BLASTX nr result

ID: Coptis21_contig00024329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024329
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320025.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31
ref|XP_002301145.1| predicted protein [Populus trichocarpa] gi|2...   138   7e-31
ref|XP_004141406.1| PREDICTED: uncharacterized protein LOC101210...   134   9e-30
ref|XP_002510084.1| conserved hypothetical protein [Ricinus comm...   129   2e-28
ref|XP_002283353.1| PREDICTED: uncharacterized protein LOC100262...   129   2e-28

>ref|XP_002320025.1| predicted protein [Populus trichocarpa] gi|222860798|gb|EEE98340.1|
           predicted protein [Populus trichocarpa]
          Length = 353

 Score =  138 bits (348), Expect = 5e-31
 Identities = 86/178 (48%), Positives = 106/178 (59%)
 Frame = +3

Query: 15  GLGSCLEKSVNLITLPFLPYPSPSVPEVARSVSKLHGVNIYSQFQDICDLKLEVETPKEM 194
           G+ + +  S NL+TLP L   SP+VP V    +             + DL    ET +E 
Sbjct: 115 GMENSVTVSSNLVTLPLLQ--SPTVPVVENQAAAPELSCQEPNRDKVIDLNTVAETSEER 172

Query: 195 DLLQNLQATDSASSNSGNGNVITPQAVRPVGSSISVEYIQEGPSLKEPFKCVSKKPEEVE 374
           D LQ LQ   ++       NVI PQ VRPV SSISV  I E PSL  P K V KKPEE+E
Sbjct: 173 DPLQQLQEPSTS-------NVIAPQPVRPVCSSISVASINEDPSLIPPVK-VPKKPEEIE 224

Query: 375 AEIELDYLPAVVSDSSNRIRLANSAYMEMVGQPECLWLDSMATCDAQSKGCGSACKRI 548
            E+E + LP V++DS+N++RLANSAY EMVGQPEC WL SM T D   +  GS+CKRI
Sbjct: 225 EEVESEVLPIVITDSNNKVRLANSAYKEMVGQPECSWLGSMMTSD--GRFAGSSCKRI 280


>ref|XP_002301145.1| predicted protein [Populus trichocarpa] gi|222842871|gb|EEE80418.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  138 bits (347), Expect = 7e-31
 Identities = 86/181 (47%), Positives = 109/181 (60%), Gaps = 1/181 (0%)
 Frame = +3

Query: 9   SSGLGSCLEKSVNLITLPFLPYPSPSVPEVARSVSKLHGVNIYSQFQD-ICDLKLEVETP 185
           +SGL + +  S NL+TLP L   SP+   V  + + +  ++     +D + DL    E P
Sbjct: 122 NSGLENSVTMSSNLVTLPLLQ--SPTTVTVVANQAAVPELSCMEPNRDKVIDLNTVAEFP 179

Query: 186 KEMDLLQNLQATDSASSNSGNGNVITPQAVRPVGSSISVEYIQEGPSLKEPFKCVSKKPE 365
           +E DLLQ LQ   +        NVI PQ +R VGSSIS+  I E PS   P   V KKPE
Sbjct: 180 EEKDLLQQLQVPPT-------NNVIAPQPLRLVGSSISIACISEDPSFI-PLVRVPKKPE 231

Query: 366 EVEAEIELDYLPAVVSDSSNRIRLANSAYMEMVGQPECLWLDSMATCDAQSKGCGSACKR 545
           EVE E+E + LP V+SDS+N++RLANSAY EMVGQPEC WLDSM T D      G +CKR
Sbjct: 232 EVEEEVESEVLPTVISDSNNKVRLANSAYKEMVGQPECSWLDSMMTGDGSF--AGRSCKR 289

Query: 546 I 548
           I
Sbjct: 290 I 290


>ref|XP_004141406.1| PREDICTED: uncharacterized protein LOC101210181 [Cucumis sativus]
           gi|449508215|ref|XP_004163252.1| PREDICTED:
           uncharacterized protein LOC101226673 [Cucumis sativus]
          Length = 370

 Score =  134 bits (337), Expect = 9e-30
 Identities = 84/174 (48%), Positives = 105/174 (60%), Gaps = 5/174 (2%)
 Frame = +3

