BLASTX nr result

ID: Coptis21_contig00024331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024331
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37702.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_002280150.1| PREDICTED: chloride channel protein CLC-e [V...    94   1e-17
emb|CAN72098.1| hypothetical protein VITISV_002674 [Vitis vinifera]    85   7e-15
ref|XP_002514381.1| voltage-gated clc-type chloride channel, put...    80   1e-13
ref|XP_004154579.1| PREDICTED: LOW QUALITY PROTEIN: chloride cha...    74   1e-11

>emb|CBI37702.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/92 (50%), Positives = 67/92 (72%)
 Frame = +3

Query: 21  RVTSSIAKVEKLLVSEIYQVNSEKGRMLWTATPDMSLLSAQILMNRQSQEQLPVVLEHVK 200
           R  + I + +++LVSE+  ++ EK R+ WT TP M+L SAQ++MN     QLPV+ +HV+
Sbjct: 557 REKARIRRSKEVLVSEMCSLDGEKCRVPWTVTPGMNLFSAQMIMNTLGVNQLPVISDHVE 616

Query: 201 DQRGYLVGLLDRECIDLACRAVATQEFLTLLS 296
           D +G+ VGLLDRECI LA RAVA +E+L+ +S
Sbjct: 617 DHKGHPVGLLDRECISLAFRAVAAREYLSYVS 648


>ref|XP_002280150.1| PREDICTED: chloride channel protein CLC-e [Vitis vinifera]
           gi|301318140|gb|ADK66985.1| chloride channel ClC7 [Vitis
           vinifera]
          Length = 733

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/92 (50%), Positives = 67/92 (72%)
 Frame = +3

Query: 21  RVTSSIAKVEKLLVSEIYQVNSEKGRMLWTATPDMSLLSAQILMNRQSQEQLPVVLEHVK 200
           R  + I + +++LVSE+  ++ EK R+ WT TP M+L SAQ++MN     QLPV+ +HV+
Sbjct: 637 REKARIRRSKEVLVSEMCSLDGEKCRVPWTVTPGMNLFSAQMIMNTLGVNQLPVISDHVE 696

Query: 201 DQRGYLVGLLDRECIDLACRAVATQEFLTLLS 296
           D +G+ VGLLDRECI LA RAVA +E+L+ +S
Sbjct: 697 DHKGHPVGLLDRECISLAFRAVAAREYLSYVS 728


>emb|CAN72098.1| hypothetical protein VITISV_002674 [Vitis vinifera]
          Length = 1444

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/93 (46%), Positives = 63/93 (67%)
 Frame = +3

Query: 21   RVTSSIAKVEKLLVSEIYQVNSEKGRMLWTATPDMSLLSAQILMNRQSQEQLPVVLEHVK 200
            R  + I + ++ LVSE+  ++ EK R+ WT TP M+L SAQ++MN     QLPV+ +HV+
Sbjct: 1251 REKARIRRSKEXLVSEMCSLDGEKCRVPWTVTPGMNLFSAQMIMNTLGVNQLPVISDHVE 1310

Query: 201  DQRGYLVGLLDRECIDLACRAVATQEFLTLLSK 299
            D +G+ VGLLDRECI LA R  +  + + +LSK
Sbjct: 1311 DHKGHPVGLLDRECISLAFRLDSILKEMNVLSK 1343


>ref|XP_002514381.1| voltage-gated clc-type chloride channel, putative [Ricinus
           communis] gi|223546478|gb|EEF47977.1| voltage-gated
           clc-type chloride channel, putative [Ricinus communis]
          Length = 759

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
 Frame = +3

Query: 15  FNRVTSSIAKVEK-LLVSEIYQVNSEKGRMLWTATPDMSLLSAQILMNRQSQEQLPVVLE 191
           FN++T + A+  K LLVSEI  ++ E  ++ WTA P M L S Q++M+R    ++PVV E
Sbjct: 644 FNKITKAKAERGKELLVSEICSLDGEICQLPWTAKPSMDLFSVQLIMDRYGLSEVPVVSE 703

Query: 192 HVKDQRGYLVGLLDRECIDLACR 260
           H +D +G  VGLLDRECI L CR
Sbjct: 704 HAEDHKGQPVGLLDRECITLTCR 726


>ref|XP_004154579.1| PREDICTED: LOW QUALITY PROTEIN: chloride channel protein CLC-e-like
           [Cucumis sativus]
          Length = 779

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 37/81 (45%), Positives = 56/81 (69%)
 Frame = +3

Query: 42  KVEKLLVSEIYQVNSEKGRMLWTATPDMSLLSAQILMNRQSQEQLPVVLEHVKDQRGYLV 221
           +++  +VSEI  ++ +  R+ WTATP M +L+A+++M      Q+PVV    +DQ GY+V
Sbjct: 701 QLKDFVVSEICSLDEKMCRVPWTATPSMDILTAKMIMKNLGVTQVPVV----RDQMGYVV 756

Query: 222 GLLDRECIDLACRAVATQEFL 284
           G+LD ECIDL CR +AT+E L
Sbjct: 757 GVLDWECIDLTCRILATRESL 777


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