BLASTX nr result

ID: Coptis21_contig00024325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024325
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554757.1| PREDICTED: LOW QUALITY PROTEIN: probable UDP...   201   5e-50
ref|XP_002532660.1| cmp-sialic acid transporter, putative [Ricin...   200   9e-50
ref|XP_002280548.1| PREDICTED: CMP-sialic acid transporter [Viti...   199   2e-49
emb|CAN60247.1| hypothetical protein VITISV_039397 [Vitis vinifera]   199   2e-49
ref|XP_003521799.1| PREDICTED: probable UDP-sugar transporter pr...   199   3e-49

>ref|XP_003554757.1| PREDICTED: LOW QUALITY PROTEIN: probable UDP-sugar transporter
           protein SLC35A4-like [Glycine max]
          Length = 335

 Score =  201 bits (511), Expect = 5e-50
 Identities = 94/113 (83%), Positives = 103/113 (91%)
 Frame = -1

Query: 416 GFENGPWWQRLFNGYNITTWMVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVLS 237
           GFENGPWWQR+FNGY ITTWMVVLNLGSTGLLVSWLMK+ADNIVKVYSTSMAMLLTM+LS
Sbjct: 218 GFENGPWWQRIFNGYTITTWMVVLNLGSTGLLVSWLMKHADNIVKVYSTSMAMLLTMILS 277

Query: 236 VYLFNFKPTLQLFLGIVICMMSLHMYFAPASMLVDLPVAAKTDPESLNNVSVD 78
           ++LFNFKPTLQLFLGI+ICMMSLHMYFAP +ML+D+P   K D E L  VSVD
Sbjct: 278 LFLFNFKPTLQLFLGIIICMMSLHMYFAPPNMLLDMPXTVKPDEEKLIEVSVD 330


>ref|XP_002532660.1| cmp-sialic acid transporter, putative [Ricinus communis]
           gi|223527620|gb|EEF29733.1| cmp-sialic acid transporter,
           putative [Ricinus communis]
          Length = 335

 Score =  200 bits (509), Expect = 9e-50
 Identities = 96/113 (84%), Positives = 102/113 (90%)
 Frame = -1

Query: 416 GFENGPWWQRLFNGYNITTWMVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVLS 237
           GFE GPWWQRLF+GY ITTWMVVLNLG +GLLVSWLMKYADNIVKVYSTSMAMLLTMVLS
Sbjct: 218 GFEKGPWWQRLFSGYTITTWMVVLNLGCSGLLVSWLMKYADNIVKVYSTSMAMLLTMVLS 277

Query: 236 VYLFNFKPTLQLFLGIVICMMSLHMYFAPASMLVDLPVAAKTDPESLNNVSVD 78
           V+LFNF PTLQLFLGI+ICMMSLHMYFAP  MLVDLP   K DPESL +VSV+
Sbjct: 278 VFLFNFSPTLQLFLGIIICMMSLHMYFAPPGMLVDLPSMGKADPESLIDVSVE 330


>ref|XP_002280548.1| PREDICTED: CMP-sialic acid transporter [Vitis vinifera]
           gi|297745398|emb|CBI40478.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  199 bits (506), Expect = 2e-49
 Identities = 94/106 (88%), Positives = 100/106 (94%)
 Frame = -1

Query: 416 GFENGPWWQRLFNGYNITTWMVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVLS 237
           GFE GPWW RLFNGY++TTWMVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVLS
Sbjct: 218 GFEKGPWWHRLFNGYSVTTWMVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVLS 277

Query: 236 VYLFNFKPTLQLFLGIVICMMSLHMYFAPASMLVDLPVAAKTDPES 99
           V+LFNFKPTLQLFLGIVICMMSLHMYFAP +MLVDLP+  K+ PES
Sbjct: 278 VFLFNFKPTLQLFLGIVICMMSLHMYFAPPTMLVDLPLTVKSAPES 323


>emb|CAN60247.1| hypothetical protein VITISV_039397 [Vitis vinifera]
          Length = 392

 Score =  199 bits (506), Expect = 2e-49
 Identities = 94/106 (88%), Positives = 100/106 (94%)
 Frame = -1

Query: 416 GFENGPWWQRLFNGYNITTWMVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVLS 237
           GFE GPWW RLFNGY++TTWMVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVLS
Sbjct: 279 GFEKGPWWHRLFNGYSVTTWMVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVLS 338

Query: 236 VYLFNFKPTLQLFLGIVICMMSLHMYFAPASMLVDLPVAAKTDPES 99
           V+LFNFKPTLQLFLGIVICMMSLHMYFAP +MLVDLP+  K+ PES
Sbjct: 339 VFLFNFKPTLQLFLGIVICMMSLHMYFAPPTMLVDLPLTVKSAPES 384


>ref|XP_003521799.1| PREDICTED: probable UDP-sugar transporter protein SLC35A4-like
           [Glycine max]
          Length = 335

 Score =  199 bits (505), Expect = 3e-49
 Identities = 92/113 (81%), Positives = 103/113 (91%)
 Frame = -1

Query: 416 GFENGPWWQRLFNGYNITTWMVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVLS 237
           GFENGPWWQR+FNGY ITTWMVVLNLGSTGLLVSWLMK+ADNIVKVYSTSMAMLLTM+LS
Sbjct: 218 GFENGPWWQRIFNGYTITTWMVVLNLGSTGLLVSWLMKHADNIVKVYSTSMAMLLTMILS 277

Query: 236 VYLFNFKPTLQLFLGIVICMMSLHMYFAPASMLVDLPVAAKTDPESLNNVSVD 78
           ++LFNFKPTLQLFLGI+ICMMSLHMYFAP ++L+D P+  K D E L  VS+D
Sbjct: 278 LFLFNFKPTLQLFLGIIICMMSLHMYFAPPNLLLDKPLTVKLDEEKLIEVSID 330


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