Query: 45  NLITLPFLPYPSPSVPEVARSVSKLHGVNIYSQFQDI---CDLKLEVETPKEMDLLQNLQ 215
           NL+TLP LP  S    E    VS+++ +  + + + +    D  +  E P+E DLLQ LQ
Sbjct: 127 NLVTLPLLPSVSDET-ETTTPVSEINFIKSFDEEKGVEFSVDSSVVSEIPQEKDLLQQLQ 185

Query: 216 ATDSASSNSGNGNVITPQAVRPVGSSISVEYIQEG--PSLKEPFKCVSKKPEEVEAEIEL 389
              S S      NVITP  VRPVGSSI V  I E   P        + KKP+EVE E+E 
Sbjct: 186 CPVSIS------NVITPHPVRPVGSSIRVGCINEAQNPVHSNNTPQLPKKPDEVEKEVES 239

Query: 390 DYLPAVVSDSSNRIRLANSAYMEMVGQPECLWLDSMATCDAQSKGCGSACKRIG 551
           + LPAV+SDS+NR+R+ANSAY EMVGQPECLWLDSM T D + KG     +RIG
Sbjct: 240 EVLPAVISDSNNRVRMANSAYKEMVGQPECLWLDSMVTGDERLKG-----RRIG 288


>ref|XP_002510084.1| conserved hypothetical protein [Ricinus communis]
           gi|223550785|gb|EEF52271.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 363

 Score =  129 bits (325), Expect = 2e-28
 Identities = 83/180 (46%), Positives = 105/180 (58%)
 Frame = +3

Query: 9   SSGLGSCLEKSVNLITLPFLPYPSPSVPEVARSVSKLHGVNIYSQFQDICDLKLEVETPK 188
           SS L + +  + +L+TL  LP   P VP V   V+      + ++ Q I DL    E P+
Sbjct: 122 SSSLNNPVTTNSDLVTLSLLPC-QPPVPVVDNQVTAPEISCMEARRQVIIDLNTVAEIPE 180

Query: 189 EMDLLQNLQATDSASSNSGNGNVITPQAVRPVGSSISVEYIQEGPSLKEPFKCVSKKPEE 368
           E D LQ LQ   +        NVI PQ +RPVGSSISV  + E  +   P   V KKPEE
Sbjct: 181 EKDFLQQLQEPPT-------NNVIAPQPIRPVGSSISVGCVSEDTN-STPQVQVPKKPEE 232

Query: 369 VEAEIELDYLPAVVSDSSNRIRLANSAYMEMVGQPECLWLDSMATCDAQSKGCGSACKRI 548
           VE EIE + LP V+ DS+ ++RLANSAY EMVGQPEC WLDSM   D +    G++CKRI
Sbjct: 233 VEEEIECEALPTVICDSNYKVRLANSAYKEMVGQPECPWLDSMVAGDGRFG--GNSCKRI 290


>ref|XP_002283353.1| PREDICTED: uncharacterized protein LOC100262679 [Vitis vinifera]
          Length = 361

 Score =  129 bits (325), Expect = 2e-28
 Identities = 80/160 (50%), Positives = 102/160 (63%), Gaps = 5/160 (3%)
 Frame = +3

Query: 48  LITLPFLPYPSPSVPEVARSVSKLH--GVNIYSQFQDICDLKLEV---ETPKEMDLLQNL 212
           L+TLP LP P P +P V    + L+  G N+      I DL   V     P+E DLLQ L
Sbjct: 138 LMTLPLLPCPPPQLPVVPNDFNCLNPCGGNV------IFDLNTSVVAARIPEEKDLLQQL 191

Query: 213 QATDSASSNSGNGNVITPQAVRPVGSSISVEYIQEGPSLKEPFKCVSKKPEEVEAEIELD 392
           Q   + ++N     VI+PQ VRP+GSSISV  +++  S   P   + KKPEEVE E+E +
Sbjct: 192 QRAPANTTN-----VISPQPVRPIGSSISVRCMRDDLS-PIPEVQILKKPEEVEEEMESE 245

Query: 393 YLPAVVSDSSNRIRLANSAYMEMVGQPECLWLDSMATCDA 512
            LPAV+SDS+N+IR+ANSAY EMVGQPEC WL+SM TC A
Sbjct: 246 TLPAVISDSNNKIRMANSAYKEMVGQPECPWLNSMVTCGA 285


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