BLASTX nr result
ID: Coptis21_contig00024333
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00024333 (407 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632412.1| PREDICTED: transcription factor UPBEAT1-like... 88 6e-16 ref|XP_002320968.1| predicted protein [Populus trichocarpa] gi|2... 85 5e-15 ref|XP_002301522.1| predicted protein [Populus trichocarpa] gi|2... 81 1e-13 ref|XP_003556194.1| PREDICTED: transcription factor UPBEAT1-like... 80 2e-13 ref|XP_002515253.1| transcription factor, putative [Ricinus comm... 69 3e-10 >ref|XP_003632412.1| PREDICTED: transcription factor UPBEAT1-like [Vitis vinifera] Length = 121 Score = 88.2 bits (217), Expect = 6e-16 Identities = 57/123 (46%), Positives = 70/123 (56%), Gaps = 2/123 (1%) Frame = +1 Query: 19 MGAPLETLI-SFDAKGMILENXXXXXXXXXXXXWNKAFAAQ-SXXXXXXXXXXXXXXNGH 192 MGAP + L+ S D KGM+LE W K + H Sbjct: 1 MGAPPQPLLMSLDLKGMVLETKDSCKPSGSL--WRKVLEPKVKRRLQRRRQRILMKRRAH 58 Query: 193 GWSTRRPRICMVRKVRTLKKLVPNGKSMGLDGLFRETAHYIMSLETQVKVMQIMVCVLSG 372 +RRP + R+VRTLKKLVPNG SMGLDGLFRETA YI+SL+ +V+VMQIMV VLS Sbjct: 59 LPDSRRPTSGIQRRVRTLKKLVPNGDSMGLDGLFRETADYILSLQMRVEVMQIMVKVLSD 118 Query: 373 SNE 381 S++ Sbjct: 119 SDK 121 >ref|XP_002320968.1| predicted protein [Populus trichocarpa] gi|222861741|gb|EEE99283.1| predicted protein [Populus trichocarpa] Length = 135 Score = 85.1 bits (209), Expect = 5e-15 Identities = 43/61 (70%), Positives = 53/61 (86%) Frame = +1 Query: 199 STRRPRICMVRKVRTLKKLVPNGKSMGLDGLFRETAHYIMSLETQVKVMQIMVCVLSGSN 378 STRR + R+VRTLKKL+PNG+S+GLDGLFRETA YI+SL+T+VKVMQIMV L+GS+ Sbjct: 75 STRRAGYGVGRRVRTLKKLIPNGESLGLDGLFRETADYILSLQTRVKVMQIMVKELTGSD 134 Query: 379 E 381 E Sbjct: 135 E 135 >ref|XP_002301522.1| predicted protein [Populus trichocarpa] gi|222843248|gb|EEE80795.1| predicted protein [Populus trichocarpa] Length = 138 Score = 80.9 bits (198), Expect = 1e-13 Identities = 54/126 (42%), Positives = 67/126 (53%), Gaps = 18/126 (14%) Frame = +1 Query: 58 KGMILENXXXXXXXXXXXXWNKAFAAQSXXXXXXXXXXXXXXNGHGWSTRRP-RICMVRK 234 KGM+ N WNK AQ+ NG ++RP RI M R+ Sbjct: 15 KGMVQGNEETMDHMPNEALWNKVSEAQTKRRCPLRRQK----NGRHARSKRPGRILMKRR 70 Query: 235 -----------------VRTLKKLVPNGKSMGLDGLFRETAHYIMSLETQVKVMQIMVCV 363 VRTLKKL+PN +SMGLDGLFRETA YI+SL+ +VKVMQIMV V Sbjct: 71 ARAEGSTVRSGYGIERRVRTLKKLIPNSESMGLDGLFRETADYILSLQMRVKVMQIMVKV 130 Query: 364 LSGSNE 381 L+GS++ Sbjct: 131 LTGSDD 136 >ref|XP_003556194.1| PREDICTED: transcription factor UPBEAT1-like [Glycine max] Length = 127 Score = 80.1 bits (196), Expect = 2e-13 Identities = 51/131 (38%), Positives = 68/131 (51%), Gaps = 16/131 (12%) Frame = +1 Query: 37 TLISFDAKGMILENXXXXXXXXXXXXWNKAFAAQSXXXXXXXXXXXXXXNGHGWSTRRPR 216 +L+SF K +I W+K AQ+ G S RRPR Sbjct: 8 SLVSFSLKDLIQGTEENKTSSSYGCLWSKVLTAQAKKV-----------KGTKRSVRRPR 56 Query: 217 ICMV----------------RKVRTLKKLVPNGKSMGLDGLFRETAHYIMSLETQVKVMQ 348 ++ R+VRTLK LVPN S+GLDGLFR+TA YI+SL+T+V+VMQ Sbjct: 57 RILMMNRRSGSRRGSYNGIRRRVRTLKSLVPNSDSLGLDGLFRQTADYILSLQTRVRVMQ 116 Query: 349 IMVCVLSGSNE 381 +MV VL+GS+E Sbjct: 117 VMVKVLTGSDE 127 >ref|XP_002515253.1| transcription factor, putative [Ricinus communis] gi|223545733|gb|EEF47237.1| transcription factor, putative [Ricinus communis] Length = 111 Score = 69.3 bits (168), Expect = 3e-10 Identities = 32/51 (62%), Positives = 44/51 (86%) Frame = +1 Query: 229 RKVRTLKKLVPNGKSMGLDGLFRETAHYIMSLETQVKVMQIMVCVLSGSNE 381 ++V+TLKKL+PN +SMGL+GLFRETA YI+SL+ +V +MQIMV VLS ++ Sbjct: 60 KRVKTLKKLIPNSESMGLEGLFRETADYILSLQMRVNLMQIMVKVLSSDSD 110