASYKTAD + FQDALG +LEEIC IVP G+LVFFPSYKLMEKL
Sbjct: 516 QVWAAVISTGPDNYPLNASYKTADEFAFQDALGKTLEEICMIVPAGSLVFFPSYKLMEKL 575
Query: 1690 CTRWRETGQWSRLNTQKSLFVEPRGSQDE-FELTLKDYYDSIRQGNGSAAWXXXXXXXXX 1514
C RWRETGQWSRLN +KSLFVEPRGSQ+E F+ LK YYDSI + N A
Sbjct: 576 CNRWRETGQWSRLNAKKSLFVEPRGSQEEEFDSVLKGYYDSICKCNTHAV-----GRKKR 630
Query: 1513 XKQSDVKAQQEPPRG---GSAFLAVCRGKVSEGMDFSDENARVVVIVGIPFPNIHDIQVA 1343
K+ D+K E G+AFLAVCRGKVSEGMDFSD+NARVV++VGIPFPNI DIQV
Sbjct: 631 VKRLDLKKAVESTENLGKGAAFLAVCRGKVSEGMDFSDDNARVVIVVGIPFPNILDIQVR 690
Query: 1342 EKKKFNDTYKSSKNLLSGNEWYCQQAFRALNQAAGRCIRHRFDYGAIIFMDERFKQERNV 1163
KK +NDTYK+SKNLLSGNEWYC QAFRALNQA GRCIRHRFDYGAII +DER+K+E+N
Sbjct: 691 LKKSYNDTYKTSKNLLSGNEWYCYQAFRALNQAIGRCIRHRFDYGAIILLDERYKKEQNR 750
Query: 1162 AYVSKWLRKSLKQYTSFEMSLEGLRSFFQVAKERSSHKNMDGPKFLDIKEDSMKPKVVYK 983
Y+SKWLRKS+ QY S+ MS+EGL+SFF+ KE K +D + + + P+
Sbjct: 751 MYISKWLRKSICQYDSYSMSIEGLKSFFRDVKENIGKKMVDQLPNSETEGQKISPREPAN 810
Query: 982 GTGKCKNHKNNNSGLPIGEKVLSKYFSTEKTGRCAASSVLGNGDASLPNLYSRGDVVDLT 803
G + KN K N S G+ V S +C A S L D ++ +
Sbjct: 811 GFTRKKNQKLNKSDNCAGKLVSSM--------KCNAISHL-----------KSQDYIEQS 851
Query: 802 FAQTDENAMGEHRDYVDLECSSEKDLRLSESIYTASVPDSPEQIVVKETPGMRENSIFSS 623
+ Q D++ + R+ D+E K+ R E S + PE +VKETPGM N +S
Sbjct: 852 YMQIDQD-IDSRREITDVERDFPKESRFLEE----SSQEDPEMTLVKETPGMGFNGTTAS 906
Query: 622 PAVFSNNDNSTSTIVQSHNDLSDRLSFHSSPAETSSGTICEGKPSLTVTPER-IKPYTND 446
FS + NS+ T++Q+ + +D+ S +S +S + SL VTP++ T
Sbjct: 907 SGSFSKDGNSSLTMIQASVEHTDQESSYSVSLTNASKDPGKACCSLAVTPKKDFNANTCS 966
Query: 445 TKREAESSFNLSVNSHTEKRRKPXXXXXXXXXXXXXXSNPDSKLPRADGKRMSTL--KDT 272
EAES+ NLSVNSHT+K+R+P +PD + P T+ KD
Sbjct: 967 LIPEAESTLNLSVNSHTQKKRQP--IGLPFINLVEGPDSPDMESPGCFRSTTDTMASKDA 1024
Query: 271 IHKIEFSSEVDHNKFEHTNLNVPQKPMMDNCGTLCLSSNIVMDKRLHLCCSLCTKSLGLP 92
+IEF D + + P+ +NC ++S+ VMD++L + CSLC LGLP
Sbjct: 1025 NRRIEFDLATDSAEHQSMESKAPRVLPTNNCAPSSINSDPVMDQKLQISCSLCKSPLGLP 1084
Query: 91 DDQ 83
++Q
Sbjct: 1085 ENQ 1087
>ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
Length = 1255
Score = 466 bits (1199), Expect = e-129
Identities = 281/608 (46%), Positives = 345/608 (56%), Gaps = 13/608 (2%)
Frame = -3
Query: 1870 QLWASVISTGPGNQPLNASYKTADAYDFQDALGVSLEEICKIVPGGALVFFPSYKLMEKL 1691
