BLASTX nr result

ID: Coptis21_contig00024333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024333
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632412.1| PREDICTED: transcription factor UPBEAT1-like...    88   6e-16
ref|XP_002320968.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002301522.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_003556194.1| PREDICTED: transcription factor UPBEAT1-like...    80   2e-13
ref|XP_002515253.1| transcription factor, putative [Ricinus comm...    69   3e-10

>ref|XP_003632412.1| PREDICTED: transcription factor UPBEAT1-like [Vitis vinifera]
          Length = 121

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 57/123 (46%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
 Frame = +1

Query: 19  MGAPLETLI-SFDAKGMILENXXXXXXXXXXXXWNKAFAAQ-SXXXXXXXXXXXXXXNGH 192
           MGAP + L+ S D KGM+LE             W K    +                  H
Sbjct: 1   MGAPPQPLLMSLDLKGMVLETKDSCKPSGSL--WRKVLEPKVKRRLQRRRQRILMKRRAH 58

Query: 193 GWSTRRPRICMVRKVRTLKKLVPNGKSMGLDGLFRETAHYIMSLETQVKVMQIMVCVLSG 372
              +RRP   + R+VRTLKKLVPNG SMGLDGLFRETA YI+SL+ +V+VMQIMV VLS 
Sbjct: 59  LPDSRRPTSGIQRRVRTLKKLVPNGDSMGLDGLFRETADYILSLQMRVEVMQIMVKVLSD 118

Query: 373 SNE 381
           S++
Sbjct: 119 SDK 121


>ref|XP_002320968.1| predicted protein [Populus trichocarpa] gi|222861741|gb|EEE99283.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/61 (70%), Positives = 53/61 (86%)
 Frame = +1

Query: 199 STRRPRICMVRKVRTLKKLVPNGKSMGLDGLFRETAHYIMSLETQVKVMQIMVCVLSGSN 378
           STRR    + R+VRTLKKL+PNG+S+GLDGLFRETA YI+SL+T+VKVMQIMV  L+GS+
Sbjct: 75  STRRAGYGVGRRVRTLKKLIPNGESLGLDGLFRETADYILSLQTRVKVMQIMVKELTGSD 134

Query: 379 E 381
           E
Sbjct: 135 E 135


>ref|XP_002301522.1| predicted protein [Populus trichocarpa] gi|222843248|gb|EEE80795.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 54/126 (42%), Positives = 67/126 (53%), Gaps = 18/126 (14%)
 Frame = +1

Query: 58  KGMILENXXXXXXXXXXXXWNKAFAAQSXXXXXXXXXXXXXXNGHGWSTRRP-RICMVRK 234
           KGM+  N            WNK   AQ+              NG    ++RP RI M R+
Sbjct: 15  KGMVQGNEETMDHMPNEALWNKVSEAQTKRRCPLRRQK----NGRHARSKRPGRILMKRR 70

Query: 235 -----------------VRTLKKLVPNGKSMGLDGLFRETAHYIMSLETQVKVMQIMVCV 363
                            VRTLKKL+PN +SMGLDGLFRETA YI+SL+ +VKVMQIMV V
Sbjct: 71  ARAEGSTVRSGYGIERRVRTLKKLIPNSESMGLDGLFRETADYILSLQMRVKVMQIMVKV 130

Query: 364 LSGSNE 381
           L+GS++
Sbjct: 131 LTGSDD 136


>ref|XP_003556194.1| PREDICTED: transcription factor UPBEAT1-like [Glycine max]
          Length = 127

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 51/131 (38%), Positives = 68/131 (51%), Gaps = 16/131 (12%)
 Frame = +1

Query: 37  TLISFDAKGMILENXXXXXXXXXXXXWNKAFAAQSXXXXXXXXXXXXXXNGHGWSTRRPR 216
           +L+SF  K +I               W+K   AQ+               G   S RRPR
Sbjct: 8   SLVSFSLKDLIQGTEENKTSSSYGCLWSKVLTAQAKKV-----------KGTKRSVRRPR 56

Query: 217 ICMV----------------RKVRTLKKLVPNGKSMGLDGLFRETAHYIMSLETQVKVMQ 348
             ++                R+VRTLK LVPN  S+GLDGLFR+TA YI+SL+T+V+VMQ
Sbjct: 57  RILMMNRRSGSRRGSYNGIRRRVRTLKSLVPNSDSLGLDGLFRQTADYILSLQTRVRVMQ 116

Query: 349 IMVCVLSGSNE 381
           +MV VL+GS+E
Sbjct: 117 VMVKVLTGSDE 127


>ref|XP_002515253.1| transcription factor, putative [Ricinus communis]
           gi|223545733|gb|EEF47237.1| transcription factor,
           putative [Ricinus communis]
          Length = 111

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/51 (62%), Positives = 44/51 (86%)
 Frame = +1

Query: 229 RKVRTLKKLVPNGKSMGLDGLFRETAHYIMSLETQVKVMQIMVCVLSGSNE 381
           ++V+TLKKL+PN +SMGL+GLFRETA YI+SL+ +V +MQIMV VLS  ++
Sbjct: 60  KRVKTLKKLIPNSESMGLEGLFRETADYILSLQMRVNLMQIMVKVLSSDSD 110