BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024323
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    56   4e-06
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06
ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis...    55   8e-06

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
 Frame = -2

Query: 257 NDSLHWIESHCSWNPR------VVAFDVGGKEFRTVAPPDYKDSSFLKIAELGGMLGLLR 96
           N +LHW+      NP       VVA D+G +++R V  P+YKD +F    +LG + G L 
Sbjct: 211 NGALHWVVGE---NPESNVANIVVALDLGVEDYREVLQPEYKDKNFY--IDLGVLRGCLC 265

Query: 95  YDRS-KESYLEGWVMKGYGLRESWTKLVIVKE 3
           +  +     ++ W+MK YG++ESWTKL  V +
Sbjct: 266 FLANFLGERVDVWMMKEYGVKESWTKLFSVAQ 297


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
 Frame = -2

Query: 257 NDSLHWIESHC-----SWNPRVVAFDVGGKEFRTVAPPDYKDSSF-LKIAELGGMLGLLR 96
           N ++HW  +       + +  +VAFD+G +EF+ +  PDY  +   + +  LGG L +  
Sbjct: 219 NSAVHWKATVVGKGKENGSDLIVAFDLGAEEFKIIPQPDYSSNEHEMNVGVLGGCLCVFC 278

Query: 95  YDRSKESYLEGWVMKGYGLRESWTKLVIV 9
               K+  +E WVMK YG++ESWT L  V
Sbjct: 279 NKNCKQ--VEIWVMKEYGVKESWTHLCTV 305


>ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449508988|ref|XP_004163461.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 179

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
 Frame = -2

Query: 257 NDSLHWIESH---CSWNPRVVAFDVGGKEFRTVAPPDYKDSSF-LKIAELGGMLGLL-RY 93
           N++LHW+ S          VVAFD+G   F  +  P+  D    + +  LGG L L+  Y
Sbjct: 6   NNALHWVVSENLGMGLADLVVAFDLGTGRFEEIPLPELTDFKCEIHVDVLGGCLCLIANY 65

Query: 92  DRSKESYLEGWVMKGYGLRESWTKLVIVKE 3
           DR +    E WVMK YG++ESW KL+ V +
Sbjct: 66  DRVR---FEVWVMKEYGVQESWMKLLTVSQ 92