QLWA++ ST PGN PLNASYKTADAY FQDALG SLEEI KIVPGG LVFFPSYKLMEKL
Sbjct: 510 QLWAAIFSTSPGNYPLNASYKTADAYAFQDALGKSLEEIFKIVPGGTLVFFPSYKLMEKL 569
Query: 1690 CTRWRETGQWSRLNTQKSLFVEPRG-SQDEFELTLKDYYDSIRQGNGSAAWXXXXXXXXX 1514
C+RWRETGQWS+LN QK LF+EPRG SQD+FE LK YY+S+R+G
Sbjct: 570 CSRWRETGQWSQLNEQKFLFIEPRGGSQDDFEPILKAYYESVRRGTKPTLGRKRRTKKMD 629
Query: 1513 XKQSDVKAQQE-PPRGGSAFLAVCRGKVSEGMDFSDENARVVVIVGIPFPNIHDIQVAEK 1337
QSD K Q+ + G+AFLAV RGKVSEG+DFSDENAR V+IVGIPFPN+HDIQVA+K
Sbjct: 630 LSQSDEKESQDNSKKKGAAFLAVFRGKVSEGIDFSDENARAVIIVGIPFPNVHDIQVAQK 689
Query: 1336 KKFNDTYKSSKNLLSGNEWYCQQAFRALNQAAGRCIRHRFDYGAIIFMDERFKQERNVAY 1157
KK+ND YKSSK+LLSGNEWYC QAFRALNQAAGRCIRHRFDYG II +DERF+++RN AY
Sbjct: 690 KKYNDMYKSSKDLLSGNEWYCHQAFRALNQAAGRCIRHRFDYGGIILLDERFREDRNTAY 749
Query: 1156 VSKWLRKSLKQYTSFEMSLEGLRSFFQVAKERSSHKNMDGPKFLDIKEDSMKPKVVYKGT 977
+SKWLRKS+KQY SF+MSLE L+SFF AKE+ K ++ + + + G+
Sbjct: 750 ISKWLRKSIKQYESFDMSLERLKSFFIDAKEQVGDKAVNVLQSAETNVQEILSMDQIIGS 809
Query: 976 GKCKNHK---------NNNSGLPIGEKVLSKYFSTEKTGRCA-ASSVLGNGDASLPNLYS 827
+ KN K + G ++ + S +K RC+ A+S + D ++
Sbjct: 810 TRKKNQKLKKPDHGVQKDEEGFSSCKEYIDLECSPQKDSRCSKATSPASSHDGPEVSIVK 869
Query: 826 RGDVVDLTFAQTDENAMGEHRDYVDLECSSEKDLRLSESIYTASVPDSPEQIVVKETPGM 647
VD QT S KD S +I AS
Sbjct: 870 ETPGVDGNITQTS-------------PVSFSKDENSSSTIIQAS---------------- 900
Query: 646 RENSIFSSPAVFSNNDNSTSTIVQSHNDLSDRLSFHSSPAETSSGTICEGKPSLTVTPER 467
DL D+ FHS SSG SL VTPER
Sbjct: 901 --------------------------TDLPDQSLFHSMSYTNSSGPPSRAMCSLLVTPER 934
Query: 466 -IKPYTNDTKREAESSFNLSVNSHTEKRRKPXXXXXXXXXXXXXXSNPDSKLPRADGKRM 290
T++ E ES NLSVNSH +KRRK PD+K P G M
Sbjct: 935 DFIANTSNMMPETESPLNLSVNSHAQKRRKSMILPSVNPTQAEHSDAPDAKTPGHIGNSM 994
Query: 289 STLKDTIHKIEFSSEVDHNKFEHTNLNVPQKPMMDNCGTLCLSSNIVMDKRLHLCCSLCT 110
+T +D +IEF ++ + N+ Q M++C +SS MDK+L + CSLC
Sbjct: 995 AT-RDANRRIEFGFGSKFSEDKLKKSNIRQLLTMNHCDASSVSSCCSMDKQLQIFCSLCR 1053
Query: 109 KSLGLPDD 86
LGLP++
Sbjct: 1054 NPLGLPEN 1061
>ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein homolog [Cucumis sativus]
Length = 1239
Score = 462 bits (1190), Expect = e-127
Identities = 274/609 (44%), Positives = 360/609 (59%), Gaps = 14/609 (2%)
Frame = -3
