BLASTX nr result

ID: Coptis21_contig00024356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024356
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242292.1| uncharacterized protein LOC100803175 [Glycin...   107   1e-21
ref|XP_003534664.1| PREDICTED: uncharacterized protein LOC100820...   100   1e-19
ref|XP_002316559.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_002518429.1| conserved hypothetical protein [Ricinus comm...    94   1e-17
gb|AFK39007.1| unknown [Lotus japonicus]                               86   3e-15

>ref|NP_001242292.1| uncharacterized protein LOC100803175 [Glycine max]
           gi|255640618|gb|ACU20594.1| unknown [Glycine max]
          Length = 172

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/81 (67%), Positives = 59/81 (72%)
 Frame = -2

Query: 245 MESSILQFSSHLTFFTPKTNSLPAASPFWPCKRRTSCQPTPLRCHKMFVPGFGEASPEAK 66
           MES      S L +  P T S   A PFWPCKRR+S QPT L C KMFVPGFGEASPEAK
Sbjct: 1   MESCATLPLSQLPYVYPSTLSSNKAYPFWPCKRRSSSQPTRLHCSKMFVPGFGEASPEAK 60

Query: 65  AAKNLHAFFTYVAVKIVLAQL 3
           AA+NLH FFT+VAVKIV AQL
Sbjct: 61  AAQNLHNFFTFVAVKIVAAQL 81


>ref|XP_003534664.1| PREDICTED: uncharacterized protein LOC100820127 [Glycine max]
          Length = 172

 Score =  100 bits (250), Expect = 1e-19
 Identities = 50/72 (69%), Positives = 54/72 (75%)
 Frame = -2

Query: 218 SHLTFFTPKTNSLPAASPFWPCKRRTSCQPTPLRCHKMFVPGFGEASPEAKAAKNLHAFF 39
           S L +  P T S   A PFW CKRR S +PT L C KMFVPGFGEASPEAKAA+NLH FF
Sbjct: 10  SQLPYVYPSTLSSNKAYPFWSCKRRISSRPTRLHCSKMFVPGFGEASPEAKAAENLHNFF 69

Query: 38  TYVAVKIVLAQL 3
           T+VAVKIV AQL
Sbjct: 70  TFVAVKIVAAQL 81


>ref|XP_002316559.1| predicted protein [Populus trichocarpa] gi|222859624|gb|EEE97171.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/81 (60%), Positives = 57/81 (70%)
 Frame = -2

Query: 245 MESSILQFSSHLTFFTPKTNSLPAASPFWPCKRRTSCQPTPLRCHKMFVPGFGEASPEAK 66
           ME+S +   S L+FF PK      A P W CK+  + QPT L C KM+VPGFGEASPE K
Sbjct: 1   METSSVLSLSQLSFFLPKPYR-NKAYPSWSCKKPRTTQPTRLYCQKMYVPGFGEASPEKK 59

Query: 65  AAKNLHAFFTYVAVKIVLAQL 3
           AAKNLH FFTY+AV+IV AQL
Sbjct: 60  AAKNLHDFFTYIAVRIVTAQL 80


>ref|XP_002518429.1| conserved hypothetical protein [Ricinus communis]
           gi|223542274|gb|EEF43816.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/70 (67%), Positives = 54/70 (77%)
 Frame = -2

Query: 212 LTFFTPKTNSLPAASPFWPCKRRTSCQPTPLRCHKMFVPGFGEASPEAKAAKNLHAFFTY 33
           L+  +PK+N    A P WPCK+  + Q T LRC KM+VPGFGEASPEAKAAKNLH FFTY
Sbjct: 12  LSVCSPKSN-WNKAYPSWPCKKLRTAQSTRLRCQKMYVPGFGEASPEAKAAKNLHNFFTY 70

Query: 32  VAVKIVLAQL 3
           VAV+IV AQL
Sbjct: 71  VAVRIVTAQL 80


>gb|AFK39007.1| unknown [Lotus japonicus]
          Length = 90

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/55 (72%), Positives = 44/55 (80%)
 Frame = -2

Query: 167 PFWPCKRRTSCQPTPLRCHKMFVPGFGEASPEAKAAKNLHAFFTYVAVKIVLAQL 3
           PFWP  +R S   T ++C+KMFVPGFGEASPEAKAA NLH FFTY AVKIV AQL
Sbjct: 28  PFWPGNKRRSSPSTRIQCNKMFVPGFGEASPEAKAANNLHNFFTYTAVKIVAAQL 82


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