BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024343
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310520.1| predicted protein [Populus trichocarpa] gi|2...    82   4e-14
emb|CBI38165.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ...    73   3e-11
gb|ADE76509.1| unknown [Picea sitchensis]                              69   5e-10

>ref|XP_002310520.1| predicted protein [Populus trichocarpa] gi|222853423|gb|EEE90970.1|
           predicted protein [Populus trichocarpa]
          Length = 710

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 38/70 (54%), Positives = 50/70 (71%)
 Frame = +1

Query: 1   RRGVVNQPGRSWIEINNQVHVFMVKDKTHPQRKEVYKLLNILATQMKRTRYVLDVGHPES 180
           RRGVV QPG SWI+I + VHVFMVKDK HPQ+KE+Y +L +L   M++  YV D    E+
Sbjct: 627 RRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVPDASDHEA 686

Query: 181 KTYKEPMEMD 210
             Y+EP E++
Sbjct: 687 --YEEPSELE 694


>emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 31/60 (51%), Positives = 44/60 (73%)
 Frame = +1

Query: 1   RRGVVNQPGRSWIEINNQVHVFMVKDKTHPQRKEVYKLLNILATQMKRTRYVLDVGHPES 180
           ++GV  QPG SWIE+ ++VHVF+VKDK+HP RK++Y +L +L  QMKR  Y+ D    E+
Sbjct: 587 QQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPDANDFEA 646


>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 31/60 (51%), Positives = 44/60 (73%)
 Frame = +1

Query: 1   RRGVVNQPGRSWIEINNQVHVFMVKDKTHPQRKEVYKLLNILATQMKRTRYVLDVGHPES 180
           ++GV  QPG SWIE+ ++VHVF+VKDK+HP RK++Y +L +L  QMKR  Y+ D    E+
Sbjct: 617 QQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPDANDFEA 676


>ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491679|gb|AES72882.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 705

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/84 (41%), Positives = 52/84 (61%)
 Frame = +1

Query: 7   GVVNQPGRSWIEINNQVHVFMVKDKTHPQRKEVYKLLNILATQMKRTRYVLDVGHPESKT 186
           GV+ QPG SWI I + +HVFMVKDK HP +K++Y +L IL  QMKR  YV +    + + 
Sbjct: 624 GVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPEA--DDDEP 681

Query: 187 YKEPMEMDMICGCPNKMKMVTALG 258
           Y+E  + ++I     +  +  A+G
Sbjct: 682 YEEESDSELILHSEMETAVDAAVG 705


>gb|ADE76509.1| unknown [Picea sitchensis]
          Length = 246

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/53 (58%), Positives = 38/53 (71%)
 Frame = +1

Query: 4   RGVVNQPGRSWIEINNQVHVFMVKDKTHPQRKEVYKLLNILATQMKRTRYVLD 162
           RGV  QPG SWIE+ N+VH FMV+DK+HPQ +E+Y  L  LA QM+   YV D
Sbjct: 106 RGVQKQPGCSWIEVKNKVHTFMVEDKSHPQTEEIYSTLEELARQMEAAGYVPD 158