Query: 1870 QLWASVISTGPGNQPLNASYKTADAYDFQDALGVSLEEICKIVPGGALVFFPSYKLMEKL 1691
Q+W +VISTGPGN PLN SYKTAD Y FQDALG SLEEI I PGG LVFFPSYKLMEKL
Sbjct: 521 QVWPAVISTGPGNYPLNGSYKTADGYAFQDALGKSLEEIFFIAPGGCLVFFPSYKLMEKL 580
Query: 1690 CTRWRETGQWSRLNTQKSLFVEPRG-SQDEFELTLKDYYDSIRQGNGSAAWXXXXXXXXX 1514
RW ETGQWSRLN +KSLFVEPRG +Q++F+ LK YYD+IR G+ A
Sbjct: 581 QNRWSETGQWSRLNARKSLFVEPRGGAQEDFDSILKGYYDTIRLGDNFAIGKKSRGKKVK 640
Query: 1513 XKQSDVKAQQEPPRGGSAFLAVCRGKVSEGMDFSDENARVVVIVGIPFPNIHDIQVAEKK 1334
S V E P+ G+A LAV RGKVSEG+DFSD+NARVV+IVGIPFPN++DIQVA KK
Sbjct: 641 PNDSYVVGC-ENPKEGAALLAVFRGKVSEGIDFSDDNARVVIIVGIPFPNVNDIQVALKK 699
Query: 1333 KFNDTYKSSKNLLSGNEWYCQQAFRALNQAAGRCIRHRFDYGAIIFMDERFKQERNVAYV 1154
KFND YK SKNLLSGNEWYCQQAFRALNQAAGRCIRH+FDYGAI+ +DERF++ERN Y+
Sbjct: 700 KFNDAYKMSKNLLSGNEWYCQQAFRALNQAAGRCIRHKFDYGAIMLLDERFQEERNRTYI 759
Query: 1153 SKWLRKSLKQYTSFEMSLEGLRSFFQVAKERSSHKNMDGPKFLDIKEDSMKPKVVYKGTG 974
SKWLRKS+KQ+ +FE S+E L+SFF KER S+
Sbjct: 760 SKWLRKSIKQFDNFEQSMEELKSFFSHIKERISN-------------------------- 793
Query: 973 KCKNHKNNNSGLPIGEKVLSKYFSTEKTGRCAASSVLGNGDASLPNLYSRGDVVDLTFAQ 794
N S LP E T C + SR + F +
Sbjct: 794 ------NKESELPNSEN------EEHITSTCPS---------------SRRRMKIGKFDK 826
Query: 793 TDENAMGEHRD----YVDLECSSEKDLRLSESIYTASVPDSPEQIVVKETPGMRENSIFS 626
+ H D +DLECS E + R E + +V + P+ +V+ETP + + + +
Sbjct: 827 FNHRGQKAHEDVKNCIIDLECSVETETRNHEFLSMNTVLEVPDSPIVQETPCV--DIVGA 884
Query: 625 SPAVFSNNDNSTSTIVQSHNDLSDRLSFHSSPAETSSGTICEGKPSLTVTPER-IKPYTN 449
+ S ++ STST+++++++LSD+LS S P S+ + + S+ TPER +
Sbjct: 885 TSPRESKDERSTSTVIEAYSELSDQLSHQSLPLIKSTRSPLTSETSMLNTPERNVSVNAY 944
Query: 448 DTKREAESSFNLSVNSHTEKRRKPXXXXXXXXXXXXXXSNPDSKLPRAD--------GKR 293
++ ESS N+SVNSHT+KRRK ++P +K P + +
Sbjct: 945 SFAQDTESSLNMSVNSHTQKRRKSMGITITKLAQEEFLTDPKTKNPECNSVDRSSIISRN 1004
Query: 292 MSTLKDTIHKIEFSSEVDHNKFEHTNLNVPQKPMMDNCGTLCLSSNIVMDKRLHLCCSLC 113
+++ KDT ++I + + + LNV Q P +++ + LSS + MDK+LHL C+LC
Sbjct: 1005 LTSPKDTNYEILLTEK------KSNGLNVTQMPKLNDTSPVYLSSGLPMDKKLHLSCALC 1058
Query: 112 TKSLGLPDD 86
LG P++
Sbjct: 1059 RSPLGRPEN 1067
>ref|XP_002300637.1| predicted protein [Populus trichocarpa] gi|222842363|gb|EEE79910.1|
predicted protein [Populus trichocarpa]
Length = 1183
