BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024348
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...   150   1e-34
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   147   9e-34
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   144   7e-33
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...   142   2e-32
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32

>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score =  150 bits (379), Expect = 1e-34
 Identities = 70/155 (45%), Positives = 104/155 (67%)
 Frame = -3

Query: 467 GMDSSIITEVQARLQFQEGTLPVKYLGLPLITTRLSSRDCAPLISRLTERVQSWKGCLLS 288
           G++SS  + + A + F  G LPV+YLGLPL+  RL S DC PLI R+T R++SW   +LS
Sbjct: 14  GVNSSKASRLAANMGFSIGHLPVRYLGLPLLFGRLQSCDCDPLIQRITSRIRSWSARVLS 73

Query: 287 YAGRVQLIKAVLNSLSVYWFQSFIIPQKTVEELNRICRNFLWNGTDCSLSHALIGWEETC 108
           +AGR+QL+++VL SL VYW   F++P K   ++++I R++LW G +     A + W+E C
Sbjct: 74  FAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDKILRSYLWRGKEEGRGGAKVAWDEVC 133

Query: 107 FPYEEGGLAIRDLSKVNQAANMKHLWNIVSSKDNL 3
            P++EGGLAIRD S  N A+ +K LW ++    +L
Sbjct: 134 LPFDEGGLAIRDGSSWNIASTLKILWLLLVKSGSL 168


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  147 bits (371), Expect = 9e-34
 Identities = 68/155 (43%), Positives = 99/155 (63%)
 Frame = -3

Query: 467  GMDSSIITEVQARLQFQEGTLPVKYLGLPLITTRLSSRDCAPLISRLTERVQSWKGCLLS 288
            G+ ++   EV  R  F  G LPV+YLGLPLIT RLS+ DC PL+ ++ +R+ SW    LS
Sbjct: 747  GLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLS 806

Query: 287  YAGRVQLIKAVLNSLSVYWFQSFIIPQKTVEELNRICRNFLWNGTDCSLSHALIGWEETC 108
            YAGR+ LI +VL S+  +W  +F +P+K + EL ++C  FLW+GT+ + + A I W   C
Sbjct: 807  YAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVC 866

Query: 107  FPYEEGGLAIRDLSKVNQAANMKHLWNIVSSKDNL 3
             P +EGGL +R L + N    +K +W IVS  ++L
Sbjct: 867  KPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSL 901


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  144 bits (363), Expect = 7e-33
 Identities = 63/154 (40%), Positives = 97/154 (62%)
 Frame = -3

Query: 464  MDSSIITEVQARLQFQEGTLPVKYLGLPLITTRLSSRDCAPLISRLTERVQSWKGCLLSY 285
            + S     + AR  F  G+LPV+YLGLPL+T R++  DC PL+ ++  R+ SWK   LSY
Sbjct: 1003 ISSETCASILARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLSY 1062

Query: 284  AGRVQLIKAVLNSLSVYWFQSFIIPQKTVEELNRICRNFLWNGTDCSLSHALIGWEETCF 105
            AGR+QL+ +V++SL+ +W  +F +P+  + E+ +I   FLW+GTD +   A + W + C 
Sbjct: 1063 AGRLQLLNSVISSLTKFWISAFRLPRACIREIEQISAAFLWSGTDLNPHKAKVAWHDVCK 1122

Query: 104  PYEEGGLAIRDLSKVNQAANMKHLWNIVSSKDNL 3
            P  EGGL +R L   N+    K +W +VS+K +L
Sbjct: 1123 PKSEGGLGLRSLVDANKICCFKLIWRLVSAKHSL 1156


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score =  142 bits (359), Expect = 2e-32
 Identities = 65/155 (41%), Positives = 99/155 (63%)
 Frame = -3

Query: 467 GMDSSIITEVQARLQFQEGTLPVKYLGLPLITTRLSSRDCAPLISRLTERVQSWKGCLLS 288
           G+  +   EV A   F  GTLPV+YLGLPL+T +LSS D  PLI  + +++ SW    LS
Sbjct: 129 GLSHTSPQEVMAHFPFAVGTLPVRYLGLPLVTKQLSSTDYLPLIEHIKKKIGSWSARFLS 188

Query: 287 YAGRVQLIKAVLNSLSVYWFQSFIIPQKTVEELNRICRNFLWNGTDCSLSHALIGWEETC 108
           YAGR+ LI +VL S+  +W  +F +P++ + E++++C  +LW+G D + S A I W + C
Sbjct: 189 YAGRLNLISSVLWSICNFWMGAFRLPRECIREIDKMCSAYLWSGGDLNTSKAKIAWTDVC 248

Query: 107 FPYEEGGLAIRDLSKVNQAANMKHLWNIVSSKDNL 3
            P +EGGL +R L + N  + +K +W I+S  D+L
Sbjct: 249 KPKDEGGLGLRSLKEANDVSCLKLIWRIISHADSL 283


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  140 bits (354), Expect = 8e-32
 Identities = 60/140 (42%), Positives = 97/140 (69%)
 Frame = -3

Query: 428 LQFQEGTLPVKYLGLPLITTRLSSRDCAPLISRLTERVQSWKGCLLSYAGRVQLIKAVLN 249
           L F+EG LP+KYLG+PL+++RL +  C  L+ R+T +V+ W    LSYAGRVQLI +VL 
Sbjct: 47  LGFREGELPMKYLGVPLLSSRLKAIYCKGLVDRITSKVRHWTCRTLSYAGRVQLINSVLF 106

Query: 248 SLSVYWFQSFIIPQKTVEELNRICRNFLWNGTDCSLSHALIGWEETCFPYEEGGLAIRDL 69
           S+ VYW   F++P + ++ + +I ++FLW+G+D   + A + W++ C P +EGGL I+ +
Sbjct: 107 SIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSI 166

Query: 68  SKVNQAANMKHLWNIVSSKD 9
            + N+ A +KH+WN+ +  D
Sbjct: 167 KEWNKIALLKHIWNLCNDSD 186