Score = 450 bits (1158), Expect = e-124
Identities = 281/609 (46%), Positives = 361/609 (59%), Gaps = 14/609 (2%)
Frame = -3
Query: 1870 QLWASVISTGPGNQPLNASYKTADAYDFQDALGVSLEEICKIVPGGALVFFPSYKLMEKL 1691
Q+ SVIST P N PLNASYKTAD Y FQDALG SLEEICKIVP G+LVFFPSYKLMEKL
Sbjct: 512 QVCVSVISTSPDNYPLNASYKTADCYTFQDALGKSLEEICKIVPAGSLVFFPSYKLMEKL 571
Query: 1690 CTRWRETGQWSRLNTQKSLFVEPRG-SQDEFELTLKDYYDSIRQGNGSAAWXXXXXXXXX 1514
RWRETGQWSRLN +K LFVEPRG SQ++F+ LK YYD IR+ A
Sbjct: 572 SNRWRETGQWSRLNARKPLFVEPRGGSQEDFDSILKGYYDCIRRDKRPALGRKRKVKKVD 631
Query: 1513 XKQSD-VKAQQEPPRGGSAFLAVCRGKVSEGMDFSDENARVVVIVGIPFPNIHDIQVAEK 1337
D ++ +GG+AFLAVCRGKVSEG+DFSD+ AR
Sbjct: 632 ANHLDGTESTDNSEKGGAAFLAVCRGKVSEGIDFSDDYAR-------------------- 671
Query: 1336 KKFNDTYKSSKNLLSGNEWYCQQAFRALNQAAGRCIRHRFDYGAIIFMDERFKQERNVAY 1157
KK+ND YK+SKNLL GNEWYCQQAFRALNQA GRCIRH+FDYG+II +DER+K+ERN Y
Sbjct: 672 KKYNDAYKTSKNLLGGNEWYCQQAFRALNQAVGRCIRHKFDYGSIILLDERYKEERNRVY 731
Query: 1156 VSKWLRKSLKQYTSFEMSLEGLRSFFQVAKERSSHKNMDGPKFLDIKEDSMKPKVVYK-- 983
+SKWLRKS++Q+ +F+MSLE LRSFF+ AKE+ KNM+ +FL + D+ K K + +
Sbjct: 732 ISKWLRKSIQQHNNFDMSLEVLRSFFRNAKEKVG-KNME--EFL-LNSDTNKEKNIPRMD 787
Query: 982 ---GTGKCKNHKNNNSGLPIGEKVLSKYFSTEKTGRCAASSVLGNGDASLPNLYSRGDV- 815
G + K+ K +NS GEK++S L + ++ L S+ DV
Sbjct: 788 QIVGHTRNKSQKLSNSD-QYGEKIVS----------------LTKCEGAVSKLKSQDDVE 830
Query: 814 VDLTFAQTDENAMGEHRDYVDLECSSEKDLRLSESIYTASVPDSPEQIVVKETPGMRENS 635
V +F DE + ++ +DLEC S R SE AS + PE +VKETPGM E
Sbjct: 831 VQASFQIDDE--LESSQEIIDLECDSHIGSRCSE----ASFHEDPEITLVKETPGMGECG 884
Query: 634 IFSSPAVFSNNDNSTSTIVQSHNDLSDRLSFHSSPAETSSGTICEGKPSLTVTPER-IKP 458
+SP FS + NS+ST++Q+ N+L+D+ S + + S+ VTPE+ +
Sbjct: 885 AAASPGFFSKDGNSSSTMMQAPNELADQGLVSLVSVTNQSAAPDKSQCSMLVTPEKELTI 944
Query: 457 YTNDTKREAESSFNLSVNSHTEKRRKPXXXXXXXXXXXXXXSNPDSKLPRADG-----KR 293
T + + E ESS NLSVNSHT+KRRK D+ G +
Sbjct: 945 TTCNLRPEVESSLNLSVNSHTQKRRK----SMDLSLINLQGEQSDTSYAETPGCVSFTRS 1000
Query: 292 MSTLKDTIHKIEFSSEVDHNKFEHTNLNVPQKPMMDNCGTLCLSSNIVMDKRLHLCCSLC 113
T DT +IEF E + + + T P P ++CGT C SS+ +MDKRL + CSLC
Sbjct: 1001 SVTSGDTNRRIEFGLETNCRERQSTKHASPLLP--NSCGTSCASSDSLMDKRLQISCSLC 1058
Query: 112 TKSLGLPDD 86
LG P++
Sbjct: 1059 KSPLGRPEN 1067
>emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]
Length = 1261
Score = 443 bits (1139), Expect = e-122
Identities = 274/608 (45%), Positives = 343/608 (56%), Gaps = 13/608 (2%)
Frame = -3
Query: 1870 QLWASVISTGPGNQPLNASYKTADAYDFQDALGVSLEEICKIVPGGALVFFPSYKLMEKL 1691
QLWA++ ST PGN PLNASYKTADAY FQDALG SLEEI KIVPGG LVFFPSYKLMEKL
Sbjct: 448 QLWAAIFSTSPGNYPLNASYKTADAYAFQDALGKSLEEIFKIVPGGTLVFFPSYKLMEKL 507
Query: 1690 CTRWRETGQWSRLNTQKSLFVEPR-GSQDEFELTLKDYYDSIRQGNGSAAWXXXXXXXXX 1514
C+RWRET EPR GSQD+FE LK YY+S+R+G
Sbjct: 508 CSRWRET--------------EPRGGSQDDFEPILKAYYESVRRGTKPTLGRKRRTKKMD 553
Query: 1513 XKQSDVK-AQQEPPRGGSAFLAVCRGKVSEGMDFSDENARVVVI----------VGIPFP 1367
QSD K +Q + G+AFLAV RGKVSEG+DFSDENAR VV I
Sbjct: 554 LSQSDEKESQDNSKKKGAAFLAVFRGKVSEGIDFSDENARAVVSFLPSLKSNIHFNISSV 613
Query: 1366 NIHDIQVAEKKKFNDTYKSSKNLLSGNEWYCQQAFRALNQAAGRCIRHRFDYGAIIFMDE 1187
N HDIQVA+KKK+ND YKSSK+LLSGNEWYC QAFRALNQAA DE
Sbjct: 614 NSHDIQVAQKKKYNDMYKSSKDLLSGNEWYCHQAFRALNQAA----------------DE 657
Query: 1186 RFKQERNVAYVSKWLRKSLKQYTSFEMSLEGLRSFFQVAKERSSHKNMDGPKFLDIKEDS 1007
RF+++RN AY+SKWLRKS+KQY SF+MSLE L+SFF AKE+ K ++ + +
Sbjct: 658 RFREDRNTAYISKWLRKSIKQYESFDMSLERLKSFFIDAKEQVGDKAVNVLQSAETNVQE 717
Query: 1006 MKPKVVYKGTGKCKNHKNNNSGLPIGEKVLSKYFSTEKTGRCAASSVLGNGDASLPNLYS 827
+ G+ + KN K + + V + T++T R S + S
Sbjct: 718 ILSMDQIIGSTRKKNQKLKKPDHGVQKVVSNNTRVTKRTARICXSPTT-EYNTFFHQQRS 776
Query: 826 RGDVVDLTFAQTDENAMGEHRDYVDLECSSEKDLRLSESIYTASVPDSPEQIVVKETPGM 647
G+ DE ++Y+DLECS +KD R S++ AS D PE +VKETPG+
Sbjct: 777 PGNTKFQKXVLKDEEGFSXCKEYIDLECSPQKDSRCSKATSPASSHDGPEVSIVKETPGV 836
Query: 646 RENSIFSSPAVFSNNDNSTSTIVQSHNDLSDRLSFHSSPAETSSGTICEGKPSLTVTPER 467
N +SP FS ++NS+STI+Q+ D D+ FHS SSG SL VTPER
Sbjct: 837 DGNITQTSPXSFSKDENSSSTIIQASTDXPDQSLFHSMSYTNSSGPPSRAMCSLXVTPER 896
Query: 466 -IKPYTNDTKREAESSFNLSVNSHTEKRRKPXXXXXXXXXXXXXXSNPDSKLPRADGKRM 290
T++ E ES NLSVNSH +KRRK PD+K P G M
Sbjct: 897 DFIANTSNMMPETESPLNLSVNSHAQKRRKSMILPSVNPTQAEHSDAPDAKTPGHIGNSM 956
Query: 289 STLKDTIHKIEFSSEVDHNKFEHTNLNVPQKPMMDNCGTLCLSSNIVMDKRLHLCCSLCT 110
+T +D +IEF ++ + N+ Q M++C +SS MDK+L + CSLC
Sbjct: 957 AT-RDANRRIEFGFGSKFSEDKLKKSNIXQLLTMNHCDASSVSSCCSMDKQLQIFCSLCR 1015
Query: 109 KSLGLPDD 86
LGLP++
Sbjct: 1016 NPLGLPEN 1023